[INFO] cloning repository https://github.com/guertinlab/seqOutBias [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/seqOutBias" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 0c066d9c0c5416253989f112b3ae3f87005a75c3 [INFO] testing guertinlab/seqOutBias against try#ce59db7a1b1b012fb2793c4641c1bdecad7a128b for pr-85530 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-5/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/guertinlab/seqOutBias on toolchain ce59db7a1b1b012fb2793c4641c1bdecad7a128b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/guertinlab/seqOutBias [INFO] finished tweaking git repo https://github.com/guertinlab/seqOutBias [INFO] tweaked toml for git repo https://github.com/guertinlab/seqOutBias written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate git repo https://github.com/guertinlab/seqOutBias already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded cbindgen v0.13.2 [INFO] [stderr] Downloaded itertools v0.6.0 [INFO] [stderr] Downloaded assert_cmd v0.4.0 [INFO] [stderr] Downloaded bincode v0.5.9 [INFO] [stderr] Downloaded flate2 v0.2.18 [INFO] [stderr] Downloaded predicates v0.5.2 [INFO] [stderr] Downloaded ieee754 v0.2.2 [INFO] [stderr] Downloaded escargot v0.2.0 [INFO] [stderr] Downloaded rust-htslib v0.12.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7f6cb3dbf0f974d755612b415e3a7ce1d55e1f830e993b159c6b1e6883b25a90 [INFO] running `Command { std: "docker" "start" "-a" "7f6cb3dbf0f974d755612b415e3a7ce1d55e1f830e993b159c6b1e6883b25a90", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7f6cb3dbf0f974d755612b415e3a7ce1d55e1f830e993b159c6b1e6883b25a90", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7f6cb3dbf0f974d755612b415e3a7ce1d55e1f830e993b159c6b1e6883b25a90", kill_on_drop: false }` [INFO] [stdout] 7f6cb3dbf0f974d755612b415e3a7ce1d55e1f830e993b159c6b1e6883b25a90 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f17759adbf33b7c50d304a26faa013e4e293c05b2ba54ee6f65ca0ae67df0d58 [INFO] running `Command { std: "docker" "start" "-a" "f17759adbf33b7c50d304a26faa013e4e293c05b2ba54ee6f65ca0ae67df0d58", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.92 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.68 [INFO] [stderr] Compiling fnv v1.0.7 [INFO] [stderr] Compiling gcc v0.3.45 [INFO] [stderr] Compiling ident_case v1.0.1 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Compiling either v1.1.0 [INFO] [stderr] Compiling utf8-ranges v0.1.3 [INFO] [stderr] Compiling regex-syntax v0.3.9 [INFO] [stderr] Compiling rust-htslib v0.12.1 [INFO] [stderr] Compiling lazy_static v0.2.6 [INFO] [stderr] Compiling percent-encoding v1.0.0 [INFO] [stderr] Compiling rustc-serialize v0.3.23 [INFO] [stderr] Compiling num-traits v0.1.37 [INFO] [stderr] Compiling quick-error v1.2.0 [INFO] [stderr] Compiling serde v0.7.15 [INFO] [stderr] Compiling ieee754 v0.2.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling idna v0.1.2 [INFO] [stderr] Compiling seqOutBias v1.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling itertools v0.6.0 [INFO] [stderr] Compiling miniz-sys v0.1.9 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling url v1.7.2 [INFO] [stderr] Compiling memchr v0.1.11 [INFO] [stderr] Compiling thread-id v2.0.0 [INFO] [stderr] Compiling rand v0.4.3 [INFO] [stderr] Compiling thread_local v0.2.7 [INFO] [stderr] Compiling aho-corasick v0.5.3 [INFO] [stderr] Compiling flate2 v0.2.18 [INFO] [stderr] Compiling regex v0.1.80 [INFO] [stderr] Compiling rand v0.3.22 [INFO] [stderr] Compiling bincode v0.5.9 [INFO] [stderr] Compiling tempfile v2.2.0 [INFO] [stderr] Compiling docopt v0.6.86 [INFO] [stdout] error: could not find native static library `hts`, perhaps an -L flag is missing? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `rust-htslib` [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "f17759adbf33b7c50d304a26faa013e4e293c05b2ba54ee6f65ca0ae67df0d58", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f17759adbf33b7c50d304a26faa013e4e293c05b2ba54ee6f65ca0ae67df0d58", kill_on_drop: false }` [INFO] [stdout] f17759adbf33b7c50d304a26faa013e4e293c05b2ba54ee6f65ca0ae67df0d58