[INFO] cloning repository https://github.com/wtzhang23/bamgen [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/wtzhang23/bamgen" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwtzhang23%2Fbamgen", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwtzhang23%2Fbamgen'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 3d59832e20c0d9c88e0ea1a9b5a2cc5edb044927 [INFO] testing wtzhang23/bamgen against try#ce59db7a1b1b012fb2793c4641c1bdecad7a128b for pr-85530 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwtzhang23%2Fbamgen" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/wtzhang23/bamgen on toolchain ce59db7a1b1b012fb2793c4641c1bdecad7a128b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/wtzhang23/bamgen [INFO] finished tweaking git repo https://github.com/wtzhang23/bamgen [INFO] tweaked toml for git repo https://github.com/wtzhang23/bamgen written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/wtzhang23/bamgen already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded ron v0.6.2 [INFO] [stderr] Downloaded bio-types v0.7.0 [INFO] [stderr] Downloaded bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded cc v1.0.60 [INFO] [stderr] Downloaded rust-htslib v0.32.0 [INFO] [stderr] Downloaded serde_derive v1.0.116 [INFO] [stderr] Downloaded lzma-sys v0.1.16 [INFO] [stderr] Downloaded hts-sys v1.10.3 [INFO] [stderr] Downloaded curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Downloaded libc v0.2.79 [INFO] [stderr] Downloaded openssl-src v111.11.0+1.1.1h [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3892afbeba427fd9128e1d62bb8811240a939f8b98c47b0c380cac4d1c3fa8a9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3892afbeba427fd9128e1d62bb8811240a939f8b98c47b0c380cac4d1c3fa8a9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3892afbeba427fd9128e1d62bb8811240a939f8b98c47b0c380cac4d1c3fa8a9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3892afbeba427fd9128e1d62bb8811240a939f8b98c47b0c380cac4d1c3fa8a9", kill_on_drop: false }` [INFO] [stdout] 3892afbeba427fd9128e1d62bb8811240a939f8b98c47b0c380cac4d1c3fa8a9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c874464879a72fa1f2c2f00a853f70ff20c87a687a313ca1a3d2a29443d743be [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "c874464879a72fa1f2c2f00a853f70ff20c87a687a313ca1a3d2a29443d743be", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.42 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling tinyvec v0.3.4 [INFO] [stderr] Compiling matches v0.1.8 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling base64 v0.12.3 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling termcolor v1.1.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling unicode-bidi v0.3.4 [INFO] [stderr] Compiling textwrap v0.12.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling unicode-normalization v0.1.13 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling cc v1.0.60 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling url v2.1.1 [INFO] [stderr] Compiling openssl-src v111.11.0+1.1.1h [INFO] [stderr] Compiling openssl-sys v0.9.58 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Compiling lzma-sys v0.1.16 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling hts-sys v1.10.3 [INFO] [stderr] Compiling thiserror-impl v1.0.20 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling clap_derive v3.0.0-beta.2 [INFO] [stderr] Compiling thiserror v1.0.20 [INFO] [stderr] Compiling clap v3.0.0-beta.2 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling ron v0.6.2 [INFO] [stderr] Compiling rust-htslib v0.32.0 [INFO] [stderr] Compiling bamgen v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 03s [INFO] running `Command { std: "docker" "inspect" "c874464879a72fa1f2c2f00a853f70ff20c87a687a313ca1a3d2a29443d743be", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c874464879a72fa1f2c2f00a853f70ff20c87a687a313ca1a3d2a29443d743be", kill_on_drop: false }` [INFO] [stdout] c874464879a72fa1f2c2f00a853f70ff20c87a687a313ca1a3d2a29443d743be [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c07b7ec1f151c1446dc2eea7eaf8d09c8a8331172930ea84aeb867a0ea40ac98 [INFO] running `Command { std: "docker" "start" "-a" "c07b7ec1f151c1446dc2eea7eaf8d09c8a8331172930ea84aeb867a0ea40ac98", kill_on_drop: false }` [INFO] [stderr] Compiling bamgen v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.11s [INFO] running `Command { std: "docker" "inspect" "c07b7ec1f151c1446dc2eea7eaf8d09c8a8331172930ea84aeb867a0ea40ac98", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c07b7ec1f151c1446dc2eea7eaf8d09c8a8331172930ea84aeb867a0ea40ac98", kill_on_drop: false }` [INFO] [stdout] c07b7ec1f151c1446dc2eea7eaf8d09c8a8331172930ea84aeb867a0ea40ac98 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7ae22177c5587e5ce5a77510fadfdbb1a102eed95488f0c65110e074755b1554 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7ae22177c5587e5ce5a77510fadfdbb1a102eed95488f0c65110e074755b1554", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/bamgen-bb884e0b84fe5d10) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "7ae22177c5587e5ce5a77510fadfdbb1a102eed95488f0c65110e074755b1554", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7ae22177c5587e5ce5a77510fadfdbb1a102eed95488f0c65110e074755b1554", kill_on_drop: false }` [INFO] [stdout] 7ae22177c5587e5ce5a77510fadfdbb1a102eed95488f0c65110e074755b1554