[INFO] fetching crate rust-htslib 0.36.0... [INFO] testing rust-htslib-0.36.0 against try#ce59db7a1b1b012fb2793c4641c1bdecad7a128b for pr-85530 [INFO] extracting crate rust-htslib 0.36.0 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate rust-htslib 0.36.0 on toolchain ce59db7a1b1b012fb2793c4641c1bdecad7a128b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-5/source/.cargo/config [INFO] started tweaking crates.io crate rust-htslib 0.36.0 [INFO] finished tweaking crates.io crate rust-htslib 0.36.0 [INFO] tweaked toml for crates.io crate rust-htslib 0.36.0 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded serde_bytes v0.11.5 [INFO] [stderr] Downloaded strum_macros v0.20.1 [INFO] [stderr] Downloaded bio-types v0.11.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded libdeflate-sys v0.5.0 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded pretty_assertions v0.6.1 [INFO] [stderr] Downloaded output_vt100 v0.1.2 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded hts-sys v1.11.1-fix1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f3bcb931e39f5fa40d027e1e3d0747db576cb5e07655468a899f9f608dbd7815 [INFO] running `Command { std: "docker" "start" "-a" "f3bcb931e39f5fa40d027e1e3d0747db576cb5e07655468a899f9f608dbd7815", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f3bcb931e39f5fa40d027e1e3d0747db576cb5e07655468a899f9f608dbd7815", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f3bcb931e39f5fa40d027e1e3d0747db576cb5e07655468a899f9f608dbd7815", kill_on_drop: false }` [INFO] [stdout] f3bcb931e39f5fa40d027e1e3d0747db576cb5e07655468a899f9f608dbd7815 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f708c9fae23889c10d5cf91609e6ec0172da6c38009bbe7e2e3fd05c4c5ea004 [INFO] running `Command { std: "docker" "start" "-a" "f708c9fae23889c10d5cf91609e6ec0172da6c38009bbe7e2e3fd05c4c5ea004", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling unicode-segmentation v1.7.1 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling jobserver v0.1.22 [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Compiling cc v1.0.68 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling openssl-src v111.15.0+1.1.1k [INFO] [stderr] Compiling openssl-sys v0.9.63 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling curl-sys v0.4.44+curl-7.77.0 [INFO] [stderr] Compiling bzip2-sys v0.1.10+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.25 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling thiserror v1.0.25 [INFO] [stderr] Compiling bio-types v0.11.0 [INFO] [stderr] Compiling rust-htslib v0.36.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/utils.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | format!("dst len {} < src len {}", dst.len(), src.len()) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panic)]` on by default [INFO] [stdout] = note: this is no longer accepted in Rust 2021 [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 22 | "dst len {} < src len {}", dst.len(), src.len() [INFO] [stdout] | -- -- [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 53.12s [INFO] running `Command { std: "docker" "inspect" "f708c9fae23889c10d5cf91609e6ec0172da6c38009bbe7e2e3fd05c4c5ea004", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f708c9fae23889c10d5cf91609e6ec0172da6c38009bbe7e2e3fd05c4c5ea004", kill_on_drop: false }` [INFO] [stdout] f708c9fae23889c10d5cf91609e6ec0172da6c38009bbe7e2e3fd05c4c5ea004 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 76ac9c69817cb6ecaf036a8a4c6ebf38d21efb27f5c8d121c18a6693ddca91d2 [INFO] running `Command { std: "docker" "start" "-a" "76ac9c69817cb6ecaf036a8a4c6ebf38d21efb27f5c8d121c18a6693ddca91d2", kill_on_drop: false }` [INFO] [stderr] Compiling itoa v0.4.7 [INFO] [stderr] Compiling difference v2.0.0 [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/utils.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | format!("dst len {} < src len {}", dst.len(), src.len()) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panic)]` on by default [INFO] [stdout] = note: this is no longer accepted in Rust 2021 [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 22 | "dst len {} < src len {}", dst.len(), src.len() [INFO] [stdout] | -- -- [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Compiling rand_core v0.6.2 [INFO] [stderr] Compiling pretty_assertions v0.6.1 [INFO] [stderr] Compiling rand_chacha v0.3.0 [INFO] [stderr] Compiling rand v0.8.3 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Compiling rust-htslib v0.36.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/utils.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | format!("dst len {} < src len {}", dst.len(), src.len()) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panic)]` on by default [INFO] [stdout] = note: this is no longer accepted in Rust 2021 [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 22 | "dst len {} < src len {}", dst.len(), src.len() [INFO] [stdout] | -- -- [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 11.23s [INFO] running `Command { std: "docker" "inspect" "76ac9c69817cb6ecaf036a8a4c6ebf38d21efb27f5c8d121c18a6693ddca91d2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "76ac9c69817cb6ecaf036a8a4c6ebf38d21efb27f5c8d121c18a6693ddca91d2", kill_on_drop: false }` [INFO] [stdout] 76ac9c69817cb6ecaf036a8a4c6ebf38d21efb27f5c8d121c18a6693ddca91d2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 1b4849800a6727db03929fdbaae0691eaf789c7046ab5b29337d292299a00a28 [INFO] running `Command { std: "docker" "start" "-a" "1b4849800a6727db03929fdbaae0691eaf789c7046ab5b29337d292299a00a28", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/utils.rs:22:9 [INFO] [stderr] | [INFO] [stderr] 22 | format!("dst len {} < src len {}", dst.len(), src.len()) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panic)]` on by default [INFO] [stderr] = note: this is no longer accepted in Rust 2021 [INFO] [stderr] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 22 | "dst len {} < src len {}", dst.len(), src.len() [INFO] [stderr] | -- -- [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/utils.rs:22:9 [INFO] [stderr] | [INFO] [stderr] 22 | format!("dst len {} < src len {}", dst.len(), src.len()) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panic)]` on by default [INFO] [stderr] = note: this is no longer accepted in Rust 2021 [INFO] [stderr] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 22 | "dst len {} < src len {}", dst.len(), src.len() [INFO] [stderr] | -- -- [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.37s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rust_htslib-55ca388c5655f34b) [INFO] [stdout] [INFO] [stdout] running 101 tests [INFO] [stdout] test bam::ext::tests::spliced_reads ... ok [INFO] [stdout] test bam::record::alignment_cigar_tests::test_cigar ... ok [INFO] [stdout] test bam::pileup::tests::test_max_pileup ... ok [INFO] [stdout] test bam::buffer::tests::test_buffer ... ok [INFO] [stdout] test bam::record::tests::test_cigar_read_pos ... ok [INFO] [stdout] test bam::record::tests::test_clone ... ok [INFO] [stdout] test bam::record::tests::test_flags ... ok [INFO] [stdout] test bam::tests::test_bam_fails_on_toml ... ok [INFO] [stdout] test bam::tests::test_bam_fails_on_vcf ... ok [INFO] [stdout] test bam::tests::test_compression_level_conversion ... ok [INFO] [stdout] test bam::ext::tests::test_aligned_block_pairs ... ok [INFO] [stdout] test bam::tests::test_cigar_modes ... ok [INFO] [stdout] test bam::tests::parse_from_sam ... ok [INFO] [stdout] test bam::record::alignment_cigar_tests::test_read_orientation_f1r2 ... ok [INFO] [stdout] test bam::record::tests::test_cigar_string ... ok [INFO] [stdout] test bam::tests::test_indexde_bam_fails_on_vcf ... ok [INFO] [stdout] test bam::ext::tests::test_introns ... ok [INFO] [stderr] [E::hts_open_format] Failed to open file "./test/bam2sam_out.sam" : Read-only file system [INFO] [stdout] test bam::tests::test_pileup ... ok [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 2 after 0 of 4 bytes [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 3 after 0 of 4 bytes [INFO] [stdout] test bam::tests::test_set_record ... ok [INFO] [stdout] test bam::tests::test_read_sam_header ... ok [INFO] [stdout] test bam::tests::test_remove_aux ... ok [INFO] [stdout] test bam::tests::test_seek ... ok [INFO] [stdout] test bam::ext::tests::test_get_cigar_stats ... ok [INFO] [stdout] test bam::tests::test_read ... ok [INFO] [stdout] test bam::tests::test_set_repeated ... ok [INFO] [stdout] test bam::tests::test_read_indexed ... ok [INFO] [stdout] test bam::tests::test_read_against_sam ... ok [INFO] [stderr] [W::vcf_parse] Contig '19' is not defined in the header. (Quick workaround: index the file with tabix.) [INFO] [stdout] test bam::tests::test_set_qname ... ok [INFO] [stdout] test bam::tests::test_set_qname2 ... ok [INFO] [stdout] test bam::tests::test_rc_records ... ok [INFO] [stdout] test bam::ext::tests::test_aligned_pairs ... ok [INFO] [stdout] test bcf::record::tests::test_missing_float ... ok [INFO] [stdout] test bcf::record::tests::test_vector_end_float ... ok [INFO] [stdout] test bcf::tests::test_fails_on_non_existiant ... ok [INFO] [stdout] test bam::ext::tests::test_reference_start_end ... ok [INFO] [stdout] test bcf::tests::test_header_ids ... ok [INFO] [stdout] test bcf::tests::test_header_samples ... ok [INFO] [stdout] test bcf::tests::test_header_records ... ok [INFO] [stdout] test bam::tests::test_copy_template ... ok [INFO] [stdout] test bcf::tests::test_missing ... ok [INFO] [stdout] test bcf::tests::test_fails_on_bam ... ok [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 2 after 0 of 4 bytes [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 3 after 0 of 4 bytes [INFO] [stdout] test bcf::tests::test_genotype_allele_conversion ... ok [INFO] [stdout] test bcf::tests::test_alt_allele_dosage ... ok [INFO] [stdout] test bcf::tests::test_genotype_missing_allele_conversion ... ok [INFO] [stdout] test bam::tests::test_read_cram ... ok [INFO] [stdout] test bcf::tests::test_genotypes ... ok [INFO] [stdout] test bam::ext::tests::test_reference_positions_full ... ok [INFO] [stdout] test bcf::tests::test_obs_cornercase ... ok [INFO] [stdout] test bcf::tests::test_strings ... ok [INFO] [stdout] test bam::tests::test_read_indexed_different_index_name ... ok [INFO] [stdout] test bcf::tests::test_header_contigs ... ok [INFO] [stdout] test bcf::buffer::tests::test_buffer ... ok [INFO] [stdout] test bcf::tests::test_svlen ... ok [INFO] [stdout] test bcf::tests::test_read ... ok [INFO] [stdout] test bgzf::tests::test_is_bgzip_plain ... ok [INFO] [stdout] test bam::ext::tests::test_reference_positions ... ok [INFO] [stdout] test bcf::tests::test_write_various ... ok [INFO] [stdout] test bgzf::tests::test_open_gzip ... ok [INFO] [stdout] test bgzf::tests::test_open_bgzip ... ok [INFO] [stdout] test bgzf::tests::test_open_plain ... ok [INFO] [stdout] test faidx::tests::faidx_open ... ok [INFO] [stdout] test faidx::tests::faidx_position_too_large ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_end ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_between ... ok [INFO] [stdout] test bcf::tests::test_remove_headers ... ok [INFO] [stdout] test faidx::tests::faidx_read_twice_bytes ... ok [INFO] [stdout] test bam::record::tests::test_cigar_parse ... ok [INFO] [stderr] [E::idx_find_and_load] Could not retrieve index file for 'test/test.bam' [INFO] [stdout] test bgzf::tests::test_set_threadpool ... ok [INFO] [stderr] [E::idx_find_and_load] Could not retrieve index file for 'test/test_left.vcf' [INFO] [stdout] test tbx::tests::bed_fetch_from_chr1_read_api ... ok [INFO] [stderr] [E::hts_idx_load3] Could not load local index file 'test/tabix_reader/bad_header.txt.gz.tbi' [INFO] [stdout] test bcf::tests::test_header_info_types ... ok [INFO] [stdout] test tbx::tests::test_fails_on_bam ... ok [INFO] [stdout] test tbx::tests::test_fails_on_non_existiant ... ok [INFO] [stdout] test tbx::tests::bed_fetch_from_chr1_iterator_api ... ok [INFO] [stdout] test tbx::tests::test_fails_on_vcf ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_first_base ... ok [INFO] [stdout] test tbx::tests::test_text_bad_header ... ok [INFO] [stdout] test bcf::tests::test_reader_set_threads ... ok [INFO] [stdout] test bcf::tests::test_remove_alleles ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_start ... ok [INFO] [stdout] test tbx::tests::bed_basic ... ok [INFO] [stdout] test tbx::tests::test_text_header_positions ... ok [INFO] [stdout] test bam::tests::test_write_cram ... ok [INFO] [stdout] test bam::ext::tests::test_infer_seq_len ... ok [INFO] [stdout] test bam::tests::test_write_compression ... ok [INFO] [stdout] test tbx::tests::test_text_header_regions ... ok [INFO] [stdout] test faidx::tests::faidx_read_twice_string ... ok [INFO] [stdout] test bam::tests::test_write ... ok [INFO] [stdout] test bcf::tests::test_synced_reader_fetch ... ok [INFO] [stdout] test bcf::tests::test_fetch ... ok [INFO] [stdout] test bcf::tests::test_synced_reader ... ok [INFO] [stdout] test bcf::tests::test_writer_set_threads ... ok [INFO] [stdout] test bcf::tests::test_multi_string_info_tag_number_a ... ok [INFO] [stdout] test bcf::tests::test_write ... ok [INFO] [stdout] test bcf::tests::test_multi_string_info_tag ... ok [INFO] [stdout] test bam::tests::test_idx_pileup ... ok [INFO] [stdout] test bam::pileup::tests::test_max_pileup_to_high ... ok [INFO] [stdout] test bam::index::tests::test_index_build ... FAILED [INFO] [stdout] test bam::tests::test_sam_writer_example ... FAILED [INFO] [stdout] test bam::ext::tests::test_aligned_pairs_full ... ok [INFO] [stdout] test bam::tests::test_write_threaded ... ok [INFO] [stdout] test bam::tests::test_write_shared_tpool ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- bam::index::tests::test_index_build stdout ---- [INFO] [stdout] thread 'bam::index::tests::test_index_build' panicked at 'called `Result::unwrap()` on an `Err` value: BamWriteIndex', src/bam/index.rs:72:51 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5560995185e0 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x5560995185e0 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5560995185e0 - std[77c0456e0eb29f0c]::sys_common::backtrace::_print_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x5560995185e0 - ::fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55609953c00c - core[ee1ca6415511a9c4]::fmt::write [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/fmt/mod.rs:1110:17 [INFO] [stdout] 5: 0x556099514e45 - as std[77c0456e0eb29f0c]::io::Write>::write_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/io/mod.rs:1584:15 [INFO] [stdout] 6: 0x55609951abfb - std[77c0456e0eb29f0c]::sys_common::backtrace::_print [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55609951abfb - std[77c0456e0eb29f0c]::sys_common::backtrace::print [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55609951abfb - std[77c0456e0eb29f0c]::panicking::default_hook::{closure#1} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55609951a70c - std[77c0456e0eb29f0c]::panicking::default_hook [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55609951b2a1 - std[77c0456e0eb29f0c]::panicking::rust_panic_with_hook [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x55609951ada7 - std[77c0456e0eb29f0c]::panicking::begin_panic_handler::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x556099518adc - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55609951ad09 - rust_begin_unwind [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x556098e69921 - core[ee1ca6415511a9c4]::panicking::panic_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x556098e69a13 - core[ee1ca6415511a9c4]::result::unwrap_failed [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/result.rs:1355:5 [INFO] [stdout] 16: 0x556098f46e13 - >::unwrap [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/result.rs:1037:23 [INFO] [stdout] 17: 0x556098fe6ca4 - rust_htslib[660f8dbe02e2b308]::bam::index::tests::test_index_build [INFO] [stdout] at /opt/rustwide/workdir/src/bam/index.rs:72:9 [INFO] [stdout] 18: 0x556098fe6bda - rust_htslib[660f8dbe02e2b308]::bam::index::tests::test_index_build::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/src/bam/index.rs:67:5 [INFO] [stdout] 19: 0x556098f763ce - >::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55609906d793 - >::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55609906d793 - test[eeb9024d9ac7bc83]::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:577:5 [INFO] [stdout] 22: 0x55609906c25c - + core[ee1ca6415511a9c4]::marker::Send> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 23: 0x55609906c25c - + core[ee1ca6415511a9c4]::marker::Send>> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:346:9 [INFO] [stdout] 24: 0x55609906c25c - std[77c0456e0eb29f0c]::panicking::try::do_call:: + core[ee1ca6415511a9c4]::marker::Send>>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 25: 0x55609906c25c - std[77c0456e0eb29f0c]::panicking::try::<(), std[77c0456e0eb29f0c]::panic::AssertUnwindSafe + core[ee1ca6415511a9c4]::marker::Send>>> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 26: 0x55609906c25c - std[77c0456e0eb29f0c]::panic::catch_unwind:: + core[ee1ca6415511a9c4]::marker::Send>>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stdout] 27: 0x55609906c25c - test[eeb9024d9ac7bc83]::run_test_in_process [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:600:18 [INFO] [stdout] 28: 0x55609906c25c - test[eeb9024d9ac7bc83]::run_test::run_test_inner::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:492:39 [INFO] [stdout] 29: 0x55609904bf22 - test[eeb9024d9ac7bc83]::run_test::run_test_inner::{closure#1} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:519:37 [INFO] [stdout] 30: 0x55609904bf22 - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 31: 0x55609904c808 - ::spawn_unchecked::::{closure#0}::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 32: 0x55609904c808 - ::spawn_unchecked::{closure#0}::{closure#0}> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:346:9 [INFO] [stdout] 33: 0x55609904c808 - std[77c0456e0eb29f0c]::panicking::try::do_call::::spawn_unchecked::{closure#0}::{closure#0}>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 34: 0x55609904c808 - std[77c0456e0eb29f0c]::panicking::try::<(), std[77c0456e0eb29f0c]::panic::AssertUnwindSafe<::spawn_unchecked::{closure#0}::{closure#0}>> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 35: 0x55609904c808 - std[77c0456e0eb29f0c]::panic::catch_unwind::::spawn_unchecked::{closure#0}::{closure#0}>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stdout] 36: 0x55609904c808 - ::spawn_unchecked::::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 37: 0x55609904c808 - <::spawn_unchecked::{closure#0} as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x5560995208e7 - > as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 39: 0x5560995208e7 - >> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 40: 0x5560995208e7 - ::new::thread_start [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 41: 0x7f50e7ed7609 - start_thread [INFO] [stdout] 42: 0x7f50e7ca7293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- bam::tests::test_sam_writer_example stdout ---- [INFO] [stdout] thread 'bam::tests::test_sam_writer_example' panicked at 'called `Result::unwrap()` on an `Err` value: BamOpen { target: "./test/bam2sam_out.sam" }', src/bam/mod.rs:2255:83 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5560995185e0 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x5560995185e0 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5560995185e0 - std[77c0456e0eb29f0c]::sys_common::backtrace::_print_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x5560995185e0 - ::fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55609953c00c - core[ee1ca6415511a9c4]::fmt::write [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/fmt/mod.rs:1110:17 [INFO] [stdout] 5: 0x556099514e45 - as std[77c0456e0eb29f0c]::io::Write>::write_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/io/mod.rs:1584:15 [INFO] [stdout] 6: 0x55609951abfb - std[77c0456e0eb29f0c]::sys_common::backtrace::_print [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55609951abfb - std[77c0456e0eb29f0c]::sys_common::backtrace::print [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55609951abfb - std[77c0456e0eb29f0c]::panicking::default_hook::{closure#1} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55609951a70c - std[77c0456e0eb29f0c]::panicking::default_hook [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55609951b2a1 - std[77c0456e0eb29f0c]::panicking::rust_panic_with_hook [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x55609951ada7 - std[77c0456e0eb29f0c]::panicking::begin_panic_handler::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x556099518adc - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55609951ad09 - rust_begin_unwind [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x556098e69921 - core[ee1ca6415511a9c4]::panicking::panic_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x556098e69a13 - core[ee1ca6415511a9c4]::result::unwrap_failed [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/result.rs:1355:5 [INFO] [stdout] 16: 0x556098f4540f - >::unwrap [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/result.rs:1037:23 [INFO] [stdout] 17: 0x556098fdba87 - rust_htslib[660f8dbe02e2b308]::bam::tests::test_sam_writer_example::from_bam_with_filter:: [INFO] [stdout] at /opt/rustwide/workdir/src/bam/mod.rs:2255:34 [INFO] [stdout] 18: 0x556098fdb4f5 - rust_htslib[660f8dbe02e2b308]::bam::tests::test_sam_writer_example [INFO] [stdout] at /opt/rustwide/workdir/src/bam/mod.rs:2278:22 [INFO] [stdout] 19: 0x556098fdb46a - rust_htslib[660f8dbe02e2b308]::bam::tests::test_sam_writer_example::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/src/bam/mod.rs:2248:5 [INFO] [stdout] 20: 0x556098f7534e - >::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55609906d793 - >::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x55609906d793 - test[eeb9024d9ac7bc83]::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:577:5 [INFO] [stdout] 23: 0x55609906c25c - + core[ee1ca6415511a9c4]::marker::Send> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 24: 0x55609906c25c - + core[ee1ca6415511a9c4]::marker::Send>> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:346:9 [INFO] [stdout] 25: 0x55609906c25c - std[77c0456e0eb29f0c]::panicking::try::do_call:: + core[ee1ca6415511a9c4]::marker::Send>>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 26: 0x55609906c25c - std[77c0456e0eb29f0c]::panicking::try::<(), std[77c0456e0eb29f0c]::panic::AssertUnwindSafe + core[ee1ca6415511a9c4]::marker::Send>>> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 27: 0x55609906c25c - std[77c0456e0eb29f0c]::panic::catch_unwind:: + core[ee1ca6415511a9c4]::marker::Send>>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stdout] 28: 0x55609906c25c - test[eeb9024d9ac7bc83]::run_test_in_process [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:600:18 [INFO] [stdout] 29: 0x55609906c25c - test[eeb9024d9ac7bc83]::run_test::run_test_inner::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:492:39 [INFO] [stdout] 30: 0x55609904bf22 - test[eeb9024d9ac7bc83]::run_test::run_test_inner::{closure#1} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:519:37 [INFO] [stdout] 31: 0x55609904bf22 - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x55609904c808 - ::spawn_unchecked::::{closure#0}::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 33: 0x55609904c808 - ::spawn_unchecked::{closure#0}::{closure#0}> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:346:9 [INFO] [stdout] 34: 0x55609904c808 - std[77c0456e0eb29f0c]::panicking::try::do_call::::spawn_unchecked::{closure#0}::{closure#0}>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 35: 0x55609904c808 - std[77c0456e0eb29f0c]::panicking::try::<(), std[77c0456e0eb29f0c]::panic::AssertUnwindSafe<::spawn_unchecked::{closure#0}::{closure#0}>> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 36: 0x55609904c808 - std[77c0456e0eb29f0c]::panic::catch_unwind::::spawn_unchecked::{closure#0}::{closure#0}>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stdout] 37: 0x55609904c808 - ::spawn_unchecked::::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 38: 0x55609904c808 - <::spawn_unchecked::{closure#0} as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x5560995208e7 - > as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 40: 0x5560995208e7 - >> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 41: 0x5560995208e7 - ::new::thread_start [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 42: 0x7f50e7ed7609 - start_thread [INFO] [stdout] 43: 0x7f50e7ca7293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] bam::index::tests::test_index_build [INFO] [stdout] bam::tests::test_sam_writer_example [INFO] [stdout] [INFO] [stdout] test result: FAILED. 99 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.36s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "1b4849800a6727db03929fdbaae0691eaf789c7046ab5b29337d292299a00a28", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1b4849800a6727db03929fdbaae0691eaf789c7046ab5b29337d292299a00a28", kill_on_drop: false }` [INFO] [stdout] 1b4849800a6727db03929fdbaae0691eaf789c7046ab5b29337d292299a00a28