[INFO] fetching crate hts 0.1.18... [INFO] testing hts-0.1.18 against master#b70888601af92f6cdc0364abab3446e418b91d36 for pr-86479 [INFO] extracting crate hts 0.1.18 into /workspace/builds/worker-2/source [INFO] validating manifest of crates.io crate hts 0.1.18 on toolchain b70888601af92f6cdc0364abab3446e418b91d36 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hts 0.1.18 [INFO] finished tweaking crates.io crate hts 0.1.18 [INFO] tweaked toml for crates.io crate hts 0.1.18 written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate crates.io crate hts 0.1.18 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7daed4ac805e23e08f728460ee439995e0a856533f1ee0d22d5042dbfa1c2078 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7daed4ac805e23e08f728460ee439995e0a856533f1ee0d22d5042dbfa1c2078", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7daed4ac805e23e08f728460ee439995e0a856533f1ee0d22d5042dbfa1c2078", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7daed4ac805e23e08f728460ee439995e0a856533f1ee0d22d5042dbfa1c2078", kill_on_drop: false }` [INFO] [stdout] 7daed4ac805e23e08f728460ee439995e0a856533f1ee0d22d5042dbfa1c2078 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 87f003b57f858c18279c184c6855fb34b2db5791994d53ac4b58da2179e7efde [INFO] running `Command { std: "docker" "start" "-a" "87f003b57f858c18279c184c6855fb34b2db5791994d53ac4b58da2179e7efde", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling libc v0.2.93 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.6.23 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling regex v1.4.5 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling hts v0.1.18 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hts v0.1.18 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hts-bb61b7fd6818837d/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/hts-87972da6bf626a6d/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/hts-87972da6bf626a6d/out/htslib [INFO] [stderr] + git clone --recursive -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55c5b3fafda0 - std::backtrace_rs::backtrace::libunwind::trace::h99dbb39dca18857d [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55c5b3fafda0 - std::backtrace_rs::backtrace::trace_unsynchronized::h832861927e9cfedf [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55c5b3fafda0 - std::sys_common::backtrace::_print_fmt::h3d18154c77dcf310 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55c5b3fafda0 - ::fmt::he312f4ad5b9bb346 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55c5b3fd45ac - core::fmt::write::h9a6d9c74526a6c1b [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x55c5b3faccd5 - std::io::Write::write_fmt::h6aced00850e8186f [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/io/mod.rs:1665:15 [INFO] [stderr] 6: 0x55c5b3fb201b - std::sys_common::backtrace::_print::h65d996766de40da4 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55c5b3fb201b - std::sys_common::backtrace::print::h40df9727e635f303 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55c5b3fb201b - std::panicking::default_hook::{{closure}}::hd2da4327dea91a51 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55c5b3fb1af1 - std::panicking::default_hook::h3d55120ad6ada158 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55c5b3fb26e4 - std::panicking::rust_panic_with_hook::hf85dd0bb545e3b55 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55c5b3fb2197 - std::panicking::begin_panic_handler::{{closure}}::h736ae969434da9fa [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x55c5b3fb027c - std::sys_common::backtrace::__rust_end_short_backtrace::h6133bb80b1d6c3e0 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55c5b3fb2129 - rust_begin_unwind [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x55c5b3a84861 - core::panicking::panic_fmt::hcf5f6d96e1dd7099 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55c5b3a847ad - core::panicking::panic::hd695e3b1d0dd4ef4 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55c5b3a8597d - build_script_build::build_own_htslib::h2c060f710d4dae9c [INFO] [stderr] at /opt/rustwide/workdir/build.rs:33:5 [INFO] [stderr] 17: 0x55c5b3a85de4 - build_script_build::main::h0d410942eba6c069 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:65:9 [INFO] [stderr] 18: 0x55c5b3a871db - core::ops::function::FnOnce::call_once::hea42cd424c0ee57d [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55c5b3a8697e - std::sys_common::backtrace::__rust_begin_short_backtrace::h46d2016f38b1304a [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55c5b3a87171 - std::rt::lang_start::{{closure}}::h386cf415c151c0c1 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/rt.rs:63:18 [INFO] [stderr] 21: 0x55c5b3fb2bea - core::ops::function::impls:: for &F>::call_once::h5a0483c8d4e9c15d [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55c5b3fb2bea - std::panicking::try::do_call::h6ad7918f175f6ddd [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x55c5b3fb2bea - std::panicking::try::hcd5af58f52320690 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x55c5b3fb2bea - std::panic::catch_unwind::hf1ae33ba67228f1e [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panic.rs:434:14 [INFO] [stderr] 25: 0x55c5b3fb2bea - std::rt::lang_start_internal::{{closure}}::h4a87bc0aa1312dc5 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/rt.rs:45:48 [INFO] [stderr] 26: 0x55c5b3fb2bea - std::panicking::try::do_call::h1ade2a52932fc900 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:401:40 [INFO] [stderr] 27: 0x55c5b3fb2bea - std::panicking::try::h6f4a87ad169e174b [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panicking.rs:365:19 [INFO] [stderr] 28: 0x55c5b3fb2bea - std::panic::catch_unwind::h043c7f08019f9e2a [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/panic.rs:434:14 [INFO] [stderr] 29: 0x55c5b3fb2bea - std::rt::lang_start_internal::h82825699ebfd70bd [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/rt.rs:45:20 [INFO] [stderr] 30: 0x55c5b3a87140 - std::rt::lang_start::h2c4c872e17721033 [INFO] [stderr] at /rustc/b70888601af92f6cdc0364abab3446e418b91d36/library/std/src/rt.rs:62:5 [INFO] [stderr] 31: 0x55c5b3a8646c - main [INFO] [stderr] 32: 0x7f1085a110b3 - __libc_start_main [INFO] [stderr] 33: 0x55c5b3a8505e - _start [INFO] [stderr] 34: 0x0 - [INFO] running `Command { std: "docker" "inspect" "87f003b57f858c18279c184c6855fb34b2db5791994d53ac4b58da2179e7efde", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "87f003b57f858c18279c184c6855fb34b2db5791994d53ac4b58da2179e7efde", kill_on_drop: false }` [INFO] [stdout] 87f003b57f858c18279c184c6855fb34b2db5791994d53ac4b58da2179e7efde