[INFO] cloning repository https://github.com/wheaton5/het_snp_kmers [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/wheaton5/het_snp_kmers" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 81bddfa5537686072c13ab3780d45ca0c99b9b0a [INFO] checking wheaton5/het_snp_kmers against master#33fdb797f59421c7bbecaa4588ed5d7a31a9494a for pr-87190-3 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers" "/workspace/builds/worker-92/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-92/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/wheaton5/het_snp_kmers on toolchain 33fdb797f59421c7bbecaa4588ed5d7a31a9494a [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/wheaton5/het_snp_kmers [INFO] finished tweaking git repo https://github.com/wheaton5/het_snp_kmers [INFO] tweaked toml for git repo https://github.com/wheaton5/het_snp_kmers written to /workspace/builds/worker-92/source/Cargo.toml [INFO] crate git repo https://github.com/wheaton5/het_snp_kmers already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded wyhash v0.5.0 [INFO] [stderr] Downloaded boomphf v0.5.9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-92/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-92/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1c786ebd2fcfadc757a080a81265123df18d16afc15bd68a4248a69e8997884e [INFO] running `Command { std: "docker" "start" "-a" "1c786ebd2fcfadc757a080a81265123df18d16afc15bd68a4248a69e8997884e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1c786ebd2fcfadc757a080a81265123df18d16afc15bd68a4248a69e8997884e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1c786ebd2fcfadc757a080a81265123df18d16afc15bd68a4248a69e8997884e", kill_on_drop: false }` [INFO] [stdout] 1c786ebd2fcfadc757a080a81265123df18d16afc15bd68a4248a69e8997884e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-92/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-92/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+33fdb797f59421c7bbecaa4588ed5d7a31a9494a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d5aabec5609fed48bc08cdd9166150df040cfe9742e4746faec358131577d2a5 [INFO] running `Command { std: "docker" "start" "-a" "d5aabec5609fed48bc08cdd9166150df040cfe9742e4746faec358131577d2a5", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.62 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling 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Checking smallvec v1.6.1 [INFO] [stderr] Checking strsim v0.6.0 [INFO] [stderr] Checking bitflags v0.9.1 [INFO] [stderr] Checking fnv v1.0.6 [INFO] [stderr] Checking itertools v0.10.0 [INFO] [stderr] Checking wyhash v0.5.0 [INFO] [stderr] Checking textwrap v0.9.0 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Checking c2-chacha v0.2.2 [INFO] [stderr] Checking hashbrown v0.1.8 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.2 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Checking clap v2.27.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.1 [INFO] [stderr] Checking rand v0.7.2 [INFO] [stderr] Checking crossbeam-epoch v0.9.3 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking num v0.3.1 [INFO] [stderr] Checking boomphf v0.5.9 [INFO] [stderr] Checking debruijn v0.3.2 (https://github.com/10XGenomics/rust-debruijn.git#f6e9188a) [INFO] [stderr] Checking het_snp_kmers v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `debruijn::kmer::*` [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use debruijn::kmer::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Write` [INFO] [stdout] --> src/main.rs:17:5 [INFO] [stdout] | [INFO] [stdout] 17 | use std::io::Write; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::error::Error` [INFO] [stdout] --> src/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::error::Error; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::cmp::min` [INFO] [stdout] --> src/main.rs:29:5 [INFO] [stdout] | [INFO] [stdout] 29 | use std::cmp::min; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn::kmer::*` [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use debruijn::kmer::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Write` [INFO] [stdout] --> src/main.rs:17:5 [INFO] [stdout] | [INFO] [stdout] 17 | use std::io::Write; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::error::Error` [INFO] [stdout] --> src/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::error::Error; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::cmp::min` [INFO] [stdout] --> src/main.rs:29:5 [INFO] [stdout] | [INFO] [stdout] 29 | use std::cmp::min; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn` [INFO] [stdout] --> src/main.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use debruijn::*; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmers` [INFO] [stdout] --> src/main.rs:33:10 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmer_pairs` [INFO] [stdout] --> src/main.rs:33:21 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `kmer_u64` [INFO] [stdout] --> src/main.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn` [INFO] [stdout] --> src/main.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use debruijn::*; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmers` [INFO] [stdout] --> src/main.rs:33:10 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmer_pairs` [INFO] [stdout] --> src/main.rs:33:21 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `kmer_u64` [INFO] [stdout] --> src/main.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 22.85s [INFO] running `Command { std: "docker" "inspect" "d5aabec5609fed48bc08cdd9166150df040cfe9742e4746faec358131577d2a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d5aabec5609fed48bc08cdd9166150df040cfe9742e4746faec358131577d2a5", kill_on_drop: false }` [INFO] [stdout] d5aabec5609fed48bc08cdd9166150df040cfe9742e4746faec358131577d2a5