[INFO] fetching crate mcrt 0.3.0... [INFO] checking mcrt-0.3.0 against master#dfd7b8d03fb93d0e03147d28b3be6d93260fa94d for pr-87050 [INFO] extracting crate mcrt 0.3.0 into /workspace/builds/worker-1/source [INFO] validating manifest of crates.io crate mcrt 0.3.0 on toolchain dfd7b8d03fb93d0e03147d28b3be6d93260fa94d [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+dfd7b8d03fb93d0e03147d28b3be6d93260fa94d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate mcrt 0.3.0 [INFO] finished tweaking crates.io crate mcrt 0.3.0 [INFO] tweaked toml for crates.io crate mcrt 0.3.0 written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate crates.io crate mcrt 0.3.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+dfd7b8d03fb93d0e03147d28b3be6d93260fa94d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+dfd7b8d03fb93d0e03147d28b3be6d93260fa94d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 009d7ee09cfcadacfa7e8163568d6c5e6c7dfad56b4445c9a1413a44458137b1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "009d7ee09cfcadacfa7e8163568d6c5e6c7dfad56b4445c9a1413a44458137b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "009d7ee09cfcadacfa7e8163568d6c5e6c7dfad56b4445c9a1413a44458137b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "009d7ee09cfcadacfa7e8163568d6c5e6c7dfad56b4445c9a1413a44458137b1", kill_on_drop: false }` [INFO] [stdout] 009d7ee09cfcadacfa7e8163568d6c5e6c7dfad56b4445c9a1413a44458137b1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+dfd7b8d03fb93d0e03147d28b3be6d93260fa94d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a07f0a46485c07f0921370cd0aa119384e0b5bf7e680c85e810ed898a9600f13 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "a07f0a46485c07f0921370cd0aa119384e0b5bf7e680c85e810ed898a9600f13", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Checking either v1.6.0 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Checking ppv-lite86 v0.2.9 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling paste v1.0.3 [INFO] [stderr] Compiling physical_constants v0.3.0 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling crossbeam-utils v0.8.0 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling generic-array v0.14.4 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Checking typenum v1.12.0 [INFO] [stderr] Checking bitflags v1.2.1 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking getrandom v0.1.15 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking terminal_size v0.1.15 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking crossbeam-epoch v0.9.0 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking regex v1.4.2 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand_pcg v0.2.1 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking noisy_float v0.1.13 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking console v0.13.0 [INFO] [stderr] Checking num-rational v0.3.2 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Checking rand_distr v0.3.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Compiling pest_generator v2.1.3 [INFO] [stderr] Checking ndarray-parallel v0.9.1 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-3a856165a084bfe8/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x56287d174970 - std::backtrace_rs::backtrace::libunwind::trace::h706b838f5bbd876b [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x56287d174970 - std::backtrace_rs::backtrace::trace_unsynchronized::hc15f29ae7822b7b8 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x56287d174970 - std::sys_common::backtrace::_print_fmt::h7c580c971f91926c [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x56287d174970 - ::fmt::h2a772198c4032452 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x56287d192ecc - core::fmt::write::h9a6d9c74526a6c1b [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x56287d171d85 - std::io::Write::write_fmt::h00f38d9eb2c32e02 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/io/mod.rs:1663:15 [INFO] [stderr] 6: 0x56287d1769db - std::sys_common::backtrace::_print::h5b3c171e6f864ae4 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x56287d1769db - std::sys_common::backtrace::print::h93b9e9ed2a98e611 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x56287d1769db - std::panicking::default_hook::{{closure}}::hd8da92bb68d520c5 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x56287d1764b1 - std::panicking::default_hook::hdbc8b2951c5afbab [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x56287d1770a4 - std::panicking::rust_panic_with_hook::h8a4c841655926f4e [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x56287cfa3613 - std::panicking::begin_panic::{{closure}}::h704773e85287551d [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x56287cf9e759 - std::sys_common::backtrace::__rust_end_short_backtrace::h1bb2a0effa8ed52b [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x56287cfa3549 - std::panicking::begin_panic::hc18ed230657216d0 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x56287cf73db7 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h01eef2fa5fffdee3 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x56287cf755db - build_script_build::main::h66f7b633d3ff0d4e [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x56287cf7934b - core::ops::function::FnOnce::call_once::h0fea7572554ead72 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x56287cf7fa5e - std::sys_common::backtrace::__rust_begin_short_backtrace::h2ec751ffb2551fcc [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x56287cf7df51 - std::rt::lang_start::{{closure}}::h3d6c8543f02d96b0 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x56287d1775aa - core::ops::function::impls:: for &F>::call_once::hcbe5785d54a49ce2 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x56287d1775aa - std::panicking::try::do_call::h1c15e7ee8563c29d [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x56287d1775aa - std::panicking::try::hb8b07cef009cb4fc [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x56287d1775aa - std::panic::catch_unwind::h65a8efbe596bcbb1 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x56287d1775aa - std::rt::lang_start_internal::{{closure}}::h66ded7ab0f18e9fb [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x56287d1775aa - std::panicking::try::do_call::h29cafa65efb3f3f3 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:401:40 [INFO] [stderr] 25: 0x56287d1775aa - std::panicking::try::h412fc5378b4dbfc4 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panicking.rs:365:19 [INFO] [stderr] 26: 0x56287d1775aa - std::panic::catch_unwind::h555def6aac5bf192 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/panic.rs:434:14 [INFO] [stderr] 27: 0x56287d1775aa - std::rt::lang_start_internal::hfff48202d7fee6e3 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x56287cf7df20 - std::rt::lang_start::h2deee01a32d48465 [INFO] [stderr] at /rustc/dfd7b8d03fb93d0e03147d28b3be6d93260fa94d/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x56287cf76acc - main [INFO] [stderr] 30: 0x7f161ce560b3 - __libc_start_main [INFO] [stderr] 31: 0x56287cf6ef2e - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "a07f0a46485c07f0921370cd0aa119384e0b5bf7e680c85e810ed898a9600f13", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a07f0a46485c07f0921370cd0aa119384e0b5bf7e680c85e810ed898a9600f13", kill_on_drop: false }` [INFO] [stdout] a07f0a46485c07f0921370cd0aa119384e0b5bf7e680c85e810ed898a9600f13