[INFO] fetching crate bio-types 0.12.0...
[INFO] testing bio-types-0.12.0 against master#432e145bd5a974c5b6f4dd9b352891bd7502b69d for pr-87041
[INFO] extracting crate bio-types 0.12.0 into /workspace/builds/worker-4/source
[INFO] validating manifest of crates.io crate bio-types 0.12.0 on toolchain 432e145bd5a974c5b6f4dd9b352891bd7502b69d
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bio-types 0.12.0
[INFO] finished tweaking crates.io crate bio-types 0.12.0
[INFO] tweaked toml for crates.io crate bio-types 0.12.0 written to /workspace/builds/worker-4/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 9a010a82ddc56b22328f3c3e7ba9ad1329f968367676556defb27792ecbf9f4f
[INFO] running `Command { std: "docker" "start" "-a" "9a010a82ddc56b22328f3c3e7ba9ad1329f968367676556defb27792ecbf9f4f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9a010a82ddc56b22328f3c3e7ba9ad1329f968367676556defb27792ecbf9f4f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9a010a82ddc56b22328f3c3e7ba9ad1329f968367676556defb27792ecbf9f4f", kill_on_drop: false }`
[INFO] [stdout] 9a010a82ddc56b22328f3c3e7ba9ad1329f968367676556defb27792ecbf9f4f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] da2875203ff8c94cf17f1b4c6d2537435c9cf9ce6b4ea75ebc2d36a4d8812ac3
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "da2875203ff8c94cf17f1b4c6d2537435c9cf9ce6b4ea75ebc2d36a4d8812ac3", kill_on_drop: false }`
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr]    Compiling proc-macro2 v1.0.27
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling memchr v2.4.0
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling syn v1.0.73
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.26
[INFO] [stderr]    Compiling strum_macros v0.20.1
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling thiserror v1.0.26
[INFO] [stderr]    Compiling bio-types v0.12.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 33.51s
[INFO] running `Command { std: "docker" "inspect" "da2875203ff8c94cf17f1b4c6d2537435c9cf9ce6b4ea75ebc2d36a4d8812ac3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "da2875203ff8c94cf17f1b4c6d2537435c9cf9ce6b4ea75ebc2d36a4d8812ac3", kill_on_drop: false }`
[INFO] [stdout] da2875203ff8c94cf17f1b4c6d2537435c9cf9ce6b4ea75ebc2d36a4d8812ac3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c62841f4903f0aee58ccbfd4e71b87d27c2a8c17a77129ac73eb0af053bdb6b8
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "c62841f4903f0aee58ccbfd4e71b87d27c2a8c17a77129ac73eb0af053bdb6b8", kill_on_drop: false }`
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr]    Compiling bio-types v0.12.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 2.89s
[INFO] running `Command { std: "docker" "inspect" "c62841f4903f0aee58ccbfd4e71b87d27c2a8c17a77129ac73eb0af053bdb6b8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c62841f4903f0aee58ccbfd4e71b87d27c2a8c17a77129ac73eb0af053bdb6b8", kill_on_drop: false }`
[INFO] [stdout] c62841f4903f0aee58ccbfd4e71b87d27c2a8c17a77129ac73eb0af053bdb6b8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 2ab59d75bb64b8e4d44a2a051a3ca16fc6dc2dcbe859846aace04f9d30619ec2
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "2ab59d75bb64b8e4d44a2a051a3ca16fc6dc2dcbe859846aace04f9d30619ec2", kill_on_drop: false }`
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.03s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/bio_types-296fc92692857770)
[INFO] [stdout] running 15 tests
[INFO] [stdout] test alignment::tests::test_path ... ok
[INFO] [stdout] test alignment::tests::test_cigar ... ok
[INFO] [stdout] test alignment::tests::test_pretty ... ok
[INFO] [stdout] test annot::contig::tests::first_and_last ... ok
[INFO] [stdout] test annot::pos::tests::loc_impl ... ok
[INFO] [stdout] test annot::pos::tests::pos_accessors ... ok
[INFO] [stdout] test annot::pos::tests::strand_conversion ... ok
[INFO] [stdout] test annot::pos::tests::string_representation ... ok
[INFO] [stdout] test annot::contig::tests::intersection ... ok
[INFO] [stdout] test strand::tests::test_strand ... ok
[INFO] [stdout] test annot::spliced::tests::into_outof ... ok
[INFO] [stdout] test strand::tests::test_req_strand ... ok
[INFO] [stdout] test annot::spliced::tests::intersection ... ok
[INFO] [stdout] test annot::spliced::tests::length_start_to_contig ... ok
[INFO] [stdout] test annot::contig::tests::into_outof ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 15 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests bio-types
[INFO] [stdout] 
[INFO] [stdout] running 17 tests
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos<R, S>::new (line 55) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, S>::new (line 57) ... ok
[INFO] [stdout] test src/alignment.rs - alignment::Alignment::cigar (line 95) ... ok
[INFO] [stdout] test src/sequence.rs - sequence::SequenceReadPairOrientation (line 39) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos<R, ReqStrand>::sub_assign (line 127) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, ReqStrand>::extend_downstream (line 177) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, ReqStrand>::extend_upstream (line 150) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, S>::with_first_length (line 82) ... ok
[INFO] [stdout] test src/annot/spliced.rs - annot::spliced::Spliced<R, S>::new (line 238) ... ok
[INFO] [stdout] test src/annot/spliced.rs - annot::spliced::Spliced (line 208) ... ok
[INFO] [stdout] test src/alignment.rs - alignment::Alignment::path (line 332) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos<R, ReqStrand>::add_assign (line 96) ... ok
[INFO] [stdout] test src/annot/refids.rs - annot::refids::RefIDSet (line 14) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos (line 31) ... ok
[INFO] [stdout] test src/annot/mod.rs - annot (line 30) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig (line 32) ... ok
[INFO] [stdout] test src/strand.rs - strand::ReqStrand::on_strand (line 175) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 17 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 13.85s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "2ab59d75bb64b8e4d44a2a051a3ca16fc6dc2dcbe859846aace04f9d30619ec2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2ab59d75bb64b8e4d44a2a051a3ca16fc6dc2dcbe859846aace04f9d30619ec2", kill_on_drop: false }`
[INFO] [stdout] 2ab59d75bb64b8e4d44a2a051a3ca16fc6dc2dcbe859846aace04f9d30619ec2