[INFO] fetching crate rust-bio-tools 0.22.0...
[INFO] checking rust-bio-tools-0.22.0 against try#e0f03aec47b100bc29555561bd62a99d1bc6aca5 for pr-86231
[INFO] extracting crate rust-bio-tools 0.22.0 into /workspace/builds/worker-11/source
[INFO] validating manifest of crates.io crate rust-bio-tools 0.22.0 on toolchain e0f03aec47b100bc29555561bd62a99d1bc6aca5
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e0f03aec47b100bc29555561bd62a99d1bc6aca5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] removed /workspace/builds/worker-11/source/.cargo/config
[INFO] started tweaking crates.io crate rust-bio-tools 0.22.0
[INFO] finished tweaking crates.io crate rust-bio-tools 0.22.0
[INFO] tweaked toml for crates.io crate rust-bio-tools 0.22.0 written to /workspace/builds/worker-11/source/Cargo.toml
[INFO] crate crates.io crate rust-bio-tools 0.22.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e0f03aec47b100bc29555561bd62a99d1bc6aca5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded parse-zoneinfo v0.3.0
[INFO] [stderr]   Downloaded globwalk v0.8.1
[INFO] [stderr]   Downloaded ordered-float v0.5.2
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded streaming-stats v0.2.3
[INFO] [stderr]   Downloaded enum-map v0.6.4
[INFO] [stderr]   Downloaded array-macro v1.0.5
[INFO] [stderr]   Downloaded feature-probe v0.1.1
[INFO] [stderr]   Downloaded unic-segment v0.9.0
[INFO] [stderr]   Downloaded bv v0.11.1
[INFO] [stderr]   Downloaded rocksdb v0.16.0
[INFO] [stderr]   Downloaded futures v0.1.30
[INFO] [stderr]   Downloaded deunicode v0.4.3
[INFO] [stderr]   Downloaded chrono-tz v0.5.3
[INFO] [stderr]   Downloaded slug v0.1.4
[INFO] [stderr]   Downloaded multimap v0.8.2
[INFO] [stderr]   Downloaded terminal_size v0.1.15
[INFO] [stderr]   Downloaded humansize v1.1.0
[INFO] [stderr]   Downloaded c_vec v1.0.12
[INFO] [stderr]   Downloaded unic-ucd-segment v0.9.0
[INFO] [stderr]   Downloaded console v0.14.0
[INFO] [stderr]   Downloaded tera v1.6.1
[INFO] [stderr]   Downloaded rand v0.8.1
[INFO] [stderr]   Downloaded bindgen v0.57.0
[INFO] [stderr]   Downloaded bio v0.32.0
[INFO] [stderr]   Downloaded curl-sys v0.4.39+curl-7.74.0
[INFO] [stderr]   Downloaded bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]   Downloaded bio-types v0.10.0
[INFO] [stderr]   Downloaded lz-str v0.1.0
[INFO] [stderr]   Downloaded jsonm v0.1.4
[INFO] [stderr]   Downloaded GSL v1.1.0
[INFO] [stderr]   Downloaded fern v0.5.9
[INFO] [stderr]   Downloaded enum-map-derive v0.4.6
[INFO] [stderr]   Downloaded triple_accel v0.3.4
[INFO] [stderr]   Downloaded hyper v0.12.35
[INFO] [stderr]   Downloaded rust-htslib v0.36.0
[INFO] [stderr]   Downloaded xlsxwriter v0.3.3
[INFO] [stderr]   Downloaded libxlsxwriter-sys v1.0.2
[INFO] [stderr]   Downloaded libz-sys v1.1.2
[INFO] [stderr]   Downloaded getset v0.0.9
[INFO] [stderr]   Downloaded openssl-src v111.13.0+1.1.1i
[INFO] [stderr]   Downloaded librocksdb-sys v6.17.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+e0f03aec47b100bc29555561bd62a99d1bc6aca5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6e3da0f43bc0b24181a5253a002e716761a064e3c964950164fca36449783678
[INFO] running `Command { std: "docker" "start" "-a" "6e3da0f43bc0b24181a5253a002e716761a064e3c964950164fca36449783678", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6e3da0f43bc0b24181a5253a002e716761a064e3c964950164fca36449783678", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6e3da0f43bc0b24181a5253a002e716761a064e3c964950164fca36449783678", kill_on_drop: false }`
[INFO] [stdout] 6e3da0f43bc0b24181a5253a002e716761a064e3c964950164fca36449783678
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+e0f03aec47b100bc29555561bd62a99d1bc6aca5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 18bca85f69ef18a338e7c2b9a163f2365fec60d80c82bd752f71593b072c11b1
[INFO] running `Command { std: "docker" "start" "-a" "18bca85f69ef18a338e7c2b9a163f2365fec60d80c82bd752f71593b072c11b1", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.82
[INFO] [stderr]    Compiling syn v1.0.58
[INFO] [stderr]    Compiling version_check v0.9.2
[INFO] [stderr]    Compiling serde_derive v1.0.118
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]    Compiling pkg-config v0.3.19
[INFO] [stderr]    Compiling serde v1.0.118
[INFO] [stderr]     Checking byteorder v1.4.2
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]     Checking futures v0.1.30
[INFO] [stderr]    Compiling regex-syntax v0.6.22
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]    Compiling maybe-uninit v2.0.0
[INFO] [stderr]     Checking itoa v0.4.7
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]     Checking tinyvec_macros v0.1.0
[INFO] [stderr]    Compiling autocfg v0.1.7
[INFO] [stderr]     Checking rand_core v0.4.2
[INFO] [stderr]     Checking hashbrown v0.9.1
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]     Checking slab v0.4.2
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling unicode-segmentation v1.7.1
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling const_fn v0.4.5
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling yaml-rust v0.3.5
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling serde_json v1.0.61
[INFO] [stderr]    Compiling bindgen v0.57.0
[INFO] [stderr]    Compiling getrandom v0.2.1
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling bindgen v0.58.1
[INFO] [stderr]    Compiling openssl v0.10.32
[INFO] [stderr]     Checking gimli v0.23.0
[INFO] [stderr]    Compiling httparse v1.3.4
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling ucd-trie v0.1.3
[INFO] [stderr]     Checking foreign-types-shared v0.1.1
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]     Checking percent-encoding v1.0.1
[INFO] [stderr]    Compiling shlex v1.0.0
[INFO] [stderr]     Checking adler v0.2.3
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]     Checking object v0.22.0
[INFO] [stderr]    Compiling maplit v1.0.2
[INFO] [stderr]    Compiling native-tls v0.2.7
[INFO] [stderr]     Checking try-lock v0.2.3
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling rayon-core v1.9.0
[INFO] [stderr]     Checking rustc-demangle v0.1.18
[INFO] [stderr]     Checking unic-char-range v0.9.0
[INFO] [stderr]     Checking unic-common v0.9.0
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling encoding_rs v0.8.26
[INFO] [stderr]     Checking smallvec v1.6.1
[INFO] [stderr]     Checking openssl-probe v0.1.2
[INFO] [stderr]     Checking adler32 v1.2.0
[INFO] [stderr]     Checking dtoa v0.4.7
[INFO] [stderr]     Checking deunicode v0.4.3
[INFO] [stderr]    Compiling anyhow v1.0.38
[INFO] [stderr]     Checking mime v0.3.16
[INFO] [stderr]     Checking array-macro v1.0.5
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking void v1.0.2
[INFO] [stderr]     Checking fixedbitset v0.2.0
[INFO] [stderr]    Compiling bio v0.32.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking strum v0.18.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking c_vec v1.0.12
[INFO] [stderr]     Checking triple_accel v0.3.4
[INFO] [stderr]     Checking remove_dir_all v0.5.3
[INFO] [stderr]     Checking humansize v1.1.0
[INFO] [stderr]     Checking bytecount v0.6.2
[INFO] [stderr]     Checking lz-str v0.1.0
[INFO] [stderr]     Checking rustc-serialize v0.3.24
[INFO] [stderr]    Compiling crossbeam-utils v0.7.2
[INFO] [stderr]     Checking thread_local v1.1.0
[INFO] [stderr]    Compiling indexmap v1.6.1
[INFO] [stderr]    Compiling crossbeam-utils v0.8.1
[INFO] [stderr]    Compiling memoffset v0.5.6
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling crossbeam-epoch v0.8.2
[INFO] [stderr]    Compiling memoffset v0.6.1
[INFO] [stderr]    Compiling miniz_oxide v0.4.3
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]     Checking instant v0.1.9
[INFO] [stderr]    Compiling rayon v1.5.0
[INFO] [stderr]     Checking try_from v0.3.2
[INFO] [stderr]    Compiling libloading v0.7.0
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]     Checking tinyvec v1.1.0
[INFO] [stderr]     Checking lock_api v0.3.4
[INFO] [stderr]     Checking lock_api v0.4.2
[INFO] [stderr]     Checking itertools v0.9.0
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]     Checking form_urlencoded v1.0.0
[INFO] [stderr]     Checking regex-automata v0.1.9
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking base64 v0.10.1
[INFO] [stderr]     Checking rand_core v0.3.1
[INFO] [stderr]     Checking rand_jitter v0.1.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling heck v0.3.2
[INFO] [stderr]     Checking foreign-types v0.3.2
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling pest v2.1.3
[INFO] [stderr]     Checking walkdir v2.3.1
[INFO] [stderr]     Checking unic-ucd-version v0.9.0
[INFO] [stderr]     Checking unic-char-property v0.9.0
[INFO] [stderr]     Checking matrixmultiply v0.2.4
[INFO] [stderr]    Compiling rand_pcg v0.1.2
[INFO] [stderr]    Compiling rand_chacha v0.1.1
[INFO] [stderr]    Compiling rand v0.6.5
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]    Compiling unicase v2.6.0
[INFO] [stderr]    Compiling error-chain v0.12.4
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking tokio-sync v0.1.8
[INFO] [stderr]     Checking miniz_oxide v0.3.7
[INFO] [stderr]    Compiling clang-sys v1.2.0
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]     Checking slug v0.1.4
[INFO] [stderr]     Checking unreachable v1.0.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]    Compiling GSL v1.1.0
[INFO] [stderr]     Checking rand_xorshift v0.1.1
[INFO] [stderr]     Checking rand_hc v0.1.0
[INFO] [stderr]     Checking rand_isaac v0.1.1
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]    Compiling quote v1.0.8
[INFO] [stderr]     Checking unic-ucd-segment v0.9.0
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]    Compiling aho-corasick v0.7.15
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking regex v1.4.3
[INFO] [stderr]     Checking smallvec v0.6.14
[INFO] [stderr]     Checking ordered-float v1.1.1
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking approx v0.3.2
[INFO] [stderr]     Checking number_prefix v0.2.8
[INFO] [stderr]     Checking streaming-stats v0.2.3
[INFO] [stderr]     Checking approx v0.4.0
[INFO] [stderr]     Checking want v0.2.0
[INFO] [stderr]     Checking ordered-float v0.5.2
[INFO] [stderr]     Checking unicode-normalization v0.1.16
[INFO] [stderr]     Checking unic-segment v0.9.0
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling parking_lot_core v0.6.2
[INFO] [stderr]    Compiling parking_lot v0.9.0
[INFO] [stderr]    Compiling hyper v0.12.35
[INFO] [stderr]     Checking crossbeam-channel v0.5.0
[INFO] [stderr]     Checking petgraph v0.5.1
[INFO] [stderr]    Compiling mime_guess v2.0.3
[INFO] [stderr]     Checking tokio-executor v0.1.10
[INFO] [stderr]     Checking crossbeam-queue v0.2.3
[INFO] [stderr]     Checking crossbeam-deque v0.7.3
[INFO] [stderr] error: could not compile `regex-syntax`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name regex_syntax /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/regex-syntax-0.6.22/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' -C metadata=0e1637be2d60a974 -C extra-filename=-0e1637be2d60a974 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "18bca85f69ef18a338e7c2b9a163f2365fec60d80c82bd752f71593b072c11b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "18bca85f69ef18a338e7c2b9a163f2365fec60d80c82bd752f71593b072c11b1", kill_on_drop: false }`
[INFO] [stdout] 18bca85f69ef18a338e7c2b9a163f2365fec60d80c82bd752f71593b072c11b1