[INFO] fetching crate gchemol-core 0.0.42... [INFO] testing gchemol-core-0.0.42 against master#b70888601af92f6cdc0364abab3446e418b91d36 for pr-86479 [INFO] extracting crate gchemol-core 0.0.42 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate gchemol-core 0.0.42 on toolchain b70888601af92f6cdc0364abab3446e418b91d36 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gchemol-core 0.0.42 [INFO] finished tweaking crates.io crate gchemol-core 0.0.42 [INFO] tweaked toml for crates.io crate gchemol-core 0.0.42 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6c8d7111e2c39ce3ff14ccf592faf23e23a03a2cc7dc43fedd2309a0b887fbea [INFO] running `Command { std: "docker" "start" "-a" "6c8d7111e2c39ce3ff14ccf592faf23e23a03a2cc7dc43fedd2309a0b887fbea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6c8d7111e2c39ce3ff14ccf592faf23e23a03a2cc7dc43fedd2309a0b887fbea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6c8d7111e2c39ce3ff14ccf592faf23e23a03a2cc7dc43fedd2309a0b887fbea", kill_on_drop: false }` [INFO] [stdout] 6c8d7111e2c39ce3ff14ccf592faf23e23a03a2cc7dc43fedd2309a0b887fbea [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4c0b8b40b4c5e20971bed63cd0c01d199dcece854a8b8181ce5861fc3b3f1a0d [INFO] running `Command { std: "docker" "start" "-a" "4c0b8b40b4c5e20971bed63cd0c01d199dcece854a8b8181ce5861fc3b3f1a0d", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.98 [INFO] [stderr] Compiling proc-macro2 v1.0.28 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.74 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling serde_derive v1.0.127 [INFO] [stderr] Compiling serde v1.0.127 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling typenum v1.13.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling serde_json v1.0.66 [INFO] [stderr] Compiling anyhow v1.0.42 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling once_cell v1.8.0 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling itoa v0.4.7 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling matrixmultiply v0.2.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling os_pipe v0.9.2 [INFO] [stderr] Compiling shared_child v0.3.5 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling generic-array v0.13.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling duct v0.13.5 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling rand_distr v0.2.2 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling env_logger v0.8.4 [INFO] [stderr] Compiling pretty_env_logger v0.4.0 [INFO] [stderr] Compiling structopt-derive v0.4.15 [INFO] [stderr] Compiling structopt v0.3.22 [INFO] [stderr] Compiling toml v0.5.8 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling envy v0.4.2 [INFO] [stderr] Compiling bimap v0.4.0 [INFO] [stderr] Compiling alga v0.9.3 [INFO] [stderr] Compiling nalgebra v0.20.0 [INFO] [stderr] Compiling gchemol-gut v0.1.5 [INFO] [stderr] Compiling gchemol-graph v0.1.1 [INFO] [stderr] Compiling vecfx v0.1.2 [INFO] [stderr] Compiling octree v0.1.0 [INFO] [stderr] Compiling gchemol-lattice v0.1.0 [INFO] [stderr] Compiling gchemol-neighbors v0.1.0 [INFO] [stderr] Compiling gchemol-core v0.0.42 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused imports: `Point3`, `Vector3f` [INFO] [stdout] --> src/property.rs:10:19 [INFO] [stdout] | [INFO] [stdout] 10 | use crate::atom::{Point3, Vector3f}; [INFO] [stdout] | ^^^^^^ ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Atom`, `Molecule` [INFO] [stdout] --> src/property.rs:11:13 [INFO] [stdout] | [INFO] [stdout] 11 | use crate::{Atom, Molecule}; [INFO] [stdout] | ^^^^ ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 25s [INFO] running `Command { std: "docker" "inspect" "4c0b8b40b4c5e20971bed63cd0c01d199dcece854a8b8181ce5861fc3b3f1a0d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4c0b8b40b4c5e20971bed63cd0c01d199dcece854a8b8181ce5861fc3b3f1a0d", kill_on_drop: false }` [INFO] [stdout] 4c0b8b40b4c5e20971bed63cd0c01d199dcece854a8b8181ce5861fc3b3f1a0d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d77d07365f56009dfdea5c46037456f01d606d6f7b00bdd12e310a306dc6f063 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d77d07365f56009dfdea5c46037456f01d606d6f7b00bdd12e310a306dc6f063", kill_on_drop: false }` [INFO] [stderr] Compiling gchemol-core v0.0.42 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused imports: `Point3`, `Vector3f` [INFO] [stdout] --> src/property.rs:10:19 [INFO] [stdout] | [INFO] [stdout] 10 | use crate::atom::{Point3, Vector3f}; [INFO] [stdout] | ^^^^^^ ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Atom`, `Molecule` [INFO] [stdout] --> src/property.rs:11:13 [INFO] [stdout] | [INFO] [stdout] 11 | use crate::{Atom, Molecule}; [INFO] [stdout] | ^^^^ ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Point3`, `Vector3f` [INFO] [stdout] --> src/property.rs:10:19 [INFO] [stdout] | [INFO] [stdout] 10 | use crate::atom::{Point3, Vector3f}; [INFO] [stdout] | ^^^^^^ ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Atom`, `Molecule` [INFO] [stdout] --> src/property.rs:11:13 [INFO] [stdout] | [INFO] [stdout] 11 | use crate::{Atom, Molecule}; [INFO] [stdout] | ^^^^ ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 6.11s [INFO] running `Command { std: "docker" "inspect" "d77d07365f56009dfdea5c46037456f01d606d6f7b00bdd12e310a306dc6f063", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d77d07365f56009dfdea5c46037456f01d606d6f7b00bdd12e310a306dc6f063", kill_on_drop: false }` [INFO] [stdout] d77d07365f56009dfdea5c46037456f01d606d6f7b00bdd12e310a306dc6f063 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 04267c0e05ee86e45ff078eebe858b4b8515bfa29e8980468c63723f945ff12f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "04267c0e05ee86e45ff078eebe858b4b8515bfa29e8980468c63723f945ff12f", kill_on_drop: false }` [INFO] [stderr] warning: unused imports: `Point3`, `Vector3f` [INFO] [stdout] [INFO] [stderr] --> src/property.rs:10:19 [INFO] [stdout] running 8 tests [INFO] [stderr] | [INFO] [stderr] 10 | use crate::atom::{Point3, Vector3f}; [INFO] [stderr] | ^^^^^^ ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused imports: `Atom`, `Molecule` [INFO] [stderr] --> src/property.rs:11:13 [INFO] [stderr] | [INFO] [stderr] 11 | use crate::{Atom, Molecule}; [INFO] [stderr] | ^^^^ ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `gchemol-core` (lib) generated 2 warnings [INFO] [stderr] warning: `gchemol-core` (lib test) generated 2 warnings (2 duplicates) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/gchemol_core-9e69f731aa583ee3) [INFO] [stdout] test property::test_atom_store ... ok [INFO] [stdout] test element::test_element ... ok [INFO] [stdout] test data::test_atom_data ... ok [INFO] [stderr] Running tests/basic.rs (/opt/rustwide/target/debug/deps/basic-9dbb67a2f694f0c5) [INFO] [stdout] test formula::test_formula ... ok [INFO] [stdout] test molecule::test ... ok [INFO] [stdout] test atom::test_atom_convert ... ok [INFO] [stdout] test atom::test_atom_basic ... ok [INFO] [stdout] test bond::test_bond ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test test_molecule_basic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running tests/formula.rs (/opt/rustwide/target/debug/deps/formula-8ea9c24e1efc7772) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] Running tests/vector3.rs (/opt/rustwide/target/debug/deps/vector3-cdbd5126475bda1d) [INFO] [stdout] test test_formula ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] Doc-tests gchemol-core [INFO] [stdout] test test_vector3 ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "04267c0e05ee86e45ff078eebe858b4b8515bfa29e8980468c63723f945ff12f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "04267c0e05ee86e45ff078eebe858b4b8515bfa29e8980468c63723f945ff12f", kill_on_drop: false }` [INFO] [stdout] 04267c0e05ee86e45ff078eebe858b4b8515bfa29e8980468c63723f945ff12f