[INFO] fetching crate d4-hts 0.2.17... [INFO] testing d4-hts-0.2.17 against try#ce59db7a1b1b012fb2793c4641c1bdecad7a128b for pr-85530 [INFO] extracting crate d4-hts 0.2.17 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate d4-hts 0.2.17 on toolchain ce59db7a1b1b012fb2793c4641c1bdecad7a128b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4-hts 0.2.17 [INFO] finished tweaking crates.io crate d4-hts 0.2.17 [INFO] tweaked toml for crates.io crate d4-hts 0.2.17 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 80f937d072dd3493d1010f52e902629043778d886cdcaad34a1b0ab22c5aa853 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "80f937d072dd3493d1010f52e902629043778d886cdcaad34a1b0ab22c5aa853", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "80f937d072dd3493d1010f52e902629043778d886cdcaad34a1b0ab22c5aa853", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80f937d072dd3493d1010f52e902629043778d886cdcaad34a1b0ab22c5aa853", kill_on_drop: false }` [INFO] [stdout] 80f937d072dd3493d1010f52e902629043778d886cdcaad34a1b0ab22c5aa853 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d8de54864a7a20bff4cd6e541d7ae9acd4a44b8af363f412973fe3466d1bcd07 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d8de54864a7a20bff4cd6e541d7ae9acd4a44b8af363f412973fe3466d1bcd07", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling d4-hts v0.2.17 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.17 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-315a0e163f22d43c/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-402a83e79e387521/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-402a83e79e387521/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55c355070400 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::libunwind::trace [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55c355070400 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55c355070400 - std[77c0456e0eb29f0c]::sys_common::backtrace::_print_fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55c355070400 - ::fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55c355094f2c - core[ee1ca6415511a9c4]::fmt::write [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/fmt/mod.rs:1110:17 [INFO] [stderr] 5: 0x55c35506d305 - ::write_fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/io/mod.rs:1584:15 [INFO] [stderr] 6: 0x55c35507268b - std[77c0456e0eb29f0c]::sys_common::backtrace::_print [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55c35507268b - std[77c0456e0eb29f0c]::sys_common::backtrace::print [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55c35507268b - std[77c0456e0eb29f0c]::panicking::default_hook::{closure#1} [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55c355072161 - std[77c0456e0eb29f0c]::panicking::default_hook [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55c355072d31 - std[77c0456e0eb29f0c]::panicking::rust_panic_with_hook [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55c355072807 - std[77c0456e0eb29f0c]::panicking::begin_panic_handler::{closure#0} [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x55c3550708fc - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_end_short_backtrace:: [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55c355072799 - rust_begin_unwind [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x55c354b34861 - core[ee1ca6415511a9c4]::panicking::panic_fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55c354b347ad - core[ee1ca6415511a9c4]::panicking::panic [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55c354b3828d - build_script_build[d57655dd417a790b]::build_own_htslib [INFO] [stderr] at /opt/rustwide/workdir/build.rs:33:5 [INFO] [stderr] 17: 0x55c354b386ee - build_script_build[d57655dd417a790b]::main [INFO] [stderr] at /opt/rustwide/workdir/build.rs:65:9 [INFO] [stderr] 18: 0x55c354b370fb - core[ee1ca6415511a9c4]::result::Result<(), std[77c0456e0eb29f0c]::io::error::Error> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55c354b39ece - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_begin_short_backtrace:: core[ee1ca6415511a9c4]::result::Result<(), std[77c0456e0eb29f0c]::io::error::Error>, core[ee1ca6415511a9c4]::result::Result<(), std[77c0456e0eb29f0c]::io::error::Error>> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55c354b36e11 - std[77c0456e0eb29f0c]::rt::lang_start::>::{closure#0} [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/rt.rs:49:18 [INFO] [stderr] 21: 0x55c355073229 - <&dyn core[ee1ca6415511a9c4]::ops::function::Fn<(), Output = i32> + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55c355073229 - std[77c0456e0eb29f0c]::panicking::try::do_call::<&dyn core[ee1ca6415511a9c4]::ops::function::Fn<(), Output = i32> + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync, i32> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x55c355073229 - std[77c0456e0eb29f0c]::panicking::try:: + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x55c355073229 - std[77c0456e0eb29f0c]::panic::catch_unwind::<&dyn core[ee1ca6415511a9c4]::ops::function::Fn<(), Output = i32> + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync, i32> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stderr] 25: 0x55c355073229 - std[77c0456e0eb29f0c]::rt::lang_start_internal [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/rt.rs:34:21 [INFO] [stderr] 26: 0x55c354b36d00 - std[77c0456e0eb29f0c]::rt::lang_start::> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/rt.rs:48:5 [INFO] [stderr] 27: 0x55c354b38d3c - main [INFO] [stderr] 28: 0x7f7fc3c4e0b3 - __libc_start_main [INFO] [stderr] 29: 0x55c354b3505e - _start [INFO] [stderr] 30: 0x0 - [INFO] running `Command { std: "docker" "inspect" "d8de54864a7a20bff4cd6e541d7ae9acd4a44b8af363f412973fe3466d1bcd07", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d8de54864a7a20bff4cd6e541d7ae9acd4a44b8af363f412973fe3466d1bcd07", kill_on_drop: false }` [INFO] [stdout] d8de54864a7a20bff4cd6e541d7ae9acd4a44b8af363f412973fe3466d1bcd07