[INFO] cloning repository https://github.com/guertinlab/kmer_mask_em [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/kmer_mask_em" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c1ae4fc642bd6330c9db7a4cf31f9b304ff6a874 [INFO] testing guertinlab/kmer_mask_em against try#ecabaf78506b7a4668d42dc20268c086b93f0fad for pr-87041 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em" "/workspace/builds/worker-15/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-15/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/guertinlab/kmer_mask_em on toolchain ecabaf78506b7a4668d42dc20268c086b93f0fad [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/guertinlab/kmer_mask_em [INFO] finished tweaking git repo https://github.com/guertinlab/kmer_mask_em [INFO] tweaked toml for git repo https://github.com/guertinlab/kmer_mask_em written to /workspace/builds/worker-15/source/Cargo.toml [INFO] crate git repo https://github.com/guertinlab/kmer_mask_em already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded tabwriter v1.0.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9cf5554ba0d736098949edfcd11bf580b31cbf88d65ac162d401a157f79f65ef [INFO] running `Command { std: "docker" "start" "-a" "9cf5554ba0d736098949edfcd11bf580b31cbf88d65ac162d401a157f79f65ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9cf5554ba0d736098949edfcd11bf580b31cbf88d65ac162d401a157f79f65ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9cf5554ba0d736098949edfcd11bf580b31cbf88d65ac162d401a157f79f65ef", kill_on_drop: false }` [INFO] [stdout] 9cf5554ba0d736098949edfcd11bf580b31cbf88d65ac162d401a157f79f65ef [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4c7dcdfcc07bbaeb07f7a9c4531b69c09fb9d36a2a3843fcfdfd5b2f8a2274a5 [INFO] running `Command { std: "docker" "start" "-a" "4c7dcdfcc07bbaeb07f7a9c4531b69c09fb9d36a2a3843fcfdfd5b2f8a2274a5", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libc v0.2.21 [INFO] [stderr] Compiling regex-syntax v0.4.0 [INFO] [stderr] Compiling lazy_static v0.2.4 [INFO] [stderr] Compiling unicode-width v0.1.4 [INFO] [stderr] Compiling rustc-serialize v0.3.23 [INFO] [stderr] Compiling unreachable v0.1.1 [INFO] [stderr] Compiling tabwriter v1.0.3 [INFO] [stderr] Compiling memchr v1.0.1 [INFO] [stderr] Compiling thread-id v3.0.0 [INFO] [stderr] Compiling rand v0.3.15 [INFO] [stderr] Compiling num_cpus v1.3.0 [INFO] [stderr] Compiling thread_local v0.3.3 [INFO] [stderr] Compiling aho-corasick v0.6.3 [INFO] [stderr] Compiling deque v0.3.1 [INFO] [stderr] Compiling regex v0.2.1 [INFO] [stderr] Compiling rayon v0.6.0 [INFO] [stderr] Compiling docopt v0.7.0 [INFO] [stderr] Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated macro `RustcDecodable`: rustc-serialize is deprecated and no longer supported [INFO] [stdout] --> src/main.rs:429:17 [INFO] [stdout] | [INFO] [stdout] 429 | #[derive(Debug, RustcDecodable)] [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 14.82s [INFO] running `Command { std: "docker" "inspect" "4c7dcdfcc07bbaeb07f7a9c4531b69c09fb9d36a2a3843fcfdfd5b2f8a2274a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4c7dcdfcc07bbaeb07f7a9c4531b69c09fb9d36a2a3843fcfdfd5b2f8a2274a5", kill_on_drop: false }` [INFO] [stdout] 4c7dcdfcc07bbaeb07f7a9c4531b69c09fb9d36a2a3843fcfdfd5b2f8a2274a5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 424f4ff7076df6b16fe79bc18f430b0814abc0a7912b6e0d7e145d37aa2c3800 [INFO] running `Command { std: "docker" "start" "-a" "424f4ff7076df6b16fe79bc18f430b0814abc0a7912b6e0d7e145d37aa2c3800", kill_on_drop: false }` [INFO] [stderr] Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated macro `RustcDecodable`: rustc-serialize is deprecated and no longer supported [INFO] [stdout] --> src/main.rs:429:17 [INFO] [stdout] | [INFO] [stdout] 429 | #[derive(Debug, RustcDecodable)] [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.78s [INFO] running `Command { std: "docker" "inspect" "424f4ff7076df6b16fe79bc18f430b0814abc0a7912b6e0d7e145d37aa2c3800", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "424f4ff7076df6b16fe79bc18f430b0814abc0a7912b6e0d7e145d37aa2c3800", kill_on_drop: false }` [INFO] [stdout] 424f4ff7076df6b16fe79bc18f430b0814abc0a7912b6e0d7e145d37aa2c3800 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-15/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 1b6768278d3cd49bc5a4c2f0d28078eb6bd039cbdc26052b3eaee279fad5dde5 [INFO] running `Command { std: "docker" "start" "-a" "1b6768278d3cd49bc5a4c2f0d28078eb6bd039cbdc26052b3eaee279fad5dde5", kill_on_drop: false }` [INFO] [stderr] warning: use of deprecated macro `RustcDecodable`: rustc-serialize is deprecated and no longer supported [INFO] [stderr] --> src/main.rs:429:17 [INFO] [stderr] | [INFO] [stderr] 429 | #[derive(Debug, RustcDecodable)] [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/kmermask_em-67edcca6583f0049) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "1b6768278d3cd49bc5a4c2f0d28078eb6bd039cbdc26052b3eaee279fad5dde5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1b6768278d3cd49bc5a4c2f0d28078eb6bd039cbdc26052b3eaee279fad5dde5", kill_on_drop: false }` [INFO] [stdout] 1b6768278d3cd49bc5a4c2f0d28078eb6bd039cbdc26052b3eaee279fad5dde5