[INFO] fetching crate genovo 0.2.3... [INFO] testing genovo-0.2.3 against try#d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2 for pr-86479 [INFO] extracting crate genovo 0.2.3 into /workspace/builds/worker-2/source [INFO] validating manifest of crates.io crate genovo 0.2.3 on toolchain d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate genovo 0.2.3 [INFO] finished tweaking crates.io crate genovo 0.2.3 [INFO] tweaked toml for crates.io crate genovo 0.2.3 written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate crates.io crate genovo 0.2.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded miniz_oxide v0.4.2 [INFO] [stderr] Downloaded flate2 v1.0.17 [INFO] [stderr] Downloaded anyhow v1.0.32 [INFO] [stderr] Downloaded serde_repr v0.1.6 [INFO] [stderr] Downloaded twobit v0.1.1 [INFO] [stderr] Downloaded tabfile v0.2.1 [INFO] [stderr] Downloaded mutexpect v0.2.5 [INFO] [stderr] Downloaded pattern_partition_prediction v0.1.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9859db227f81927a533e505cbafdf0efb3b7bf6fb727e15f9859583902e9edf4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9859db227f81927a533e505cbafdf0efb3b7bf6fb727e15f9859583902e9edf4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9859db227f81927a533e505cbafdf0efb3b7bf6fb727e15f9859583902e9edf4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9859db227f81927a533e505cbafdf0efb3b7bf6fb727e15f9859583902e9edf4", kill_on_drop: false }` [INFO] [stdout] 9859db227f81927a533e505cbafdf0efb3b7bf6fb727e15f9859583902e9edf4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] af6e354b570e021e3ea5aae5dc1e38503b192e54327920bfee6690e5fb3815ae [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "af6e354b570e021e3ea5aae5dc1e38503b192e54327920bfee6690e5fb3815ae", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling proc-macro2 v1.0.23 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.42 [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling anyhow v1.0.32 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling tabfile v0.2.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling twobit v0.1.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling pattern_partition_prediction v0.1.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.1 [INFO] [stderr] Compiling miniz_oxide v0.4.2 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling flate2 v1.0.17 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling bigdecimal v0.2.0 [INFO] [stderr] Compiling thiserror-impl v1.0.20 [INFO] [stderr] Compiling serde_repr v0.1.6 [INFO] [stderr] Compiling thiserror v1.0.20 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling mutexpect v0.2.5 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling genovo v0.2.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 34.85s [INFO] running `Command { std: "docker" "inspect" "af6e354b570e021e3ea5aae5dc1e38503b192e54327920bfee6690e5fb3815ae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "af6e354b570e021e3ea5aae5dc1e38503b192e54327920bfee6690e5fb3815ae", kill_on_drop: false }` [INFO] [stdout] af6e354b570e021e3ea5aae5dc1e38503b192e54327920bfee6690e5fb3815ae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c16d716e2df1727928b6b9d5d642b4820009d56e56fcaf72ead7501bec2e6794 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "c16d716e2df1727928b6b9d5d642b4820009d56e56fcaf72ead7501bec2e6794", kill_on_drop: false }` [INFO] [stderr] Compiling genovo v0.2.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.79s [INFO] running `Command { std: "docker" "inspect" "c16d716e2df1727928b6b9d5d642b4820009d56e56fcaf72ead7501bec2e6794", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c16d716e2df1727928b6b9d5d642b4820009d56e56fcaf72ead7501bec2e6794", kill_on_drop: false }` [INFO] [stdout] c16d716e2df1727928b6b9d5d642b4820009d56e56fcaf72ead7501bec2e6794 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 3693b07014f9e6f51f707a0e3efde22c33350e1ce6692eeb6a9e41ca9f9dd87c [INFO] running `Command { std: "docker" "start" "-a" "3693b07014f9e6f51f707a0e3efde22c33350e1ce6692eeb6a9e41ca9f9dd87c", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.04s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/genovo-0712249c665cdd99) [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test transform::tests::test_region_file_io ... ok [INFO] [stdout] test transform::tests::test_gff3_io ... ok [INFO] [stdout] test counts::tests::test_p_values ... ok [INFO] [stdout] test sample::tests::test_sampled_mutations_io ... ok [INFO] [stdout] test expect::tests::test_expected_mutations_io ... ok [INFO] [stdout] test enumerate::tests::test_possible_mutations_io ... ok [INFO] [stdout] test observed::tests::test_observed_mutations_io ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "3693b07014f9e6f51f707a0e3efde22c33350e1ce6692eeb6a9e41ca9f9dd87c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3693b07014f9e6f51f707a0e3efde22c33350e1ce6692eeb6a9e41ca9f9dd87c", kill_on_drop: false }` [INFO] [stdout] 3693b07014f9e6f51f707a0e3efde22c33350e1ce6692eeb6a9e41ca9f9dd87c