[INFO] cloning repository https://github.com/joelarmstrong/maf_stream [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/joelarmstrong/maf_stream" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjoelarmstrong%2Fmaf_stream", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjoelarmstrong%2Fmaf_stream'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 1d2e1465d325b161bf62dd38329fa7fbe8b31898 [INFO] testing joelarmstrong/maf_stream against master#b70888601af92f6cdc0364abab3446e418b91d36 for pr-86479 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjoelarmstrong%2Fmaf_stream" "/workspace/builds/worker-6/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/joelarmstrong/maf_stream on toolchain b70888601af92f6cdc0364abab3446e418b91d36 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/joelarmstrong/maf_stream [INFO] finished tweaking git repo https://github.com/joelarmstrong/maf_stream [INFO] tweaked toml for git repo https://github.com/joelarmstrong/maf_stream written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate git repo https://github.com/joelarmstrong/maf_stream already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ec33100612d8c07c89d4330c4c1d55f049972682ceaf828c76362a644814967d [INFO] running `Command { std: "docker" "start" "-a" "ec33100612d8c07c89d4330c4c1d55f049972682ceaf828c76362a644814967d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ec33100612d8c07c89d4330c4c1d55f049972682ceaf828c76362a644814967d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ec33100612d8c07c89d4330c4c1d55f049972682ceaf828c76362a644814967d", kill_on_drop: false }` [INFO] [stdout] ec33100612d8c07c89d4330c4c1d55f049972682ceaf828c76362a644814967d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6a1ed656d41b2b1e1ed3aba6ce6c98e718f63bb9b482e88a6591edf53a6f58cc [INFO] running `Command { std: "docker" "start" "-a" "6a1ed656d41b2b1e1ed3aba6ce6c98e718f63bb9b482e88a6591edf53a6f58cc", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.70 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling remove_dir_all v0.5.2 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multiple_alignment_format v0.1.0 (/opt/rustwide/workdir/multiple_alignment_format) [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v2.33.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling tempfile v3.1.0 [INFO] [stderr] Compiling maf_stream v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 13.54s [INFO] running `Command { std: "docker" "inspect" "6a1ed656d41b2b1e1ed3aba6ce6c98e718f63bb9b482e88a6591edf53a6f58cc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6a1ed656d41b2b1e1ed3aba6ce6c98e718f63bb9b482e88a6591edf53a6f58cc", kill_on_drop: false }` [INFO] [stdout] 6a1ed656d41b2b1e1ed3aba6ce6c98e718f63bb9b482e88a6591edf53a6f58cc [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 045624b975b77ad380dc269c69d85a6424a3e6c67ac31ef4689d64047b9bdf83 [INFO] running `Command { std: "docker" "start" "-a" "045624b975b77ad380dc269c69d85a6424a3e6c67ac31ef4689d64047b9bdf83", kill_on_drop: false }` [INFO] [stderr] Compiling maf_stream v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.62s [INFO] running `Command { std: "docker" "inspect" "045624b975b77ad380dc269c69d85a6424a3e6c67ac31ef4689d64047b9bdf83", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "045624b975b77ad380dc269c69d85a6424a3e6c67ac31ef4689d64047b9bdf83", kill_on_drop: false }` [INFO] [stdout] 045624b975b77ad380dc269c69d85a6424a3e6c67ac31ef4689d64047b9bdf83 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+b70888601af92f6cdc0364abab3446e418b91d36" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] c2f1ff2a971c36e3c5a5f98c8d66a9a40eefe3a6470b87900ee7a4d9cb4a05fd [INFO] running `Command { std: "docker" "start" "-a" "c2f1ff2a971c36e3c5a5f98c8d66a9a40eefe3a6470b87900ee7a4d9cb4a05fd", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/maf_stream-88b77054f9cd1b78) [INFO] [stdout] running 2 tests [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/maf_stream-a0fd0010a5307edd) [INFO] [stdout] test tests::test_range_contains_pos ... ok [INFO] [stdout] test tests::test_overlapping_ranges ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests maf_stream [INFO] [stdout] [INFO] [stdout] running 14 tests [INFO] [stdout] test coverage::tests::test_in_range ... ok [INFO] [stdout] test coverage::tests::test_add_block_no_bed ... ok [INFO] [stdout] test dup_blocks::tests::test_unanimous_base ... ok [INFO] [stdout] test filter::tests::test_get_filtered_columns ... ok [INFO] [stdout] test filter::tests::test_filter_block ... ok [INFO] [stdout] test dup_blocks::tests::test_consensus_base ... ok [INFO] [stdout] test coverage::tests::test_parse_bed ... ok [INFO] [stdout] test lib::tests::test_overlapping_ranges ... ok [INFO] [stdout] test coverage::tests::test_add_block_with_bed ... ok [INFO] [stdout] test dup_blocks::tests::test_get_consensus_info ... ok [INFO] [stdout] test coverage::tests::test_add_block_multi_ref ... ok [INFO] [stdout] test lib::tests::test_range_contains_pos ... ok [INFO] [stdout] test dup_blocks::tests::test_block_contains_dups ... ok [INFO] [stdout] test split::tests::test_simple_split ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 14 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "c2f1ff2a971c36e3c5a5f98c8d66a9a40eefe3a6470b87900ee7a4d9cb4a05fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c2f1ff2a971c36e3c5a5f98c8d66a9a40eefe3a6470b87900ee7a4d9cb4a05fd", kill_on_drop: false }` [INFO] [stdout] c2f1ff2a971c36e3c5a5f98c8d66a9a40eefe3a6470b87900ee7a4d9cb4a05fd