[INFO] fetching crate debruijn 0.3.2... [INFO] testing debruijn-0.3.2 against master#b70888601af92f6cdc0364abab3446e418b91d36 for pr-86479 [INFO] extracting crate debruijn 0.3.2 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate debruijn 0.3.2 on toolchain b70888601af92f6cdc0364abab3446e418b91d36 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate debruijn 0.3.2 [INFO] finished tweaking crates.io crate debruijn 0.3.2 [INFO] tweaked toml for crates.io crate debruijn 0.3.2 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] d93561e8560f90dda028d575230e34485d2b2e2898dc6037aaa47197564a4105 [INFO] running `Command { std: "docker" "start" "-a" "d93561e8560f90dda028d575230e34485d2b2e2898dc6037aaa47197564a4105", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d93561e8560f90dda028d575230e34485d2b2e2898dc6037aaa47197564a4105", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d93561e8560f90dda028d575230e34485d2b2e2898dc6037aaa47197564a4105", kill_on_drop: false }` [INFO] [stdout] d93561e8560f90dda028d575230e34485d2b2e2898dc6037aaa47197564a4105 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 85992aa27702eb4d4fc130c33b546cefc719e039e4df668145e98ef5ab837e57 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "85992aa27702eb4d4fc130c33b546cefc719e039e4df668145e98ef5ab837e57", kill_on_drop: false }` [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling smallvec v1.6.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.2 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling itertools v0.10.1 [INFO] [stderr] Compiling wyhash v0.5.0 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling serde_derive v1.0.127 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling num v0.3.1 [INFO] [stderr] Compiling serde v1.0.127 [INFO] [stderr] Compiling boomphf v0.5.9 [INFO] [stderr] Compiling serde_json v1.0.66 [INFO] [stderr] Compiling debruijn v0.3.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/compression.rs:136:28 [INFO] [stdout] | [INFO] [stdout] 136 | panic!(format!("No kmer: {:?}", next_kmer)) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 136 | panic!("No kmer: {:?}", next_kmer) [INFO] [stdout] | -- -- [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 16.57s [INFO] running `Command { std: "docker" "inspect" "85992aa27702eb4d4fc130c33b546cefc719e039e4df668145e98ef5ab837e57", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "85992aa27702eb4d4fc130c33b546cefc719e039e4df668145e98ef5ab837e57", kill_on_drop: false }` [INFO] [stdout] 85992aa27702eb4d4fc130c33b546cefc719e039e4df668145e98ef5ab837e57 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bf0992bbefdf13c87189bcc94c3b1b835174c0d55eb59b20380c892d900f847f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "bf0992bbefdf13c87189bcc94c3b1b835174c0d55eb59b20380c892d900f847f", kill_on_drop: false }` [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/compression.rs:136:28 [INFO] [stdout] | [INFO] [stdout] 136 | panic!(format!("No kmer: {:?}", next_kmer)) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 136 | panic!("No kmer: {:?}", next_kmer) [INFO] [stdout] | -- -- [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling rand v0.5.6 [INFO] [stderr] Compiling pretty_assertions v0.5.1 [INFO] [stderr] Compiling debruijn v0.3.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:586:25 [INFO] [stdout] | [INFO] [stdout] 586 | let s1 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v1), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:587:25 [INFO] [stdout] | [INFO] [stdout] 587 | let s2 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v2), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:394:33 [INFO] [stdout] | [INFO] [stdout] 394 | let slices = super::simple_scan::<_, Kmer8>(k, &DnaSlice(&dna), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/compression.rs:136:28 [INFO] [stdout] | [INFO] [stdout] 136 | panic!(format!("No kmer: {:?}", next_kmer)) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 136 | panic!("No kmer: {:?}", next_kmer) [INFO] [stdout] | -- -- [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 10.83s [INFO] running `Command { std: "docker" "inspect" "bf0992bbefdf13c87189bcc94c3b1b835174c0d55eb59b20380c892d900f847f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bf0992bbefdf13c87189bcc94c3b1b835174c0d55eb59b20380c892d900f847f", kill_on_drop: false }` [INFO] [stdout] bf0992bbefdf13c87189bcc94c3b1b835174c0d55eb59b20380c892d900f847f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] a5a37d810ac6658ec534f7d566ccbea7a25cf41f9ea0ad0ae090490c067f2c28 [INFO] running `Command { std: "docker" "start" "-a" "a5a37d810ac6658ec534f7d566ccbea7a25cf41f9ea0ad0ae090490c067f2c28", kill_on_drop: false }` [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/compression.rs:136:28 [INFO] [stderr] | [INFO] [stderr] 136 | panic!(format!("No kmer: {:?}", next_kmer)) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 136 | panic!("No kmer: {:?}", next_kmer) [INFO] [stderr] | -- -- [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stderr] --> src/msp.rs:586:25 [INFO] [stderr] | [INFO] [stderr] 586 | let s1 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v1), &permutation, true); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stderr] --> src/msp.rs:587:25 [INFO] [stderr] | [INFO] [stderr] 587 | let s2 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v2), &permutation, true); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stderr] --> src/msp.rs:394:33 [INFO] [stderr] | [INFO] [stderr] 394 | let slices = super::simple_scan::<_, Kmer8>(k, &DnaSlice(&dna), &permutation, true); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `debruijn` (lib) generated 1 warning [INFO] [stderr] warning: `debruijn` (lib test) generated 4 warnings (1 duplicate) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.06s [INFO] [stdout] [INFO] [stdout] running 48 tests [INFO] [stdout] test dna_string::tests::test_dna_string ... ok [INFO] [stdout] test dna_string::tests::test_from_dna_string ... ok [INFO] [stdout] test dna_string::tests::test_push_bytes ... ok [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/debruijn-673781b5db0d2ad7) [INFO] [stdout] test dna_string::tests::test_reverse ... ok [INFO] [stdout] test dna_string::tests::test_suffix ... ok [INFO] [stdout] test dna_string::tests::test_ndiffs ... ok [INFO] [stdout] test dna_string::tests::test_kmers_too_short ... ok [INFO] [stdout] test dna_string::tests::test_kmers ... ok [INFO] [stdout] test dna_string::tests::test_prefix ... ok [INFO] [stdout] test bitops_avx2::test::test_convert_bytes_for_debug ... ok [INFO] [stdout] test bitops_avx2::test::test_invalid_bases ... ok [INFO] [stdout] test bitops_avx2::test::test_convert_bytes_random ... ok [INFO] [stdout] test kmer::tests::test_kmer_12 ... ok [INFO] [stdout] test kmer::tests::test_kmer_4 ... ok [INFO] [stdout] test kmer::tests::test_kmer_6 ... ok [INFO] [stdout] test kmer::tests::test_kmer_5 ... ok [INFO] [stdout] test kmer::tests::test_kmer_8 ... ok [INFO] [stdout] test kmer::tests::test_kmer_10 ... ok [INFO] [stdout] test kmer::tests::test_kmer_48 ... ok [INFO] [stdout] test msp::tests::test1 ... ok [INFO] [stdout] test kmer::tests::test_kmer_15 ... ok [INFO] [stdout] test msp::tests::test_sample ... ok [INFO] [stdout] test kmer::tests::test_kmer_14 ... ok [INFO] [stdout] test kmer::tests::test_kmer_16 ... ok [INFO] [stdout] test msp::tests::test_slice ... ok [INFO] [stdout] test kmer::tests::test_kmer_31 ... ok [INFO] [stdout] test kmer::tests::test_kmer_20 ... ok [INFO] [stdout] test test::tests::degen_seq_asm ... ok [INFO] [stdout] test test::tests::degen_seq_asm_sharded ... ok [INFO] [stdout] test kmer::tests::test_kmer_24 ... ok [INFO] [stdout] test test::tests::simple_kmer_compress ... ok [INFO] [stdout] test test::tests::simple_sharded ... ok [INFO] [stdout] test test::tests::simple_path_compress ... ok [INFO] [stdout] test test::tests::simple_tip_clean ... ok [INFO] [stdout] test kmer::tests::test_lmer_1_kmer_24 ... ok [INFO] [stdout] test kmer::tests::test_kmer_32 ... ok [INFO] [stdout] test kmer::tests::test_lmer_1_kmer_16 ... ok [INFO] [stdout] test kmer::tests::test_lmer_1_kmer_20 ... ok [INFO] [stdout] test kmer::tests::test_lmer_2_kmer_32 ... ok [INFO] [stdout] test kmer::tests::test_kmer_64 ... ok [INFO] [stdout] test kmer::tests::test_lmer_3_kmer_64 ... ok [INFO] [stdout] test kmer::tests::test_lmer_3_kmer_32 ... ok [INFO] [stdout] test kmer::tests::test_lmer_3_kmer_48 ... ok [INFO] [stdout] test test::tests::complex_kmer_compress ... ok [INFO] [stdout] test test::tests::complex_sharded ... ok [INFO] [stdout] test test::tests::complex_path_compress ... ok [INFO] [stdout] test msp::tests::test_msp_scanner has been running for over 60 seconds [INFO] [stdout] test test::tests::complex_path_compress_k31 has been running for over 60 seconds [INFO] [stdout] test test::tests::complex_path_compress_k31 ... ok [ERROR] error running command: no output for 300 seconds [INFO] running `Command { std: "docker" "inspect" "a5a37d810ac6658ec534f7d566ccbea7a25cf41f9ea0ad0ae090490c067f2c28", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a5a37d810ac6658ec534f7d566ccbea7a25cf41f9ea0ad0ae090490c067f2c28", kill_on_drop: false }` [INFO] [stdout] a5a37d810ac6658ec534f7d566ccbea7a25cf41f9ea0ad0ae090490c067f2c28