[INFO] cloning repository https://github.com/AlbertGevorgyan/seqognize
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/AlbertGevorgyan/seqognize" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAlbertGevorgyan%2Fseqognize", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAlbertGevorgyan%2Fseqognize'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 9dfa91e040276a02ab8401773dd7f722703586b3
[INFO] checking AlbertGevorgyan/seqognize against try#a7a572ce3edd6d476191fbfe92c9c1986e009b34 for pr-87190-3
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAlbertGevorgyan%2Fseqognize" "/workspace/builds/worker-113/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-113/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/AlbertGevorgyan/seqognize on toolchain a7a572ce3edd6d476191fbfe92c9c1986e009b34
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/AlbertGevorgyan/seqognize
[INFO] finished tweaking git repo https://github.com/AlbertGevorgyan/seqognize
[INFO] tweaked toml for git repo https://github.com/AlbertGevorgyan/seqognize written to /workspace/builds/worker-113/source/Cargo.toml
[INFO] crate git repo https://github.com/AlbertGevorgyan/seqognize already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-113/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-113/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6e982ccaf22390135df2eec48e9a7dc3252b37c7e3687e5a45aea1a244b93903
[INFO] running `Command { std: "docker" "start" "-a" "6e982ccaf22390135df2eec48e9a7dc3252b37c7e3687e5a45aea1a244b93903", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6e982ccaf22390135df2eec48e9a7dc3252b37c7e3687e5a45aea1a244b93903", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6e982ccaf22390135df2eec48e9a7dc3252b37c7e3687e5a45aea1a244b93903", kill_on_drop: false }`
[INFO] [stdout] 6e982ccaf22390135df2eec48e9a7dc3252b37c7e3687e5a45aea1a244b93903
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-113/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-113/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d3c422f66f2a66b5a65b731a4757bca2a2869cad5546406b8101019579899503
[INFO] running `Command { std: "docker" "start" "-a" "d3c422f66f2a66b5a65b731a4757bca2a2869cad5546406b8101019579899503", kill_on_drop: false }`
[INFO] [stderr] Copying to /tmp/fixit
[INFO] [stderr] Running `cargo fix --edition`
[INFO] [stderr] note: Switching to Edition 2021 will enable the use of the version 2 feature resolver in Cargo.
[INFO] [stderr] This may cause some dependencies to be built with fewer features enabled than previously.
[INFO] [stderr] More information about the resolver changes may be found at https://doc.rust-lang.org/nightly/edition-guide/rust-2021/default-cargo-resolver.html
[INFO] [stderr] When building the following dependencies, the given features will no longer be used:
[INFO] [stderr] 
[INFO] [stderr]   syn v1.0.46 (as host dependency): visit
[INFO] [stderr] 
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling const_fn v0.4.3
[INFO] [stderr]    Compiling serde v1.0.117
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling syn v1.0.46
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling libc v0.2.80
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]     Checking itoa v0.4.6
[INFO] [stderr]    Compiling ndarray v0.10.14
[INFO] [stderr]     Checking rawpointer v0.1.0
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling serde_json v1.0.59
[INFO] [stderr]    Compiling serde_derive v1.0.117
[INFO] [stderr]     Checking unicode-width v0.1.8
[INFO] [stderr]     Checking same-file v1.0.6
[INFO] [stderr]     Checking half v1.6.0
[INFO] [stderr]     Checking regex-syntax v0.6.21
[INFO] [stderr]     Checking array2d v0.2.1
[INFO] [stderr]     Checking oorandom v11.1.2
[INFO] [stderr]     Checking itertools v0.7.11
[INFO] [stderr]    Compiling proc-macro2 v1.0.24
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]     Checking walkdir v2.3.1
[INFO] [stderr]    Compiling num-traits v0.2.12
[INFO] [stderr]    Compiling crossbeam-utils v0.8.0
[INFO] [stderr]    Compiling memoffset v0.5.6
[INFO] [stderr]    Compiling rayon v1.5.0
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]     Checking clap v2.33.3
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]    Compiling quote v1.0.7
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]    Compiling cast v0.2.3
[INFO] [stderr]     Checking regex-automata v0.1.9
[INFO] [stderr]     Checking regex v1.4.2
[INFO] [stderr]     Checking num-complex v0.1.43
[INFO] [stderr]     Checking num-traits v0.1.43
[INFO] [stderr]     Checking plotters v0.2.15
[INFO] [stderr]     Checking crossbeam-epoch v0.9.0
[INFO] [stderr]     Checking crossbeam-channel v0.5.0
[INFO] [stderr]     Checking criterion-plot v0.4.3
[INFO] [stderr]     Checking crossbeam-deque v0.8.0
[INFO] [stderr]     Checking rayon-core v1.9.0
[INFO] [stderr]     Checking bstr v0.2.14
[INFO] [stderr]     Checking serde_cbor v0.11.1
[INFO] [stderr]     Checking csv v1.1.3
[INFO] [stderr]     Checking tinytemplate v1.1.0
[INFO] [stderr]    Compiling delegate v0.4.3
[INFO] [stderr]     Checking seqognize v0.1.0 (/tmp/fixit)
[INFO] [stderr]    Migrating src/lib.rs from 2018 edition to 2021
[INFO] [stderr]        Fixed src/nt_aligner.rs (3 fixes)
[INFO] [stdout] warning: function is never used: `from_elements`
[INFO] [stdout]   --> src/matrix.rs:59:8
[INFO] [stdout]    |
[INFO] [stdout] 59 | pub fn from_elements<V>(elements: &[V]) -> Matrix
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Migrating src/main.rs from 2018 edition to 2021
[INFO] [stdout] warning: function is never used: `from_elements`
[INFO] [stdout]   --> src/matrix.rs:59:8
[INFO] [stdout]    |
[INFO] [stdout] 59 | pub fn from_elements<V>(elements: &[V]) -> Matrix
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `from`
[INFO] [stdout]   --> src/alignment.rs:17:12
[INFO] [stdout]    |
[INFO] [stdout] 17 |     pub fn from(subject: &str, reference: &str, score: FScore) -> Self {
[INFO] [stdout]    |            ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Checking criterion v0.3.3
[INFO] [stderr]    Migrating benches/nt_alignment.rs from 2018 edition to 2021
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 37.48s
[INFO] [stderr] Running `cargo check` to verify 2021
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Checking seqognize v0.1.0 (/tmp/fixit)
[INFO] [stdout] warning: function is never used: `from_elements`
[INFO] [stdout]   --> src/matrix.rs:59:8
[INFO] [stdout]    |
[INFO] [stdout] 59 | pub fn from_elements<V>(elements: &[V]) -> Matrix
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function is never used: `from_elements`
[INFO] [stdout]   --> src/matrix.rs:59:8
[INFO] [stdout]    |
[INFO] [stdout] 59 | pub fn from_elements<V>(elements: &[V]) -> Matrix
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function is never used: `from`
[INFO] [stdout]   --> src/alignment.rs:17:12
[INFO] [stdout]    |
[INFO] [stdout] 17 |     pub fn from(subject: &str, reference: &str, score: FScore) -> Self {
[INFO] [stdout]    |            ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1.75s
[INFO] running `Command { std: "docker" "inspect" "d3c422f66f2a66b5a65b731a4757bca2a2869cad5546406b8101019579899503", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d3c422f66f2a66b5a65b731a4757bca2a2869cad5546406b8101019579899503", kill_on_drop: false }`
[INFO] [stdout] d3c422f66f2a66b5a65b731a4757bca2a2869cad5546406b8101019579899503