[INFO] fetching crate biofile 1.10.3... [INFO] checking biofile-1.10.3 against master#33fdb797f59421c7bbecaa4588ed5d7a31a9494a for pr-87190-3 [INFO] extracting crate biofile 1.10.3 into /workspace/builds/worker-16/source [INFO] validating manifest of crates.io crate biofile 1.10.3 on toolchain 33fdb797f59421c7bbecaa4588ed5d7a31a9494a [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate biofile 1.10.3 [INFO] finished tweaking crates.io crate biofile 1.10.3 [INFO] tweaked toml for crates.io crate biofile 1.10.3 written to /workspace/builds/worker-16/source/Cargo.toml [INFO] crate crates.io crate biofile 1.10.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-16/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-16/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9563b752eba0606ab50ae17fb8cb94728a1eece3b71ef9dac6cb849160b97107 [INFO] running `Command { std: "docker" "start" "-a" "9563b752eba0606ab50ae17fb8cb94728a1eece3b71ef9dac6cb849160b97107", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9563b752eba0606ab50ae17fb8cb94728a1eece3b71ef9dac6cb849160b97107", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9563b752eba0606ab50ae17fb8cb94728a1eece3b71ef9dac6cb849160b97107", kill_on_drop: false }` [INFO] [stdout] 9563b752eba0606ab50ae17fb8cb94728a1eece3b71ef9dac6cb849160b97107 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-16/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-16/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] be78d6439d4e966bdb875e6627f711a216de3ff8d5cf60455749de20c81b9592 [INFO] running `Command { std: "docker" "start" "-a" "be78d6439d4e966bdb875e6627f711a216de3ff8d5cf60455749de20c81b9592", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v0.1.6 [INFO] [stderr] Compiling libc v0.2.62 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Compiling getrandom v0.1.12 [INFO] [stderr] Compiling arrayvec v0.4.11 [INFO] [stderr] Checking nodrop v0.1.13 [INFO] [stderr] Checking ppv-lite86 v0.2.5 [INFO] [stderr] Checking scopeguard v1.0.0 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Compiling rayon-core v1.6.0 [INFO] [stderr] Compiling bitflags v1.2.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking remove_dir_all v0.5.2 [INFO] [stderr] Compiling memoffset v0.5.1 [INFO] [stderr] Checking crossbeam-utils v0.6.6 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Checking rand_jitter v0.1.4 [INFO] [stderr] Checking rand_hc v0.1.0 [INFO] [stderr] Checking rand_isaac v0.1.1 [INFO] [stderr] Checking rand_xorshift v0.1.1 [INFO] [stderr] Checking crossbeam-queue v0.1.2 [INFO] [stderr] Checking c2-chacha v0.2.2 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling num-bigint v0.2.3 [INFO] [stderr] Compiling num-rational v0.2.2 [INFO] [stderr] Compiling num-iter v0.1.39 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Checking crossbeam-epoch v0.7.2 [INFO] [stderr] Checking num_cpus v1.10.1 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking crossbeam-deque v0.7.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.1 [INFO] [stderr] Checking rand v0.7.2 [INFO] [stderr] Checking rayon v1.2.0 [INFO] [stderr] Checking tempfile v3.1.0 [INFO] [stderr] Checking num v0.2.0 [INFO] [stderr] Checking program-flow v0.1.3 [INFO] [stderr] Checking math v0.10.0 [INFO] [stderr] Checking ndarray-rand v0.9.0 [INFO] [stderr] Checking biofile v1.10.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/bed.rs:282:17 [INFO] [stdout] | [INFO] [stdout] 282 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/bed.rs:326:17 [INFO] [stdout] | [INFO] [stdout] 326 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the feature `bufreader_seek_relative` has been stable since 1.53.0 and no longer requires an attribute to enable [INFO] [stdout] --> src/lib.rs:1:12 [INFO] [stdout] | [INFO] [stdout] 1 | #![feature(bufreader_seek_relative)] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(stable_features)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/peak_file.rs:132:33 [INFO] [stdout] | [INFO] [stdout] 132 | s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 132 - s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] 132 + s => panic!("unrecognized strand symbol {}", s), [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/plink_bed/plink_snps.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | / format!( [INFO] [stdout] 18 | | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | | num_snps, [INFO] [stdout] 20 | | bytes.len() * 4 [INFO] [stdout] 21 | | ) [INFO] [stdout] | |_____________^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 17 ~ [INFO] [stdout] 18 | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | num_snps, [INFO] [stdout] 20 | bytes.len() * 4 [INFO] [stdout] 21 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/bedgraph.rs:196:13 [INFO] [stdout] | [INFO] [stdout] 196 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `val` [INFO] [stdout] --> src/traits/trait_impl.rs:45:41 [INFO] [stdout] | [INFO] [stdout] 45 | let (chrom, start, end, val) = [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stdout] ... [INFO] [stdout] 55 | test_data_line!("chr1", 2, 10, None::); [INFO] [stdout] | -------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `val` [INFO] [stdout] --> src/traits/trait_impl.rs:45:41 [INFO] [stdout] | [INFO] [stdout] 45 | let (chrom, start, end, val) = [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stdout] ... [INFO] [stdout] 56 | test_data_line!("chrX", 200, 201, Some(19i32)); [INFO] [stdout] | ----------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `val` [INFO] [stdout] --> src/traits/trait_impl.rs:45:41 [INFO] [stdout] | [INFO] [stdout] 45 | let (chrom, start, end, val) = [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stdout] ... [INFO] [stdout] 57 | test_data_line!("chrY", 100, 4000, Some(-2i32)); [INFO] [stdout] | ------------------------------------------------ in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the feature `bufreader_seek_relative` has been stable since 1.53.0 and no longer requires an attribute to enable [INFO] [stdout] --> src/lib.rs:1:12 [INFO] [stdout] | [INFO] [stdout] 1 | #![feature(bufreader_seek_relative)] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(stable_features)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/peak_file.rs:132:33 [INFO] [stdout] | [INFO] [stdout] 132 | s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 132 - s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] 132 + s => panic!("unrecognized strand symbol {}", s), [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/plink_bed/plink_snps.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | / format!( [INFO] [stdout] 18 | | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | | num_snps, [INFO] [stdout] 20 | | bytes.len() * 4 [INFO] [stdout] 21 | | ) [INFO] [stdout] | |_____________^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 17 ~ [INFO] [stdout] 18 | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | num_snps, [INFO] [stdout] 20 | bytes.len() * 4 [INFO] [stdout] 21 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 11.11s [INFO] running `Command { std: "docker" "inspect" "be78d6439d4e966bdb875e6627f711a216de3ff8d5cf60455749de20c81b9592", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "be78d6439d4e966bdb875e6627f711a216de3ff8d5cf60455749de20c81b9592", kill_on_drop: false }` [INFO] [stdout] be78d6439d4e966bdb875e6627f711a216de3ff8d5cf60455749de20c81b9592