[INFO] cloning repository https://github.com/hisakatha/extract-bam-unique-alignment
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/hisakatha/extract-bam-unique-alignment" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhisakatha%2Fextract-bam-unique-alignment", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhisakatha%2Fextract-bam-unique-alignment'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ea8276edeeb0db722d2b36832a19d00841aa91bf
[INFO] testing hisakatha/extract-bam-unique-alignment against master#432e145bd5a974c5b6f4dd9b352891bd7502b69d for pr-87041
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhisakatha%2Fextract-bam-unique-alignment" "/workspace/builds/worker-1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/hisakatha/extract-bam-unique-alignment on toolchain 432e145bd5a974c5b6f4dd9b352891bd7502b69d
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/hisakatha/extract-bam-unique-alignment
[INFO] finished tweaking git repo https://github.com/hisakatha/extract-bam-unique-alignment
[INFO] tweaked toml for git repo https://github.com/hisakatha/extract-bam-unique-alignment written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] crate git repo https://github.com/hisakatha/extract-bam-unique-alignment already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 1ca5ecd899ca6ba71945eb1d5f3574c46f07e3980ba519b98cf750cc3c50cc49
[INFO] running `Command { std: "docker" "start" "-a" "1ca5ecd899ca6ba71945eb1d5f3574c46f07e3980ba519b98cf750cc3c50cc49", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1ca5ecd899ca6ba71945eb1d5f3574c46f07e3980ba519b98cf750cc3c50cc49", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1ca5ecd899ca6ba71945eb1d5f3574c46f07e3980ba519b98cf750cc3c50cc49", kill_on_drop: false }`
[INFO] [stdout] 1ca5ecd899ca6ba71945eb1d5f3574c46f07e3980ba519b98cf750cc3c50cc49
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b965bba8c5b07f8b86d7fc9b9a5130e3f1bd03d4debaa211ec1a076feae4bfb5
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b965bba8c5b07f8b86d7fc9b9a5130e3f1bd03d4debaa211ec1a076feae4bfb5", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.26
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.72
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling matches v0.1.8
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling tinyvec_macros v0.1.0
[INFO] [stderr]    Compiling unicode-segmentation v1.7.1
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling percent-encoding v2.1.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling tinyvec v1.2.0
[INFO] [stderr]    Compiling jobserver v0.1.22
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling unicode-bidi v0.3.5
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling form_urlencoded v1.0.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling cc v1.0.67
[INFO] [stderr]    Compiling heck v0.3.2
[INFO] [stderr]    Compiling openssl-src v111.15.0+1.1.1k
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling unicode-normalization v0.1.17
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling openssl-sys v0.9.63
[INFO] [stderr]    Compiling libz-sys v1.1.3
[INFO] [stderr]    Compiling bzip2-sys v0.1.10+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling curl-sys v0.4.42+curl-7.76.0
[INFO] [stderr]    Compiling hts-sys v1.11.1-fix1
[INFO] [stderr]    Compiling idna v0.2.3
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling url v2.2.2
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.24
[INFO] [stderr]    Compiling strum_macros v0.20.1
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling thiserror v1.0.24
[INFO] [stderr]    Compiling bio-types v0.11.0
[INFO] [stderr]    Compiling rust-htslib v0.36.0
[INFO] [stderr]    Compiling extract_bam_unique_alignment v1.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 44s
[INFO] running `Command { std: "docker" "inspect" "b965bba8c5b07f8b86d7fc9b9a5130e3f1bd03d4debaa211ec1a076feae4bfb5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b965bba8c5b07f8b86d7fc9b9a5130e3f1bd03d4debaa211ec1a076feae4bfb5", kill_on_drop: false }`
[INFO] [stdout] b965bba8c5b07f8b86d7fc9b9a5130e3f1bd03d4debaa211ec1a076feae4bfb5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 464142c4c1e1013084d528bfaa02ca0e77e3abb7f133eb719cec96194cc81daf
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "464142c4c1e1013084d528bfaa02ca0e77e3abb7f133eb719cec96194cc81daf", kill_on_drop: false }`
[INFO] [stderr]    Compiling extract_bam_unique_alignment v1.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.33s
[INFO] running `Command { std: "docker" "inspect" "464142c4c1e1013084d528bfaa02ca0e77e3abb7f133eb719cec96194cc81daf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "464142c4c1e1013084d528bfaa02ca0e77e3abb7f133eb719cec96194cc81daf", kill_on_drop: false }`
[INFO] [stdout] 464142c4c1e1013084d528bfaa02ca0e77e3abb7f133eb719cec96194cc81daf
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+432e145bd5a974c5b6f4dd9b352891bd7502b69d" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 34a1ea23384038cca27ba1a4ca3a5eb6ee54a8d26115284a4e1903886c86479c
[INFO] running `Command { std: "docker" "start" "-a" "34a1ea23384038cca27ba1a4ca3a5eb6ee54a8d26115284a4e1903886c86479c", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.10s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/extract_bam_unique_alignment-ba603e4981fe7d0a)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "34a1ea23384038cca27ba1a4ca3a5eb6ee54a8d26115284a4e1903886c86479c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "34a1ea23384038cca27ba1a4ca3a5eb6ee54a8d26115284a4e1903886c86479c", kill_on_drop: false }`
[INFO] [stdout] 34a1ea23384038cca27ba1a4ca3a5eb6ee54a8d26115284a4e1903886c86479c