[INFO] cloning repository https://github.com/jacg/petalo [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/jacg/petalo" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjacg%2Fpetalo", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjacg%2Fpetalo'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 5500f0b6f739ea8669ef568ee3e23ed3be81ba2e [INFO] checking jacg/petalo against master#0a8629bff642c3c3b84bb644c0099194f063b627 for pr-86231 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjacg%2Fpetalo" "/workspace/builds/worker-9/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-9/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/jacg/petalo on toolchain 0a8629bff642c3c3b84bb644c0099194f063b627 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0a8629bff642c3c3b84bb644c0099194f063b627" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/jacg/petalo [INFO] finished tweaking git repo https://github.com/jacg/petalo [INFO] tweaked toml for git repo https://github.com/jacg/petalo written to /workspace/builds/worker-9/source/Cargo.toml [INFO] crate git repo https://github.com/jacg/petalo already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0a8629bff642c3c3b84bb644c0099194f063b627" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+0a8629bff642c3c3b84bb644c0099194f063b627" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7e7bc32d20e1097325124db9fb894ba2d5f3d578e4cddd5a2ddb854e993a6fa2 [INFO] running `Command { std: "docker" "start" "-a" "7e7bc32d20e1097325124db9fb894ba2d5f3d578e4cddd5a2ddb854e993a6fa2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7e7bc32d20e1097325124db9fb894ba2d5f3d578e4cddd5a2ddb854e993a6fa2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7e7bc32d20e1097325124db9fb894ba2d5f3d578e4cddd5a2ddb854e993a6fa2", kill_on_drop: false }` [INFO] [stdout] 7e7bc32d20e1097325124db9fb894ba2d5f3d578e4cddd5a2ddb854e993a6fa2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+0a8629bff642c3c3b84bb644c0099194f063b627" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ef0bf462a524d089f86f44427dcb875e8f3559e76c48f0d18390e449582f4c3f [INFO] running `Command { std: "docker" "start" "-a" "ef0bf462a524d089f86f44427dcb875e8f3559e76c48f0d18390e449582f4c3f", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libc v0.2.95 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Compiling xml-rs v0.8.3 [INFO] [stderr] Checking smallvec v1.6.1 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking once_cell v1.7.2 [INFO] [stderr] Checking scoped-tls v1.0.0 [INFO] [stderr] Compiling typenum v1.13.0 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking ttf-parser v0.6.2 [INFO] [stderr] Compiling nix v0.18.0 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Checking slab v0.4.3 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Checking ab_glyph_rasterizer v0.1.4 [INFO] [stderr] Compiling bindgen v0.57.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Checking xdg v2.2.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Checking hashbrown v0.9.1 [INFO] [stderr] Checking weezl v0.1.5 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Compiling winit v0.23.0 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling serde_derive v1.0.126 [INFO] [stderr] Checking regex-syntax v0.6.25 [INFO] [stderr] Compiling unicode-segmentation v1.7.1 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Compiling serde v1.0.126 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking color_quant v1.1.0 [INFO] [stderr] Checking slotmap v0.4.0 [INFO] [stderr] Checking bytemuck v1.5.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Compiling hdf5 v0.7.1 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Checking glow v0.6.1 [INFO] [stderr] Checking number_prefix v0.4.0 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking quick-error v2.0.1 [INFO] [stderr] Compiling proc-macro-hack v0.5.19 [INFO] [stderr] Checking assert_approx_eq v1.1.0 [INFO] [stderr] Compiling unindent v0.1.7 [INFO] [stderr] Compiling inventory v0.1.10 [INFO] [stderr] Compiling pyo3 v0.13.2 [INFO] [stderr] Checking mlem v0.1.0 (/opt/rustwide/workdir/mlem) [INFO] [stderr] Checking lock_api v0.4.4 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling libloading v0.6.7 [INFO] [stderr] Checking walkdir v2.3.2 [INFO] [stderr] Checking miniz_oxide v0.3.7 [INFO] [stderr] Checking instant v0.1.9 [INFO] [stderr] Checking itertools v0.10.1 [INFO] [stderr] Checking deflate v0.8.6 [INFO] [stderr] Checking stb_truetype v0.3.1 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking gif v0.11.2 [INFO] [stderr] Checking pretty_assertions v0.6.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking crossbeam-utils v0.8.5 [INFO] [stderr] Compiling heck v0.3.2 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling nom v6.1.2 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling generic-array v0.14.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking crc32fast v1.2.1 [INFO] [stderr] Checking owned_ttf_parser v0.6.0 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling indexmap v1.6.2 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Checking dlib v0.4.2 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Checking dlib v0.5.0 [INFO] [stderr] Checking rusttype v0.9.2 [INFO] [stderr] Compiling rstest v0.6.4 [INFO] [stderr] Compiling wayland-sys v0.28.5 [INFO] [stderr] Compiling x11-dl v2.18.5 [INFO] [stderr] Compiling hdf5-sys v0.7.1 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Checking andrew v0.3.1 [INFO] [stderr] Checking png v0.16.8 [INFO] [stderr] Compiling gl_generator v0.14.0 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Compiling wayland-scanner v0.28.5 [INFO] [stderr] Checking regex v1.5.4 [INFO] [stderr] Compiling glutin_glx_sys v0.1.7 [INFO] [stderr] Compiling glutin_egl_sys v0.1.5 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Checking nix v0.20.0 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking getrandom v0.1.16 [INFO] [stderr] Checking parking_lot_core v0.8.3 [INFO] [stderr] Checking iovec v0.1.4 [INFO] [stderr] Checking net2 v0.2.37 [INFO] [stderr] Checking memmap2 v0.1.0 [INFO] [stderr] Checking shared_library v0.1.9 [INFO] [stderr] Checking raw-window-handle v0.3.3 [INFO] [stderr] Checking terminal_size v0.1.17 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking hdf5-types v0.7.1 [INFO] [stderr] Checking getrandom v0.2.3 [INFO] [stderr] Checking wait-timeout v0.2.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-6154271a55543555/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5646d6fd5610 - std::backtrace_rs::backtrace::libunwind::trace::hfa838fc631229987 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x5646d6fd5610 - std::backtrace_rs::backtrace::trace_unsynchronized::h93a23e36ec026219 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5646d6fd5610 - std::sys_common::backtrace::_print_fmt::hba56c7f796a4152f [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5646d6fd5610 - ::fmt::h214637f1e26310e1 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x5646d6ff3b9c - core::fmt::write::h7aa6cd0067dca82a [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/core/src/fmt/mod.rs:1110:17 [INFO] [stderr] 5: 0x5646d6fd2b75 - std::io::Write::write_fmt::heb07fc0616bbd06d [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/io/mod.rs:1588:15 [INFO] [stderr] 6: 0x5646d6fd767b - std::sys_common::backtrace::_print::h2c2441c37e894fb5 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5646d6fd767b - std::sys_common::backtrace::print::h4fb679ac439362ea [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5646d6fd767b - std::panicking::default_hook::{{closure}}::h56bbadec2356e5d2 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x5646d6fd7151 - std::panicking::default_hook::hb25822b45f6fdc4e [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x5646d6fd7d44 - std::panicking::rust_panic_with_hook::h4da5578e7277d2d4 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x5646d6f12873 - std::panicking::begin_panic::{{closure}}::haca61fef348ab7f1 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x5646d6f1e039 - std::sys_common::backtrace::__rust_end_short_backtrace::hdb645fa066be44b5 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x5646d6f127a9 - std::panicking::begin_panic::h31023e0028d0741c [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x5646d6dc9eb7 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h65acfe598e1facee [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] 15: 0x5646d6dcb6eb - build_script_build::main::h37ed9eafab6b2149 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:647:9 [INFO] [stderr] 16: 0x5646d6dd02ab - core::ops::function::FnOnce::call_once::h0567a9dd2c4153b6 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x5646d6dd798e - std::sys_common::backtrace::__rust_begin_short_backtrace::h93c104200ad69788 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x5646d6dd5fe1 - std::rt::lang_start::{{closure}}::h353c744f6029a519 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/rt.rs:49:18 [INFO] [stderr] 19: 0x5646d6fd8249 - core::ops::function::impls:: for &F>::call_once::hd933294140eb11aa [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x5646d6fd8249 - std::panicking::try::do_call::h8342fe3d9218b807 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x5646d6fd8249 - std::panicking::try::hcbd73d6d0d58a8f0 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x5646d6fd8249 - std::panic::catch_unwind::hde9cf73f810acfcc [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x5646d6fd8249 - std::rt::lang_start_internal::heb39e7ea6e5d6f6f [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/rt.rs:34:21 [INFO] [stderr] 24: 0x5646d6dd5fc0 - std::rt::lang_start::h42a76c739d8780b6 [INFO] [stderr] at /rustc/0a8629bff642c3c3b84bb644c0099194f063b627/library/std/src/rt.rs:48:5 [INFO] [stderr] 25: 0x5646d6dccbdc - main [INFO] [stderr] 26: 0x7f670fdd00b3 - __libc_start_main [INFO] [stderr] 27: 0x5646d6dc4f0e - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "ef0bf462a524d089f86f44427dcb875e8f3559e76c48f0d18390e449582f4c3f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ef0bf462a524d089f86f44427dcb875e8f3559e76c48f0d18390e449582f4c3f", kill_on_drop: false }` [INFO] [stdout] ef0bf462a524d089f86f44427dcb875e8f3559e76c48f0d18390e449582f4c3f