[INFO] fetching crate heme 0.3.2... [INFO] testing heme-0.3.2 against master#432e145bd5a974c5b6f4dd9b352891bd7502b69d for pr-87041 [INFO] extracting crate heme 0.3.2 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate heme 0.3.2 on toolchain 432e145bd5a974c5b6f4dd9b352891bd7502b69d [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate heme 0.3.2 [INFO] finished tweaking crates.io crate heme 0.3.2 [INFO] tweaked toml for crates.io crate heme 0.3.2 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate crates.io crate heme 0.3.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3eef8d63756a444c5608b62f791044437ff3299400496f1b451488e0ac0b0a59 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3eef8d63756a444c5608b62f791044437ff3299400496f1b451488e0ac0b0a59", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3eef8d63756a444c5608b62f791044437ff3299400496f1b451488e0ac0b0a59", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3eef8d63756a444c5608b62f791044437ff3299400496f1b451488e0ac0b0a59", kill_on_drop: false }` [INFO] [stdout] 3eef8d63756a444c5608b62f791044437ff3299400496f1b451488e0ac0b0a59 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fc91b85e7b8ed9468d32c525a4b526806f56fa9389c282f94fbdacd5ddfd5923 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "fc91b85e7b8ed9468d32c525a4b526806f56fa9389c282f94fbdacd5ddfd5923", kill_on_drop: false }` [INFO] [stderr] Compiling heme v0.3.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/sampling.rs:20:29 [INFO] [stdout] | [INFO] [stdout] 20 | pub components: Vec>, [INFO] [stdout] | ^^^^ help: use `dyn`: `dyn Move` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/io.rs:97:46 [INFO] [stdout] | [INFO] [stdout] 97 | pub fn run(config: Config) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `protocol_name` [INFO] [stdout] --> src/sampling.rs:4:21 [INFO] [stdout] | [INFO] [stdout] 4 | pub fn get_protocol(protocol_name: &str) -> Protocol { [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_protocol_name` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `pose` [INFO] [stdout] --> src/sampling.rs:50:21 [INFO] [stdout] | [INFO] [stdout] 50 | fn apply(&self, pose: &mut Pose) { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_pose` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `a1` [INFO] [stdout] --> src/scoring.rs:24:39 [INFO] [stdout] | [INFO] [stdout] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_a1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `a2` [INFO] [stdout] --> src/scoring.rs:24:50 [INFO] [stdout] | [INFO] [stdout] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_a2` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `atoms` [INFO] [stdout] --> src/conformation.rs:52:5 [INFO] [stdout] | [INFO] [stdout] 52 | atoms: Vec, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `residue_name` [INFO] [stdout] --> src/conformation.rs:53:5 [INFO] [stdout] | [INFO] [stdout] 53 | residue_name: String, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `residue_index` [INFO] [stdout] --> src/conformation.rs:54:5 [INFO] [stdout] | [INFO] [stdout] 54 | residue_index: i32, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.70s [INFO] running `Command { std: "docker" "inspect" "fc91b85e7b8ed9468d32c525a4b526806f56fa9389c282f94fbdacd5ddfd5923", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fc91b85e7b8ed9468d32c525a4b526806f56fa9389c282f94fbdacd5ddfd5923", kill_on_drop: false }` [INFO] [stdout] fc91b85e7b8ed9468d32c525a4b526806f56fa9389c282f94fbdacd5ddfd5923 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 95ea47980be5fcae2c98b4aa5f1fb94c8073df7c66ef9a71400024a663ad4210 [INFO] running `Command { std: "docker" "start" "-a" "95ea47980be5fcae2c98b4aa5f1fb94c8073df7c66ef9a71400024a663ad4210", kill_on_drop: false }` [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/sampling.rs:20:29 [INFO] [stdout] | [INFO] [stdout] 20 | pub components: Vec>, [INFO] [stdout] | ^^^^ help: use `dyn`: `dyn Move` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling heme v0.3.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/io.rs:97:46 [INFO] [stdout] | [INFO] [stdout] 97 | pub fn run(config: Config) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `protocol_name` [INFO] [stdout] --> src/sampling.rs:4:21 [INFO] [stdout] | [INFO] [stdout] 4 | pub fn get_protocol(protocol_name: &str) -> Protocol { [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_protocol_name` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `pose` [INFO] [stdout] --> src/sampling.rs:50:21 [INFO] [stdout] | [INFO] [stdout] 50 | fn apply(&self, pose: &mut Pose) { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_pose` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `a1` [INFO] [stdout] --> src/scoring.rs:24:39 [INFO] [stdout] | [INFO] [stdout] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_a1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `a2` [INFO] [stdout] --> src/scoring.rs:24:50 [INFO] [stdout] | [INFO] [stdout] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_a2` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `atoms` [INFO] [stdout] --> src/conformation.rs:52:5 [INFO] [stdout] | [INFO] [stdout] 52 | atoms: Vec, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `residue_name` [INFO] [stdout] --> src/conformation.rs:53:5 [INFO] [stdout] | [INFO] [stdout] 53 | residue_name: String, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `residue_index` [INFO] [stdout] --> src/conformation.rs:54:5 [INFO] [stdout] | [INFO] [stdout] 54 | residue_index: i32, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/sampling.rs:20:29 [INFO] [stdout] | [INFO] [stdout] 20 | pub components: Vec>, [INFO] [stdout] | ^^^^ help: use `dyn`: `dyn Move` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/io.rs:97:46 [INFO] [stdout] | [INFO] [stdout] 97 | pub fn run(config: Config) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `protocol_name` [INFO] [stdout] --> src/sampling.rs:4:21 [INFO] [stdout] | [INFO] [stdout] 4 | pub fn get_protocol(protocol_name: &str) -> Protocol { [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_protocol_name` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `pose` [INFO] [stdout] --> src/sampling.rs:50:21 [INFO] [stdout] | [INFO] [stdout] 50 | fn apply(&self, pose: &mut Pose) { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_pose` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `a1` [INFO] [stdout] --> src/scoring.rs:24:39 [INFO] [stdout] | [INFO] [stdout] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_a1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `a2` [INFO] [stdout] --> src/scoring.rs:24:50 [INFO] [stdout] | [INFO] [stdout] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_a2` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `atoms` [INFO] [stdout] --> src/conformation.rs:52:5 [INFO] [stdout] | [INFO] [stdout] 52 | atoms: Vec, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `residue_name` [INFO] [stdout] --> src/conformation.rs:53:5 [INFO] [stdout] | [INFO] [stdout] 53 | residue_name: String, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `residue_index` [INFO] [stdout] --> src/conformation.rs:54:5 [INFO] [stdout] | [INFO] [stdout] 54 | residue_index: i32, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `H` should have a snake case name [INFO] [stdout] --> src/io.rs:152:12 [INFO] [stdout] | [INFO] [stdout] 152 | fn H(l: &f64) -> f64 { [INFO] [stdout] | ^ help: convert the identifier to snake case: `h` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 10 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.80s [INFO] running `Command { std: "docker" "inspect" "95ea47980be5fcae2c98b4aa5f1fb94c8073df7c66ef9a71400024a663ad4210", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "95ea47980be5fcae2c98b4aa5f1fb94c8073df7c66ef9a71400024a663ad4210", kill_on_drop: false }` [INFO] [stdout] 95ea47980be5fcae2c98b4aa5f1fb94c8073df7c66ef9a71400024a663ad4210 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 6a0c4045c4e6305dc4f5db78d2a75c3ebe9f76662f2fc797d17e05d6b43bef4d [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6a0c4045c4e6305dc4f5db78d2a75c3ebe9f76662f2fc797d17e05d6b43bef4d", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] running 4 tests [INFO] [stderr] --> src/sampling.rs:20:29 [INFO] [stdout] test io::tests::test_lennard_jones_atom_loading ... ok [INFO] [stderr] | [INFO] [stdout] test io::tests::test_new_atoms_testy ... ok [INFO] [stderr] 20 | pub components: Vec>, [INFO] [stdout] test io::tests::test_pdb_parsing ... ok [INFO] [stderr] | ^^^^ help: use `dyn`: `dyn Move` [INFO] [stdout] test io::tests::test_entropy_function ... ok [INFO] [stderr] | [INFO] [stdout] [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] [INFO] [stderr] = note: for more information, see issue #80165 [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/io.rs:97:46 [INFO] [stderr] | [INFO] [stderr] 97 | pub fn run(config: Config) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see issue #80165 [INFO] [stderr] [INFO] [stderr] warning: unused variable: `protocol_name` [INFO] [stderr] --> src/sampling.rs:4:21 [INFO] [stderr] | [INFO] [stderr] 4 | pub fn get_protocol(protocol_name: &str) -> Protocol { [INFO] [stderr] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_protocol_name` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pose` [INFO] [stderr] --> src/sampling.rs:50:21 [INFO] [stderr] | [INFO] [stderr] 50 | fn apply(&self, pose: &mut Pose) { [INFO] [stderr] | ^^^^ help: if this is intentional, prefix it with an underscore: `_pose` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `a1` [INFO] [stderr] --> src/scoring.rs:24:39 [INFO] [stderr] | [INFO] [stderr] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_a1` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `a2` [INFO] [stderr] --> src/scoring.rs:24:50 [INFO] [stderr] | [INFO] [stderr] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_a2` [INFO] [stderr] [INFO] [stderr] warning: field is never read: `atoms` [INFO] [stderr] --> src/conformation.rs:52:5 [INFO] [stderr] | [INFO] [stderr] 52 | atoms: Vec, [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field is never read: `residue_name` [INFO] [stderr] --> src/conformation.rs:53:5 [INFO] [stderr] | [INFO] [stderr] 53 | residue_name: String, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: field is never read: `residue_index` [INFO] [stderr] --> src/conformation.rs:54:5 [INFO] [stderr] | [INFO] [stderr] 54 | residue_index: i32, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 9 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/sampling.rs:20:29 [INFO] [stderr] | [INFO] [stderr] 20 | pub components: Vec>, [INFO] [stderr] | ^^^^ help: use `dyn`: `dyn Move` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see issue #80165 [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/io.rs:97:46 [INFO] [stderr] | [INFO] [stderr] 97 | pub fn run(config: Config) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see issue #80165 [INFO] [stderr] [INFO] [stderr] warning: unused variable: `protocol_name` [INFO] [stderr] --> src/sampling.rs:4:21 [INFO] [stderr] | [INFO] [stderr] 4 | pub fn get_protocol(protocol_name: &str) -> Protocol { [INFO] [stderr] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_protocol_name` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pose` [INFO] [stderr] --> src/sampling.rs:50:21 [INFO] [stderr] | [INFO] [stderr] 50 | fn apply(&self, pose: &mut Pose) { [INFO] [stderr] | ^^^^ help: if this is intentional, prefix it with an underscore: `_pose` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `a1` [INFO] [stderr] --> src/scoring.rs:24:39 [INFO] [stderr] | [INFO] [stderr] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_a1` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `a2` [INFO] [stderr] --> src/scoring.rs:24:50 [INFO] [stderr] | [INFO] [stderr] 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 { [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_a2` [INFO] [stderr] [INFO] [stderr] warning: field is never read: `atoms` [INFO] [stderr] --> src/conformation.rs:52:5 [INFO] [stderr] | [INFO] [stderr] 52 | atoms: Vec, [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field is never read: `residue_name` [INFO] [stderr] --> src/conformation.rs:53:5 [INFO] [stderr] | [INFO] [stderr] 53 | residue_name: String, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: field is never read: `residue_index` [INFO] [stderr] --> src/conformation.rs:54:5 [INFO] [stderr] | [INFO] [stderr] 54 | residue_index: i32, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `H` should have a snake case name [INFO] [stderr] --> src/io.rs:152:12 [INFO] [stderr] | [INFO] [stderr] 152 | fn H(l: &f64) -> f64 { [INFO] [stderr] | ^ help: convert the identifier to snake case: `h` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 10 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/heme-1b4f49971eda23f6) [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/heme-81d08416ab34fc16) [INFO] [stderr] Doc-tests heme [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test src/conformation.rs - conformation::XYZ (line 18) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.62s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "6a0c4045c4e6305dc4f5db78d2a75c3ebe9f76662f2fc797d17e05d6b43bef4d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6a0c4045c4e6305dc4f5db78d2a75c3ebe9f76662f2fc797d17e05d6b43bef4d", kill_on_drop: false }` [INFO] [stdout] 6a0c4045c4e6305dc4f5db78d2a75c3ebe9f76662f2fc797d17e05d6b43bef4d