[INFO] fetching crate perbase 0.7.3... [INFO] checking perbase-0.7.3 against try#a7a572ce3edd6d476191fbfe92c9c1986e009b34 for pr-87190-3 [INFO] extracting crate perbase 0.7.3 into /workspace/builds/worker-58/source [INFO] validating manifest of crates.io crate perbase 0.7.3 on toolchain a7a572ce3edd6d476191fbfe92c9c1986e009b34 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate perbase 0.7.3 [INFO] finished tweaking crates.io crate perbase 0.7.3 [INFO] tweaked toml for crates.io crate perbase 0.7.3 written to /workspace/builds/worker-58/source/Cargo.toml [INFO] crate crates.io crate perbase 0.7.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded smartstring v0.2.7 [INFO] [stderr] Downloaded getset v0.0.9 [INFO] [stderr] Downloaded bio-types v0.12.0 [INFO] [stderr] Downloaded enum-map-derive v0.4.6 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded enum-map v0.6.4 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded array-macro v1.0.5 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded grep-cli v0.1.6 [INFO] [stderr] Downloaded statrs v0.12.0 [INFO] [stderr] Downloaded noodles v0.1.0 [INFO] [stderr] Downloaded lru_time_cache v0.11.11 [INFO] [stderr] Downloaded rust-htslib v0.36.0 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded bio v0.32.0 [INFO] [stderr] Downloaded triple_accel v0.3.4 [INFO] [stderr] Downloaded hts-sys v1.11.1-fix2 [INFO] [stderr] Downloaded noodles-bgzf v0.1.0 [INFO] [stderr] Downloaded rust-lapper v0.5.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 58ef764a529147fd01e0bd06e8df5aa8c93b294051a1222cc76b43051b7e240e [INFO] running `Command { std: "docker" "start" "-a" "58ef764a529147fd01e0bd06e8df5aa8c93b294051a1222cc76b43051b7e240e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "58ef764a529147fd01e0bd06e8df5aa8c93b294051a1222cc76b43051b7e240e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "58ef764a529147fd01e0bd06e8df5aa8c93b294051a1222cc76b43051b7e240e", kill_on_drop: false }` [INFO] [stdout] 58ef764a529147fd01e0bd06e8df5aa8c93b294051a1222cc76b43051b7e240e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a9bf5e1615e6da8f946cbe08ea8e2e891219385757664e356542d761e226a101 [INFO] running `Command { std: "docker" "start" "-a" "a9bf5e1615e6da8f946cbe08ea8e2e891219385757664e356542d761e226a101", kill_on_drop: false }` [INFO] [stderr] Copying to /tmp/fixit [INFO] [stderr] Running `cargo fix --edition` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] note: Switching to Edition 2021 will enable the use of the version 2 feature resolver in Cargo. [INFO] [stderr] This may cause some dependencies to be built with fewer features enabled than previously. [INFO] [stderr] More information about the resolver changes may be found at https://doc.rust-lang.org/nightly/edition-guide/rust-2021/default-cargo-resolver.html [INFO] [stderr] When building the following dependencies, the given features will no longer be used: [INFO] [stderr] [INFO] [stderr] syn v1.0.73 (as host dependency): visit [INFO] [stderr] [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.98 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling serde_derive v1.0.126 [INFO] [stderr] Compiling serde v1.0.126 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Checking regex-syntax v0.6.25 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking tinyvec_macros v0.1.0 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking matches v0.1.8 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking hashbrown v0.11.2 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking array-macro v1.0.5 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Compiling bio v0.32.0 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking termcolor v1.1.2 [INFO] [stderr] Compiling anyhow v1.0.42 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking bytecount v0.6.2 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking triple_accel v0.3.4 [INFO] [stderr] Checking remove_dir_all v0.5.3 [INFO] [stderr] Checking static_assertions v1.1.0 [INFO] [stderr] Checking strum v0.18.0 [INFO] [stderr] Checking lru_time_cache v0.11.11 [INFO] [stderr] Checking unicode-bidi v0.3.5 [INFO] [stderr] Checking log v0.4.14 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Checking form_urlencoded v1.0.1 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking matrixmultiply v0.2.4 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking tinyvec v1.2.0 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling jobserver v0.1.22 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Checking aho-corasick v0.7.18 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling rstest v0.6.4 [INFO] [stderr] Compiling cc v1.0.69 [INFO] [stderr] Checking unicode-normalization v0.1.19 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking getrandom v0.2.3 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking wait-timeout v0.2.0 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.1.1 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking rust-lapper v0.5.1 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling openssl-src v111.15.0+1.1.1k [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking noodles-bgzf v0.1.0 [INFO] [stderr] Checking regex v1.5.4 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand_xorshift v0.2.0 [INFO] [stderr] Checking noodles v0.1.0 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Checking crossbeam-queue v0.2.3 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking rand v0.8.4 [INFO] [stderr] Checking idna v0.2.3 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling openssl-sys v0.9.65 [INFO] [stderr] Compiling curl-sys v0.4.44+curl-7.77.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling hts-sys v1.11.1-fix2 [INFO] [stderr] Checking statrs v0.12.0 [INFO] [stderr] Checking crossbeam v0.7.3 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking url v2.2.2 [INFO] [stderr] Checking tempfile v3.2.0 [INFO] [stderr] Checking rusty-fork v0.3.0 [INFO] [stderr] Checking proptest v0.10.1 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.26 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling snafu-derive v0.6.10 [INFO] [stderr] Compiling structopt-derive v0.4.15 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Checking enum-map v0.6.4 [INFO] [stderr] Checking thiserror v1.0.26 [INFO] [stderr] Checking bio-types v0.12.0 [INFO] [stderr] Checking snafu v0.6.10 [INFO] [stderr] Checking rust-htslib v0.36.0 [INFO] [stderr] Checking bstr v0.2.16 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Checking smartstring v0.2.7 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking globset v0.4.8 [INFO] [stderr] Checking csv v1.1.6 [INFO] [stderr] Checking grep-cli v0.1.6 [INFO] [stderr] Checking structopt v0.3.22 [INFO] [stderr] Checking perbase v0.7.3 (/tmp/fixit) [INFO] [stderr] Migrating src/lib/mod.rs from 2018 edition to 2021 [INFO] [stderr] Migrating src/main.rs from 2018 edition to 2021 [INFO] [stderr] Migrating examples/par_granges_example.rs from 2018 edition to 2021 [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 43.79s [INFO] [stderr] Running `cargo check` to verify 2021 [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Checking perbase v0.7.3 (/tmp/fixit) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2.65s [INFO] running `Command { std: "docker" "inspect" "a9bf5e1615e6da8f946cbe08ea8e2e891219385757664e356542d761e226a101", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a9bf5e1615e6da8f946cbe08ea8e2e891219385757664e356542d761e226a101", kill_on_drop: false }` [INFO] [stdout] a9bf5e1615e6da8f946cbe08ea8e2e891219385757664e356542d761e226a101