[INFO] cloning repository https://github.com/preiter93/rustpde [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/preiter93/rustpde" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpreiter93%2Frustpde", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpreiter93%2Frustpde'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 9749b8d928c9be858249a8e0560f3b5e22dbf95b [INFO] testing preiter93/rustpde against try#d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2 for pr-86479 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpreiter93%2Frustpde" "/workspace/builds/worker-3/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/preiter93/rustpde on toolchain d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/preiter93/rustpde [INFO] finished tweaking git repo https://github.com/preiter93/rustpde [INFO] tweaked toml for git repo https://github.com/preiter93/rustpde written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate git repo https://github.com/preiter93/rustpde already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating git repository `https://github.com/preiter93/hdf5-interface` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded lapack-sys v0.12.1 [INFO] [stderr] Downloaded criterion v0.3.5 [INFO] [stderr] Downloaded criterion-plot v0.4.4 [INFO] [stderr] Downloaded transpose v0.2.1 [INFO] [stderr] Downloaded cauchy v0.4.0 [INFO] [stderr] Downloaded ndarray v0.15.3 [INFO] [stderr] Downloaded winreg v0.8.0 [INFO] [stderr] Downloaded rustfft v6.0.1 [INFO] [stderr] Downloaded openblas-build v0.1.1 [INFO] [stderr] Downloaded openblas-src v0.10.4 [INFO] [stderr] Downloaded ndrustfft v0.1.4 [INFO] [stderr] Downloaded lax v0.2.0 [INFO] [stderr] Downloaded lapack v0.18.0 [INFO] [stderr] Downloaded ndarray-linalg v0.14.0 [INFO] [stderr] Downloaded cblas-sys v0.1.4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0dc537e8b1891f3454150fb600fc8540cea0399f8c497b94eeafec1ebee82278 [INFO] running `Command { std: "docker" "start" "-a" "0dc537e8b1891f3454150fb600fc8540cea0399f8c497b94eeafec1ebee82278", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0dc537e8b1891f3454150fb600fc8540cea0399f8c497b94eeafec1ebee82278", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0dc537e8b1891f3454150fb600fc8540cea0399f8c497b94eeafec1ebee82278", kill_on_drop: false }` [INFO] [stdout] 0dc537e8b1891f3454150fb600fc8540cea0399f8c497b94eeafec1ebee82278 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b219edf82d53b4465b174ae4ea4fcb29ea8f32dc58a78e49b91ce31aa875fa56 [INFO] running `Command { std: "docker" "start" "-a" "b219edf82d53b4465b174ae4ea4fcb29ea8f32dc58a78e49b91ce31aa875fa56", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.98 [INFO] [stderr] Compiling proc-macro2 v1.0.28 [INFO] [stderr] Compiling syn v1.0.74 [INFO] [stderr] Compiling serde v1.0.127 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling hdf5-types v0.7.1 (https://github.com/preiter93/hdf5-interface?branch=master#82f83ba5) [INFO] [stderr] Compiling strength_reduce v0.2.3 [INFO] [stderr] Compiling ascii v1.0.0 [INFO] [stderr] Compiling hdf5 v0.7.1 (https://github.com/preiter93/hdf5-interface?branch=master#82f83ba5) [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling instant v0.1.10 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling matrixmultiply v0.3.1 [INFO] [stderr] Compiling walkdir v2.3.2 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling dirs-sys v0.3.6 [INFO] [stderr] Compiling cblas-sys v0.1.4 [INFO] [stderr] Compiling parking_lot_core v0.8.3 [INFO] [stderr] Compiling lapack-sys v0.12.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling dirs v3.0.2 [INFO] [stderr] Compiling parking_lot v0.11.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling approx v0.4.0 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling transpose v0.2.1 [INFO] [stderr] Compiling primal-check v0.3.1 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling hdf5-sys v0.7.1 (https://github.com/preiter93/hdf5-interface?branch=master#82f83ba5) [INFO] [stderr] Compiling ndarray v0.15.3 [INFO] [stderr] Compiling cauchy v0.4.0 [INFO] [stderr] Compiling lapack v0.18.0 [INFO] [stderr] Compiling rustfft v6.0.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1 (https://github.com/preiter93/hdf5-interface?branch=master#82f83ba5)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-6725eb4ffb28b2ed/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/git/checkouts/hdf5-interface-54d07fefc7a3fa22/82f83ba/hdf5-rust/hdf5-sys/build.rs:548:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x561d6f704ee0 - std::backtrace_rs::backtrace::libunwind::trace::h99dbb39dca18857d [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x561d6f704ee0 - std::backtrace_rs::backtrace::trace_unsynchronized::h832861927e9cfedf [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x561d6f704ee0 - std::sys_common::backtrace::_print_fmt::h3d18154c77dcf310 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x561d6f704ee0 - ::fmt::he312f4ad5b9bb346 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x561d6f7234ac - core::fmt::write::h9a6d9c74526a6c1b [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x561d6f702485 - std::io::Write::write_fmt::h6aced00850e8186f [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/io/mod.rs:1665:15 [INFO] [stderr] 6: 0x561d6f706f5b - std::sys_common::backtrace::_print::h65d996766de40da4 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x561d6f706f5b - std::sys_common::backtrace::print::h40df9727e635f303 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x561d6f706f5b - std::panicking::default_hook::{{closure}}::hd2da4327dea91a51 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x561d6f706a31 - std::panicking::default_hook::h3d55120ad6ada158 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x561d6f707624 - std::panicking::rust_panic_with_hook::hf85dd0bb545e3b55 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x561d6f52f393 - std::panicking::begin_panic::{{closure}}::h9e0601c718203d46 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x561d6f52efe9 - std::sys_common::backtrace::__rust_end_short_backtrace::h5e8a50bcd73cb3e8 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x561d6f52f2c9 - std::panicking::begin_panic::h65aac921296e9d25 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x561d6f4fee47 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h6e51e5b1d348f89b [INFO] [stderr] at /opt/rustwide/cargo-home/git/checkouts/hdf5-interface-54d07fefc7a3fa22/82f83ba/hdf5-rust/hdf5-sys/build.rs:548:13 [INFO] [stderr] 15: 0x561d6f50066b - build_script_build::main::h0da50e1c788b1db3 [INFO] [stderr] at /opt/rustwide/cargo-home/git/checkouts/hdf5-interface-54d07fefc7a3fa22/82f83ba/hdf5-rust/hdf5-sys/build.rs:646:9 [INFO] [stderr] 16: 0x561d6f50402b - core::ops::function::FnOnce::call_once::h4804397a9406ed50 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x561d6f50cdee - std::sys_common::backtrace::__rust_begin_short_backtrace::h84386eb5d54d986e [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x561d6f50c031 - std::rt::lang_start::{{closure}}::h96f664eded0c6748 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x561d6f707b2a - core::ops::function::impls:: for &F>::call_once::h5a0483c8d4e9c15d [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x561d6f707b2a - std::panicking::try::do_call::h6ad7918f175f6ddd [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x561d6f707b2a - std::panicking::try::hcd5af58f52320690 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x561d6f707b2a - std::panic::catch_unwind::hf1ae33ba67228f1e [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x561d6f707b2a - std::rt::lang_start_internal::{{closure}}::h4a87bc0aa1312dc5 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x561d6f707b2a - std::panicking::try::do_call::h1ade2a52932fc900 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:401:40 [INFO] [stderr] 25: 0x561d6f707b2a - std::panicking::try::h6f4a87ad169e174b [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panicking.rs:365:19 [INFO] [stderr] 26: 0x561d6f707b2a - std::panic::catch_unwind::h043c7f08019f9e2a [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/panic.rs:434:14 [INFO] [stderr] 27: 0x561d6f707b2a - std::rt::lang_start_internal::h82825699ebfd70bd [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x561d6f50c000 - std::rt::lang_start::h9d3f4cb3b8c68b13 [INFO] [stderr] at /rustc/d2e9fff28e244f1ea4927194f1f9b77f93e2ffe2/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x561d6f501b5c - main [INFO] [stderr] 30: 0x7fee1621a0b3 - __libc_start_main [INFO] [stderr] 31: 0x561d6f4f9f0e - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "b219edf82d53b4465b174ae4ea4fcb29ea8f32dc58a78e49b91ce31aa875fa56", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b219edf82d53b4465b174ae4ea4fcb29ea8f32dc58a78e49b91ce31aa875fa56", kill_on_drop: false }` [INFO] [stdout] b219edf82d53b4465b174ae4ea4fcb29ea8f32dc58a78e49b91ce31aa875fa56