[INFO] cloning repository https://github.com/stjude/fqlib
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/stjude/fqlib" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d9b84e1d875d3986bc261f4636a4a7794501c20b
[INFO] testing stjude/fqlib against master#b70888601af92f6cdc0364abab3446e418b91d36 for pr-86479
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib" "/workspace/builds/worker-7/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/stjude/fqlib on toolchain b70888601af92f6cdc0364abab3446e418b91d36
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/stjude/fqlib
[INFO] finished tweaking git repo https://github.com/stjude/fqlib
[INFO] tweaked toml for git repo https://github.com/stjude/fqlib written to /workspace/builds/worker-7/source/Cargo.toml
[INFO] crate git repo https://github.com/stjude/fqlib already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] cb90f049353fd073586fb5c054510757df8e4511decd227bdb790205353c050e
[INFO] running `Command { std: "docker" "start" "-a" "cb90f049353fd073586fb5c054510757df8e4511decd227bdb790205353c050e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "cb90f049353fd073586fb5c054510757df8e4511decd227bdb790205353c050e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cb90f049353fd073586fb5c054510757df8e4511decd227bdb790205353c050e", kill_on_drop: false }`
[INFO] [stdout] cb90f049353fd073586fb5c054510757df8e4511decd227bdb790205353c050e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e777a42526651e16a919613657858d5a4f4e8cd69039e462194e0f58f21739c2
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "e777a42526651e16a919613657858d5a4f4e8cd69039e462194e0f58f21739c2", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.98
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.74
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling serde v1.0.126
[INFO] [stderr]    Compiling ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling itoa v0.4.7
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling pin-project-lite v0.2.7
[INFO] [stderr]    Compiling once_cell v1.8.0
[INFO] [stderr]    Compiling anyhow v1.0.42
[INFO] [stderr]    Compiling smallvec v1.6.1
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling bit-vec v0.5.1
[INFO] [stderr]    Compiling no-std-compat v0.4.1
[INFO] [stderr]    Compiling tracing-core v0.1.18
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling sharded-slab v0.1.1
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling thread_local v1.1.3
[INFO] [stderr]    Compiling proc-macro2 v1.0.28
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling tracing-log v0.1.2
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling time v0.1.43
[INFO] [stderr]    Compiling getrandom v0.2.3
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling bbloom v0.1.0 (https://github.com/zaeleus/bbloom.git?tag=v0.1.0#2c9f6163)
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling matchers v0.0.1
[INFO] [stderr]    Compiling rand_core v0.6.3
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling flate2 v1.0.20
[INFO] [stderr]    Compiling rand v0.8.4
[INFO] [stderr]    Compiling chrono v0.4.19
[INFO] [stderr]    Compiling rand_distr v0.4.1
[INFO] [stderr]    Compiling serde_json v1.0.66
[INFO] [stderr]    Compiling tracing-serde v0.1.2
[INFO] [stderr]    Compiling tracing-attributes v0.1.15
[INFO] [stderr]    Compiling git-testament-derive v0.1.12
[INFO] [stderr]    Compiling git-testament v0.2.0
[INFO] [stderr]    Compiling tracing v0.1.26
[INFO] [stderr]    Compiling tracing-subscriber v0.2.19
[INFO] [stderr]    Compiling fqlib v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 25s
[INFO] running `Command { std: "docker" "inspect" "e777a42526651e16a919613657858d5a4f4e8cd69039e462194e0f58f21739c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e777a42526651e16a919613657858d5a4f4e8cd69039e462194e0f58f21739c2", kill_on_drop: false }`
[INFO] [stdout] e777a42526651e16a919613657858d5a4f4e8cd69039e462194e0f58f21739c2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c904ed9dec638e097465ae251b4efde474e25b017fb7c425f6840b5bb1f36949
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "c904ed9dec638e097465ae251b4efde474e25b017fb7c425f6840b5bb1f36949", kill_on_drop: false }`
[INFO] [stderr]    Compiling fqlib v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 4.61s
[INFO] running `Command { std: "docker" "inspect" "c904ed9dec638e097465ae251b4efde474e25b017fb7c425f6840b5bb1f36949", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c904ed9dec638e097465ae251b4efde474e25b017fb7c425f6840b5bb1f36949", kill_on_drop: false }`
[INFO] [stdout] c904ed9dec638e097465ae251b4efde474e25b017fb7c425f6840b5bb1f36949
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] b823ca9b4c4ebdad8f38b390042cf8fca088fa655ebdb7fb21a5682b387c32e3
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b823ca9b4c4ebdad8f38b390042cf8fca088fa655ebdb7fb21a5682b387c32e3", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.49s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/fqlib-7eb93b876ba964f7)
[INFO] [stdout] 
[INFO] [stdout] running 53 tests
[INFO] [stdout] test commands::filter::tests::test_name_id ... ok
[INFO] [stdout] test commands::lint::tests::test_build_error_message ... ok
[INFO] [stdout] test fastq::record::tests::test_clear ... ok
[INFO] [stdout] test generator::tests::test_next_record ... ok
[INFO] [stdout] test generator::tests::test_next_record_with_read_length ... ok
[INFO] [stdout] test validators::paired::names::tests::test_code ... ok
[INFO] [stdout] test generator::builder::tests::test_build ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_code ... ok
[INFO] [stdout] test fastq::writer::tests::test_write_record ... ok
[INFO] [stdout] test validators::paired::names::tests::test_level ... ok
[INFO] [stdout] test validators::paired::names::tests::test_validate ... ok
[INFO] [stdout] test fastq::reader::tests::test_read_record ... ok
[INFO] [stdout] test fastq::reader::tests::test_read_line ... ok
[INFO] [stdout] test distributions::quality_scores::tests::test_clamp ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_level ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_name ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_new ... ok
[INFO] [stdout] test validators::single::alphabet::tests::test_validate ... ok
[INFO] [stdout] test validators::single::complete::tests::test_code ... ok
[INFO] [stdout] test validators::single::complete::tests::test_name ... ok
[INFO] [stdout] test validators::single::complete::tests::test_level ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_code ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_level ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_validate ... ok
[INFO] [stdout] test validators::paired::names::tests::test_name ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_code ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_level ... ok
[INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_name ... ok
[INFO] [stdout] test validators::single::name::tests::test_name ... ok
[INFO] [stdout] test validators::single::name::tests::test_validate ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_level ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_name ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_validate ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_code ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_level ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_name ... ok
[INFO] [stdout] test validators::single::complete::tests::test_validate ... ok
[INFO] [stdout] test validators::validation_level::tests::test_from_str ... ok
[INFO] [stdout] test validators::tests::test_filter_validators ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_is_empty ... ok
[INFO] [stdout] test validators::single::name::tests::test_code ... ok
[INFO] [stdout] test validators::single::name::tests::test_level ... ok
[INFO] [stdout] test validators::single::quality_string::tests::test_validate ... ok
[INFO] [stdout] test validators::tests::test_filter_paired_read_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_single_read_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_single_read_validators_with_disabled_validators ... ok
[INFO] [stdout] test validators::tests::test_filter_paired_read_validators_with_disabled_validators ... ok
[INFO] [stdout] test validators::single::plus_line::tests::test_code ... ok
[INFO] [stdout] test commands::filter::tests::test_copy_filtered ... ok
[INFO] [stdout] test commands::filter::tests::test_read_names ... ok
[INFO] [stdout] test commands::lint::tests::test_build_error_message_with_no_col_no ... ok
[INFO] [stdout] test distributions::character::tests::test_sample ... ok
[INFO] [stdout] test validators::single::duplicate_name::tests::test_name ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 53 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/fq-9b3c1ade18f38c59)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stderr]    Doc-tests fqlib
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 9 tests
[INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator::is_empty (line 86) ... ok
[INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator::insert (line 63) ... ok
[INFO] [stdout] test src/distributions/character.rs - distributions::character::Character (line 10) ... ok
[INFO] [stdout] test src/fastq/record.rs - fastq::record::Record::reset (line 74) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<SmallRng>::new (line 55) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<R>::next_record (line 123) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<R>::from_rng (line 83) ... ok
[INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator (line 22) ... ok
[INFO] [stdout] test src/generator.rs - generator::Generator<R>::next_record_with_name (line 142) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 9 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 8.42s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "b823ca9b4c4ebdad8f38b390042cf8fca088fa655ebdb7fb21a5682b387c32e3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b823ca9b4c4ebdad8f38b390042cf8fca088fa655ebdb7fb21a5682b387c32e3", kill_on_drop: false }`
[INFO] [stdout] b823ca9b4c4ebdad8f38b390042cf8fca088fa655ebdb7fb21a5682b387c32e3