[INFO] cloning repository https://github.com/IMTMarburg/mbf_bam [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/IMTMarburg/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 7b70a70ee0d7c4e8eb11f2e3220c8173b0ac01c9 [INFO] testing IMTMarburg/mbf_bam against try#ecabaf78506b7a4668d42dc20268c086b93f0fad for pr-87041 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-7/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain ecabaf78506b7a4668d42dc20268c086b93f0fad [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded indoc v0.3.6 [INFO] [stderr] Downloaded rand_distr v0.4.1 [INFO] [stderr] Downloaded getset v0.0.9 [INFO] [stderr] Downloaded enum-map-derive v0.4.6 [INFO] [stderr] Downloaded enum-map v0.6.4 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded array-macro v1.0.5 [INFO] [stderr] Downloaded fs-utils v1.1.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded pyo3-build-config v0.14.1 [INFO] [stderr] Downloaded bio v0.37.0 [INFO] [stderr] Downloaded statrs v0.14.0 [INFO] [stderr] Downloaded triple_accel v0.3.4 [INFO] [stderr] Downloaded bio-types v0.12.0 [INFO] [stderr] Downloaded pyo3-macros-backend v0.14.1 [INFO] [stderr] Downloaded pyo3 v0.14.1 [INFO] [stderr] Downloaded pyo3-macros v0.14.1 [INFO] [stderr] Downloaded lzma-sys v0.1.17 [INFO] [stderr] Downloaded indoc-impl v0.3.6 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded rust-htslib v0.38.2 [INFO] [stderr] Downloaded hts-sys v2.0.1 [INFO] [stderr] Downloaded openssl-src v111.12.0+1.1.1h [INFO] [stderr] Downloaded curl-sys v0.4.36+curl-7.71.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6a3fb2ba64093e3cf39d8584fb7f45e79ce14598ad893c28c524f34894331cba [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6a3fb2ba64093e3cf39d8584fb7f45e79ce14598ad893c28c524f34894331cba", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6a3fb2ba64093e3cf39d8584fb7f45e79ce14598ad893c28c524f34894331cba", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6a3fb2ba64093e3cf39d8584fb7f45e79ce14598ad893c28c524f34894331cba", kill_on_drop: false }` [INFO] [stdout] 6a3fb2ba64093e3cf39d8584fb7f45e79ce14598ad893c28c524f34894331cba [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] e424adf96c7b1fc4cf8d2a67b95e1f045c475ef770b0d6daaf16ef1ff3e0689c [INFO] running `Command { std: "docker" "start" "-a" "e424adf96c7b1fc4cf8d2a67b95e1f045c475ef770b0d6daaf16ef1ff3e0689c", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling proc-macro2 v0.4.27 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.30 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling pyo3-build-config v0.14.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling once_cell v1.8.0 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling typenum v1.13.0 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling autocfg v0.1.2 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling matches v0.1.8 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling smallvec v0.6.9 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling smallvec v1.4.2 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Compiling failure_derive v0.1.5 [INFO] [stderr] Compiling fixedbitset v0.2.0 [INFO] [stderr] Compiling array-macro v1.0.5 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling itoa v0.4.3 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling bio v0.37.0 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling adler32 v1.0.4 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling triple_accel v0.3.4 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling strum v0.20.0 [INFO] [stderr] Compiling fnv v1.0.6 [INFO] [stderr] Compiling lock_api v0.4.1 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling instant v0.1.7 [INFO] [stderr] Compiling matrixmultiply v0.3.1 [INFO] [stderr] Compiling matrixmultiply v0.2.4 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Compiling unicode-bidi v0.3.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling unicode-normalization v0.1.8 [INFO] [stderr] Compiling backtrace v0.3.15 [INFO] [stderr] Compiling miniz_oxide v0.3.5 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling num_cpus v1.10.0 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling parking_lot_core v0.8.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling flate2 v1.0.13 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling parking_lot v0.11.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Compiling pyo3 v0.14.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling url v2.1.1 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling approx v0.4.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling rand_distr v0.4.1 [INFO] [stderr] Compiling simba v0.4.0 [INFO] [stderr] Compiling synstructure v0.10.1 [INFO] [stderr] Compiling serde_derive v1.0.90 [INFO] [stderr] Compiling cc v1.0.35 [INFO] [stderr] Compiling pyo3-macros-backend v0.14.1 [INFO] [stderr] Compiling openssl-src v111.12.0+1.1.1h [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling openssl-sys v0.9.65 [INFO] [stderr] Compiling curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling backtrace-sys v0.1.28 [INFO] [stderr] Compiling hts-sys v2.0.1 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling thiserror-impl v1.0.21 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling pyo3-macros v0.14.1 [INFO] [stderr] Compiling indoc v0.3.6 [INFO] [stderr] Compiling enum-map v0.6.4 [INFO] [stderr] Compiling nalgebra v0.26.2 [INFO] [stderr] Compiling thiserror v1.0.21 [INFO] [stderr] Compiling bio-types v0.12.0 [INFO] [stderr] Compiling bstr v0.2.15 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling statrs v0.14.0 [INFO] [stderr] Compiling rust-htslib v0.38.2 [INFO] [stderr] Compiling mbf_bam v0.1.8 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/count_reads/counters.rs:398:13 [INFO] [stdout] | [INFO] [stdout] 398 | bam_in.fetch(bam::FetchDefinition::All); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 6m 30s [INFO] running `Command { std: "docker" "inspect" "e424adf96c7b1fc4cf8d2a67b95e1f045c475ef770b0d6daaf16ef1ff3e0689c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e424adf96c7b1fc4cf8d2a67b95e1f045c475ef770b0d6daaf16ef1ff3e0689c", kill_on_drop: false }` [INFO] [stdout] e424adf96c7b1fc4cf8d2a67b95e1f045c475ef770b0d6daaf16ef1ff3e0689c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] acd67f7212613631f8d1e8109373c7c8a8fb88e268fcfca7f9c1982c3f61fe6a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "acd67f7212613631f8d1e8109373c7c8a8fb88e268fcfca7f9c1982c3f61fe6a", kill_on_drop: false }` [INFO] [stderr] Compiling mbf_bam v0.1.8 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/count_reads/counters.rs:398:13 [INFO] [stdout] | [INFO] [stdout] 398 | bam_in.fetch(bam::FetchDefinition::All); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 12.26s [INFO] running `Command { std: "docker" "inspect" "acd67f7212613631f8d1e8109373c7c8a8fb88e268fcfca7f9c1982c3f61fe6a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "acd67f7212613631f8d1e8109373c7c8a8fb88e268fcfca7f9c1982c3f61fe6a", kill_on_drop: false }` [INFO] [stdout] acd67f7212613631f8d1e8109373c7c8a8fb88e268fcfca7f9c1982c3f61fe6a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+ecabaf78506b7a4668d42dc20268c086b93f0fad" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 0018a732c8058b434e46c51567faa6857022efa4aa0c3057194e11679efe9123 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "0018a732c8058b434e46c51567faa6857022efa4aa0c3057194e11679efe9123", kill_on_drop: false }` [INFO] [stderr] warning: unused `Result` that must be used [INFO] [stderr] --> src/count_reads/counters.rs:398:13 [INFO] [stderr] | [INFO] [stderr] 398 | bam_in.fetch(bam::FetchDefinition::All); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.23s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/mbf_bam-67b9526c6d5f46c5) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test bam_ext::tests::spliced_reads ... FAILED [INFO] [stdout] test bam_ext::tests::test_introns ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- bam_ext::tests::spliced_reads stdout ---- [INFO] [stdout] thread 'bam_ext::tests::spliced_reads' panicked at 'called `Result::unwrap()` on an `Err` value: FileNotFound { path: "../mbf_sampledata/src/mbf_sampledata/data/mbf_bam/spliced_reads.bam" }', src/bam_ext.rs:53:10 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5650c462db80 - std::backtrace_rs::backtrace::libunwind::trace::h706b838f5bbd876b [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x5650c462db80 - std::backtrace_rs::backtrace::trace_unsynchronized::hc15f29ae7822b7b8 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5650c462db80 - std::sys_common::backtrace::_print_fmt::h7c580c971f91926c [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x5650c462db80 - ::fmt::h2a772198c4032452 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x5650c465035c - core::fmt::write::h9a6d9c74526a6c1b [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/fmt/mod.rs:1115:17 [INFO] [stdout] 5: 0x5650c462ab85 - std::io::Write::write_fmt::h583dff5009d01a9f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/io/mod.rs:1663:15 [INFO] [stdout] 6: 0x5650c462fceb - std::sys_common::backtrace::_print::h5b3c171e6f864ae4 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x5650c462fceb - std::sys_common::backtrace::print::h93b9e9ed2a98e611 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x5650c462fceb - std::panicking::default_hook::{{closure}}::hd8da92bb68d520c5 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x5650c462f7fc - std::panicking::default_hook::hdbc8b2951c5afbab [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x5650c46303b4 - std::panicking::rust_panic_with_hook::h8a4c841655926f4e [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x5650c462fe97 - std::panicking::begin_panic_handler::{{closure}}::h471b6bc74904b7b0 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x5650c462e07c - std::sys_common::backtrace::__rust_end_short_backtrace::h309f5c707f29932f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x5650c462fdf9 - rust_begin_unwind [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x5650c43565d1 - core::panicking::panic_fmt::hcf5f6d96e1dd7099 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x5650c43566c3 - core::result::unwrap_failed::he898b02f57993c42 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/result.rs:1355:5 [INFO] [stdout] 16: 0x5650c4357baf - core::result::Result::unwrap::h898cd41409fc913d [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/result.rs:1037:23 [INFO] [stdout] 17: 0x5650c4357de2 - mbf_bam::bam_ext::tests::spliced_reads::h41c8a4885ed3334b [INFO] [stdout] at /opt/rustwide/workdir/src/bam_ext.rs:50:23 [INFO] [stdout] 18: 0x5650c4357d8a - mbf_bam::bam_ext::tests::spliced_reads::{{closure}}::h47faf4b3b822a553 [INFO] [stdout] at /opt/rustwide/workdir/src/bam_ext.rs:49:5 [INFO] [stdout] 19: 0x5650c43666be - core::ops::function::FnOnce::call_once::h3eac1a388cbdf2a3 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x5650c4390263 - core::ops::function::FnOnce::call_once::h99a97b0ff983bd25 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x5650c4390263 - test::__rust_begin_short_backtrace::h8fe0d26ed1584e50 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:577:5 [INFO] [stdout] 22: 0x5650c438ecf0 - as core::ops::function::FnOnce>::call_once::he6b90e352f394d8f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 23: 0x5650c438ecf0 - as core::ops::function::FnOnce<()>>::call_once::h1c05475e029700b8 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:347:9 [INFO] [stdout] 24: 0x5650c438ecf0 - std::panicking::try::do_call::he6de943476ae628a [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:401:40 [INFO] [stdout] 25: 0x5650c438ecf0 - std::panicking::try::ha21937b8feb06f89 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:365:19 [INFO] [stdout] 26: 0x5650c438ecf0 - std::panic::catch_unwind::ha79830b3325c9fa6 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:434:14 [INFO] [stdout] 27: 0x5650c438ecf0 - test::run_test_in_process::h1ab180b83ee2d5b5 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:600:18 [INFO] [stdout] 28: 0x5650c438ecf0 - test::run_test::run_test_inner::{{closure}}::h8258ffe088f187a1 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:492:39 [INFO] [stdout] 29: 0x5650c43682b2 - test::run_test::run_test_inner::{{closure}}::hc697b214abd32bc6 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:519:37 [INFO] [stdout] 30: 0x5650c43682b2 - std::sys_common::backtrace::__rust_begin_short_backtrace::h64de0d3f894854a9 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 31: 0x5650c436bf08 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h1fd98fc86e533ece [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/thread/mod.rs:476:17 [INFO] [stdout] 32: 0x5650c436bf08 - as core::ops::function::FnOnce<()>>::call_once::h4e2a7abf702e4cfd [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:347:9 [INFO] [stdout] 33: 0x5650c436bf08 - std::panicking::try::do_call::h4496392321a3c8c0 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:401:40 [INFO] [stdout] 34: 0x5650c436bf08 - std::panicking::try::hf1e14258e04e8e9a [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:365:19 [INFO] [stdout] 35: 0x5650c436bf08 - std::panic::catch_unwind::hb72c3777cd55642f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:434:14 [INFO] [stdout] 36: 0x5650c436bf08 - std::thread::Builder::spawn_unchecked::{{closure}}::h2d7915a5910e148e [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/thread/mod.rs:475:30 [INFO] [stdout] 37: 0x5650c436bf08 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h83fd2f1ef5be797c [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x5650c4634f47 - as core::ops::function::FnOnce>::call_once::ha8b1d5a0092467fc [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 39: 0x5650c4634f47 - as core::ops::function::FnOnce>::call_once::h4b9f24ec4e8a879e [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 40: 0x5650c4634f47 - std::sys::unix::thread::Thread::new::thread_start::h2a0e98fbc4ab4c32 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys/unix/thread.rs:72:17 [INFO] [stdout] 41: 0x7f9d15f00609 - start_thread [INFO] [stdout] 42: 0x7f9d15cd0293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- bam_ext::tests::test_introns stdout ---- [INFO] [stdout] thread 'bam_ext::tests::test_introns' panicked at 'called `Result::unwrap()` on an `Err` value: FileNotFound { path: "../mbf_sampledata/src/mbf_sampledata/data/mbf_bam/spliced_reads.bam" }', src/bam_ext.rs:387:10 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5650c462db80 - std::backtrace_rs::backtrace::libunwind::trace::h706b838f5bbd876b [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x5650c462db80 - std::backtrace_rs::backtrace::trace_unsynchronized::hc15f29ae7822b7b8 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5650c462db80 - std::sys_common::backtrace::_print_fmt::h7c580c971f91926c [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x5650c462db80 - ::fmt::h2a772198c4032452 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x5650c465035c - core::fmt::write::h9a6d9c74526a6c1b [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/fmt/mod.rs:1115:17 [INFO] [stdout] 5: 0x5650c462ab85 - std::io::Write::write_fmt::h583dff5009d01a9f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/io/mod.rs:1663:15 [INFO] [stdout] 6: 0x5650c462fceb - std::sys_common::backtrace::_print::h5b3c171e6f864ae4 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x5650c462fceb - std::sys_common::backtrace::print::h93b9e9ed2a98e611 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x5650c462fceb - std::panicking::default_hook::{{closure}}::hd8da92bb68d520c5 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x5650c462f7fc - std::panicking::default_hook::hdbc8b2951c5afbab [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x5650c46303b4 - std::panicking::rust_panic_with_hook::h8a4c841655926f4e [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x5650c462fe97 - std::panicking::begin_panic_handler::{{closure}}::h471b6bc74904b7b0 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x5650c462e07c - std::sys_common::backtrace::__rust_end_short_backtrace::h309f5c707f29932f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x5650c462fdf9 - rust_begin_unwind [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x5650c43565d1 - core::panicking::panic_fmt::hcf5f6d96e1dd7099 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x5650c43566c3 - core::result::unwrap_failed::he898b02f57993c42 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/result.rs:1355:5 [INFO] [stdout] 16: 0x5650c4357baf - core::result::Result::unwrap::h898cd41409fc913d [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/result.rs:1037:23 [INFO] [stdout] 17: 0x5650c435e3e2 - mbf_bam::bam_ext::tests::test_introns::ha361ce262aebe040 [INFO] [stdout] at /opt/rustwide/workdir/src/bam_ext.rs:384:23 [INFO] [stdout] 18: 0x5650c435e38a - mbf_bam::bam_ext::tests::test_introns::{{closure}}::he542178ff59f0c75 [INFO] [stdout] at /opt/rustwide/workdir/src/bam_ext.rs:383:5 [INFO] [stdout] 19: 0x5650c43666fe - core::ops::function::FnOnce::call_once::h7cdd645762dbbc76 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x5650c4390263 - core::ops::function::FnOnce::call_once::h99a97b0ff983bd25 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x5650c4390263 - test::__rust_begin_short_backtrace::h8fe0d26ed1584e50 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:577:5 [INFO] [stdout] 22: 0x5650c438ecf0 - as core::ops::function::FnOnce>::call_once::he6b90e352f394d8f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 23: 0x5650c438ecf0 - as core::ops::function::FnOnce<()>>::call_once::h1c05475e029700b8 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:347:9 [INFO] [stdout] 24: 0x5650c438ecf0 - std::panicking::try::do_call::he6de943476ae628a [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:401:40 [INFO] [stdout] 25: 0x5650c438ecf0 - std::panicking::try::ha21937b8feb06f89 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:365:19 [INFO] [stdout] 26: 0x5650c438ecf0 - std::panic::catch_unwind::ha79830b3325c9fa6 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:434:14 [INFO] [stdout] 27: 0x5650c438ecf0 - test::run_test_in_process::h1ab180b83ee2d5b5 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:600:18 [INFO] [stdout] 28: 0x5650c438ecf0 - test::run_test::run_test_inner::{{closure}}::h8258ffe088f187a1 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:492:39 [INFO] [stdout] 29: 0x5650c43682b2 - test::run_test::run_test_inner::{{closure}}::hc697b214abd32bc6 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/test/src/lib.rs:519:37 [INFO] [stdout] 30: 0x5650c43682b2 - std::sys_common::backtrace::__rust_begin_short_backtrace::h64de0d3f894854a9 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 31: 0x5650c436bf08 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h1fd98fc86e533ece [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/thread/mod.rs:476:17 [INFO] [stdout] 32: 0x5650c436bf08 - as core::ops::function::FnOnce<()>>::call_once::h4e2a7abf702e4cfd [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:347:9 [INFO] [stdout] 33: 0x5650c436bf08 - std::panicking::try::do_call::h4496392321a3c8c0 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:401:40 [INFO] [stdout] 34: 0x5650c436bf08 - std::panicking::try::hf1e14258e04e8e9a [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panicking.rs:365:19 [INFO] [stdout] 35: 0x5650c436bf08 - std::panic::catch_unwind::hb72c3777cd55642f [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/panic.rs:434:14 [INFO] [stdout] 36: 0x5650c436bf08 - std::thread::Builder::spawn_unchecked::{{closure}}::h2d7915a5910e148e [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/thread/mod.rs:475:30 [INFO] [stdout] 37: 0x5650c436bf08 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h83fd2f1ef5be797c [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x5650c4634f47 - as core::ops::function::FnOnce>::call_once::ha8b1d5a0092467fc [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 39: 0x5650c4634f47 - as core::ops::function::FnOnce>::call_once::h4b9f24ec4e8a879e [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 40: 0x5650c4634f47 - std::sys::unix::thread::Thread::new::thread_start::h2a0e98fbc4ab4c32 [INFO] [stdout] at /rustc/ecabaf78506b7a4668d42dc20268c086b93f0fad/library/std/src/sys/unix/thread.rs:72:17 [INFO] [stdout] 41: 0x7f9d15f00609 - start_thread [INFO] [stdout] 42: 0x7f9d15cd0293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] bam_ext::tests::spliced_reads [INFO] [stdout] bam_ext::tests::test_introns [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.17s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "0018a732c8058b434e46c51567faa6857022efa4aa0c3057194e11679efe9123", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0018a732c8058b434e46c51567faa6857022efa4aa0c3057194e11679efe9123", kill_on_drop: false }` [INFO] [stdout] 0018a732c8058b434e46c51567faa6857022efa4aa0c3057194e11679efe9123