[INFO] fetching crate d4utils 0.2.17... [INFO] checking d4utils-0.2.17 against try#8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346 for pr-86194 [INFO] extracting crate d4utils 0.2.17 into /workspace/builds/worker-8/source [INFO] validating manifest of crates.io crate d4utils 0.2.17 on toolchain 8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4utils 0.2.17 [INFO] finished tweaking crates.io crate d4utils 0.2.17 [INFO] tweaked toml for crates.io crate d4utils 0.2.17 written to /workspace/builds/worker-8/source/Cargo.toml [INFO] crate crates.io crate d4utils 0.2.17 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded d4-framefile v0.2.17 [INFO] [stderr] Downloaded d4 v0.2.17 [INFO] [stderr] Downloaded d4-hts v0.2.17 [INFO] [stderr] Downloaded d4-bigwig v0.2.17 [INFO] [stderr] Downloaded cpuprofiler v0.0.4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ec5bb3788f38819db771cc60bf58ebcc1e8fa5fd1a7328727d55dcf380d966b9 [INFO] running `Command { std: "docker" "start" "-a" "ec5bb3788f38819db771cc60bf58ebcc1e8fa5fd1a7328727d55dcf380d966b9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ec5bb3788f38819db771cc60bf58ebcc1e8fa5fd1a7328727d55dcf380d966b9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ec5bb3788f38819db771cc60bf58ebcc1e8fa5fd1a7328727d55dcf380d966b9", kill_on_drop: false }` [INFO] [stdout] ec5bb3788f38819db771cc60bf58ebcc1e8fa5fd1a7328727d55dcf380d966b9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5e4e6975a5e139755b90b7e2f1bfb611c70f6f10cc5bc9ca9d7ff30ef69f2cb0 [INFO] running `Command { std: "docker" "start" "-a" "5e4e6975a5e139755b90b7e2f1bfb611c70f6f10cc5bc9ca9d7ff30ef69f2cb0", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.94 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.4 [INFO] [stderr] Compiling memoffset v0.6.3 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Checking crossbeam-epoch v0.9.4 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Checking getrandom v0.1.16 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking regex v1.5.4 [INFO] [stderr] Checking serde_json v1.0.64 [INFO] [stderr] Checking d4-framefile v0.2.17 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Compiling d4-hts v0.2.17 [INFO] [stderr] Compiling d4-bigwig v0.2.17 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.17` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-2c5628120f11e38a/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-b483787bffca4bcd/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-b483787bffca4bcd/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.17/build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55b55402b070 - std::backtrace_rs::backtrace::libunwind::trace::hfa838fc631229987 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55b55402b070 - std::backtrace_rs::backtrace::trace_unsynchronized::h93a23e36ec026219 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55b55402b070 - std::sys_common::backtrace::_print_fmt::hba56c7f796a4152f [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55b55402b070 - ::fmt::h214637f1e26310e1 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55b55404fefc - core::fmt::write::h7aa6cd0067dca82a [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/core/src/fmt/mod.rs:1110:17 [INFO] [stderr] 5: 0x55b554027f55 - std::io::Write::write_fmt::heb07fc0616bbd06d [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/io/mod.rs:1588:15 [INFO] [stderr] 6: 0x55b55402d52b - std::sys_common::backtrace::_print::h2c2441c37e894fb5 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55b55402d52b - std::sys_common::backtrace::print::h4fb679ac439362ea [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55b55402d52b - std::panicking::default_hook::{{closure}}::h56bbadec2356e5d2 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55b55402d001 - std::panicking::default_hook::hb25822b45f6fdc4e [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55b55402dbf4 - std::panicking::rust_panic_with_hook::h4da5578e7277d2d4 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55b55402d6a7 - std::panicking::begin_panic_handler::{{closure}}::h003783ddb3cba4e8 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x55b55402b54c - std::sys_common::backtrace::__rust_end_short_backtrace::hd138d2032731ed21 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55b55402d639 - rust_begin_unwind [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x55b553acc931 - core::panicking::panic_fmt::hbe99dddd3092ba3c [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55b553acc87d - core::panicking::panic::h3de4db67bd397eb3 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55b553ad035d - build_script_build::build_own_htslib::h855c2e6a298b1c67 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.17/build.rs:33:5 [INFO] [stderr] 17: 0x55b553ad07be - build_script_build::main::hfaa54924f67f24d7 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.17/build.rs:65:9 [INFO] [stderr] 18: 0x55b553acef1b - core::ops::function::FnOnce::call_once::h4a903445f98b5a64 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55b553ad1f5e - std::sys_common::backtrace::__rust_begin_short_backtrace::h9b25b2310c8ad392 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55b553acedf1 - std::rt::lang_start::{{closure}}::h6d441cb74982dfaf [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/rt.rs:49:18 [INFO] [stderr] 21: 0x55b55402e1f9 - core::ops::function::impls:: for &F>::call_once::hd933294140eb11aa [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55b55402e1f9 - std::panicking::try::do_call::h8342fe3d9218b807 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x55b55402e1f9 - std::panicking::try::hcbd73d6d0d58a8f0 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x55b55402e1f9 - std::panic::catch_unwind::hde9cf73f810acfcc [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/panic.rs:434:14 [INFO] [stderr] 25: 0x55b55402e1f9 - std::rt::lang_start_internal::heb39e7ea6e5d6f6f [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/rt.rs:34:21 [INFO] [stderr] 26: 0x55b553acedd0 - std::rt::lang_start::he8b5dd6122ea4119 [INFO] [stderr] at /rustc/8552849d5ae3b6c66b89a0ac2e9c1e3ef5cde346/library/std/src/rt.rs:48:5 [INFO] [stderr] 27: 0x55b553ad0e0c - main [INFO] [stderr] 28: 0x7faae05140b3 - __libc_start_main [INFO] [stderr] 29: 0x55b553acd12e - _start [INFO] [stderr] 30: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "5e4e6975a5e139755b90b7e2f1bfb611c70f6f10cc5bc9ca9d7ff30ef69f2cb0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5e4e6975a5e139755b90b7e2f1bfb611c70f6f10cc5bc9ca9d7ff30ef69f2cb0", kill_on_drop: false }` [INFO] [stdout] 5e4e6975a5e139755b90b7e2f1bfb611c70f6f10cc5bc9ca9d7ff30ef69f2cb0