[INFO] cloning repository https://github.com/legaultmarc/genepa-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/legaultmarc/genepa-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flegaultmarc%2Fgenepa-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flegaultmarc%2Fgenepa-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4ee2025b9265ff8ae4ea21980678cb8a011f421e
[INFO] checking legaultmarc/genepa-rs against try#a7a572ce3edd6d476191fbfe92c9c1986e009b34 for pr-87190-3
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flegaultmarc%2Fgenepa-rs" "/workspace/builds/worker-13/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-13/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/legaultmarc/genepa-rs on toolchain a7a572ce3edd6d476191fbfe92c9c1986e009b34
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/legaultmarc/genepa-rs
[INFO] finished tweaking git repo https://github.com/legaultmarc/genepa-rs
[INFO] tweaked toml for git repo https://github.com/legaultmarc/genepa-rs written to /workspace/builds/worker-13/source/Cargo.toml
[INFO] crate git repo https://github.com/legaultmarc/genepa-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded num-complex v0.2.1
[INFO] [stderr]   Downloaded ndarray v0.12.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4fbbfd61f030929ae758abe18d27e8c5313720e845b39ceccdf9f89a4f1cfb58
[INFO] running `Command { std: "docker" "start" "-a" "4fbbfd61f030929ae758abe18d27e8c5313720e845b39ceccdf9f89a4f1cfb58", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4fbbfd61f030929ae758abe18d27e8c5313720e845b39ceccdf9f89a4f1cfb58", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4fbbfd61f030929ae758abe18d27e8c5313720e845b39ceccdf9f89a4f1cfb58", kill_on_drop: false }`
[INFO] [stdout] 4fbbfd61f030929ae758abe18d27e8c5313720e845b39ceccdf9f89a4f1cfb58
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1feb29018fbf15abad45ec2cc5444718ea32e552ca15e0fda0c45141fe3b3247
[INFO] running `Command { std: "docker" "start" "-a" "1feb29018fbf15abad45ec2cc5444718ea32e552ca15e0fda0c45141fe3b3247", kill_on_drop: false }`
[INFO] [stderr] Copying to /tmp/fixit
[INFO] [stderr] Running `cargo fix --edition`
[INFO] [stderr]    Compiling num-traits v0.2.6
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling num-complex v0.2.1
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]     Checking either v1.5.2
[INFO] [stderr]     Checking rawpointer v0.1.0
[INFO] [stderr]     Checking itertools v0.7.11
[INFO] [stderr]     Checking genepa_rs v0.1.0 (/tmp/fixit)
[INFO] [stderr]    Migrating src/lib.rs from 2018 edition to 2021
[INFO] [stdout] error: couldn't read src/../test_data/common_extracted_1kg.missing.bed: No such file or directory (os error 2)
[INFO] [stdout]    --> src/plink.rs:386:19
[INFO] [stdout]     |
[INFO] [stdout] 386 |           let bed = include_bytes!(
[INFO] [stdout]     |  ___________________^
[INFO] [stdout] 387 | |             "../test_data/common_extracted_1kg.missing.bed"
[INFO] [stdout] 388 | |         );
[INFO] [stdout]     | |_________^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `include_bytes` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::f32::NAN`
[INFO] [stdout]  --> src/c_api.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::f32::NAN;
[INFO] [stdout]   |     ^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]    --> src/plink.rs:370:9
[INFO] [stdout]     |
[INFO] [stdout] 370 | /         (
[INFO] [stdout] 371 | |             first_3_bytes[0] == 0x6c &&
[INFO] [stdout] 372 | |             first_3_bytes[1] == 0x1b &&
[INFO] [stdout] 373 | |             first_3_bytes[2] == 0x01
[INFO] [stdout] 374 | |         )
[INFO] [stdout]     | |_________^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 370 ~         first_3_bytes[0] == 0x6c &&
[INFO] [stdout] 371 +             first_3_bytes[1] == 0x1b &&
[INFO] [stdout] 372 +             first_3_bytes[2] == 0x01
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error; 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `genepa_rs` due to 2 previous errors; 2 warnings emitted
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr]        Fixed src/plink.rs (1 fix)
[INFO] [stderr]        Fixed src/c_api.rs (1 fix)
[INFO] [stderr]        Fixed src/utils.rs (2 fixes)
[INFO] [stderr] error: build failed
[INFO] [stderr] error: failed to migrate to next edition
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `cargo fix --edition --allow-no-vcs --allow-dirty --frozen --all --all-targets --message-format=json` (exit status: 101)
[INFO] running `Command { std: "docker" "inspect" "1feb29018fbf15abad45ec2cc5444718ea32e552ca15e0fda0c45141fe3b3247", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1feb29018fbf15abad45ec2cc5444718ea32e552ca15e0fda0c45141fe3b3247", kill_on_drop: false }`
[INFO] [stdout] 1feb29018fbf15abad45ec2cc5444718ea32e552ca15e0fda0c45141fe3b3247