[INFO] cloning repository https://github.com/chfi/rust-qtlreaper [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rust-qtlreaper" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8d650921ec4aec63c42068de58b91579228f57b1 [INFO] testing chfi/rust-qtlreaper against try#ce59db7a1b1b012fb2793c4641c1bdecad7a128b for pr-85530 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/chfi/rust-qtlreaper on toolchain ce59db7a1b1b012fb2793c4641c1bdecad7a128b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/chfi/rust-qtlreaper [INFO] finished tweaking git repo https://github.com/chfi/rust-qtlreaper [INFO] tweaked toml for git repo https://github.com/chfi/rust-qtlreaper written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/chfi/rust-qtlreaper already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1d5837954c2343abd08187667a2c9e4ad6dff403faeb953ca3bc685488c14349 [INFO] running `Command { std: "docker" "start" "-a" "1d5837954c2343abd08187667a2c9e4ad6dff403faeb953ca3bc685488c14349", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1d5837954c2343abd08187667a2c9e4ad6dff403faeb953ca3bc685488c14349", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1d5837954c2343abd08187667a2c9e4ad6dff403faeb953ca3bc685488c14349", kill_on_drop: false }` [INFO] [stdout] 1d5837954c2343abd08187667a2c9e4ad6dff403faeb953ca3bc685488c14349 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4ecaea224f26b81a393b4ef6891c73a73cf3596a0ba64dd849bb89ac50fb12f2 [INFO] running `Command { std: "docker" "start" "-a" "4ecaea224f26b81a393b4ef6891c73a73cf3596a0ba64dd849bb89ac50fb12f2", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v0.1.6 [INFO] [stderr] Compiling libc v0.2.54 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.34 [INFO] [stderr] Compiling arrayvec v0.4.10 [INFO] [stderr] Compiling cfg-if v0.1.9 [INFO] [stderr] Compiling nodrop v0.1.13 [INFO] [stderr] Compiling scopeguard v0.3.3 [INFO] [stderr] Compiling lazy_static v1.3.0 [INFO] [stderr] Compiling memoffset v0.2.1 [INFO] [stderr] Compiling rayon-core v1.4.1 [INFO] [stderr] Compiling unicode-segmentation v1.3.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ryu v0.2.8 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling serde v1.0.91 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling bitflags v1.0.4 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling rayon v1.0.3 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_jitter v0.1.4 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling crossbeam-utils v0.2.2 [INFO] [stderr] Compiling rand_xorshift v0.1.1 [INFO] [stderr] Compiling rand_hc v0.1.0 [INFO] [stderr] Compiling rand_isaac v0.1.1 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling num_cpus v1.10.0 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling crossbeam-epoch v0.3.1 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling crossbeam-deque v0.2.0 [INFO] [stderr] Compiling serde_derive v1.0.91 [INFO] [stderr] Compiling structopt-derive v0.2.15 [INFO] [stderr] Compiling structopt v0.2.15 [INFO] [stderr] Compiling serde_json v1.0.39 [INFO] [stderr] Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/lib.rs:5:22 [INFO] [stdout] | [INFO] [stdout] 5 | #[macro_use(s, azip, array)] [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stdout] --> src/regression.rs:5:1 [INFO] [stdout] | [INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `regression_2n_variance` [INFO] [stdout] --> src/regression.rs:250:4 [INFO] [stdout] | [INFO] [stdout] 250 | fn regression_2n_variance( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 43.08s [INFO] running `Command { std: "docker" "inspect" "4ecaea224f26b81a393b4ef6891c73a73cf3596a0ba64dd849bb89ac50fb12f2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4ecaea224f26b81a393b4ef6891c73a73cf3596a0ba64dd849bb89ac50fb12f2", kill_on_drop: false }` [INFO] [stdout] 4ecaea224f26b81a393b4ef6891c73a73cf3596a0ba64dd849bb89ac50fb12f2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 98289feb947ad64476e40059fcb8e52f090a9145b65cf9a167fda95d6f444610 [INFO] running `Command { std: "docker" "start" "-a" "98289feb947ad64476e40059fcb8e52f090a9145b65cf9a167fda95d6f444610", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/lib.rs:5:22 [INFO] [stdout] | [INFO] [stdout] 5 | #[macro_use(s, azip, array)] [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stdout] --> src/regression.rs:5:1 [INFO] [stdout] | [INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `regression_2n_variance` [INFO] [stdout] --> src/regression.rs:250:4 [INFO] [stdout] | [INFO] [stdout] 250 | fn regression_2n_variance( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stdout] --> src/regression.rs:5:1 [INFO] [stdout] | [INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `regression_2n_variance` [INFO] [stdout] --> src/regression.rs:250:4 [INFO] [stdout] | [INFO] [stdout] 250 | fn regression_2n_variance( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.62s [INFO] running `Command { std: "docker" "inspect" "98289feb947ad64476e40059fcb8e52f090a9145b65cf9a167fda95d6f444610", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98289feb947ad64476e40059fcb8e52f090a9145b65cf9a167fda95d6f444610", kill_on_drop: false }` [INFO] [stdout] 98289feb947ad64476e40059fcb8e52f090a9145b65cf9a167fda95d6f444610 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 6bdcfeb0f50efb343559c207ed38501e9d0d60a08d23c2eb3c7ee518fc87151d [INFO] running `Command { std: "docker" "start" "-a" "6bdcfeb0f50efb343559c207ed38501e9d0d60a08d23c2eb3c7ee518fc87151d", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] warning: unused `#[macro_use]` import [INFO] [stderr] --> src/lib.rs:5:22 [INFO] [stderr] | [INFO] [stderr] 5 | #[macro_use(s, azip, array)] [INFO] [stderr] | ^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stderr] --> src/regression.rs:5:1 [INFO] [stderr] | [INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: function is never used: `regression_2n_variance` [INFO] [stderr] --> src/regression.rs:250:4 [INFO] [stderr] | [INFO] [stderr] 250 | fn regression_2n_variance( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 3 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stderr] --> src/regression.rs:5:1 [INFO] [stderr] | [INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: function is never used: `regression_2n_variance` [INFO] [stderr] --> src/regression.rs:250:4 [INFO] [stderr] | [INFO] [stderr] 250 | fn regression_2n_variance( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 2 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2m 45s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/qtlreaper-49376d348b27a8ba) [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test geneobject::tests::it_can_parse_header ... ok [INFO] [stdout] test geneobject::tests::it_can_parse_metadata ... ok [INFO] [stdout] test geneobject::tests::it_can_estimate_unknown_genotypes ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- geneobject::tests::it_can_estimate_unknown_genotypes stdout ---- [INFO] [stdout] thread 'geneobject::tests::it_can_estimate_unknown_genotypes' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627406, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.32233300305265566, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`, [INFO] [stdout] right: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627405, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.3223330030526561, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`', src/geneobject.rs:895:9 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56195208c430 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x56195208c430 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x56195208c430 - std[77c0456e0eb29f0c]::sys_common::backtrace::_print_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x56195208c430 - ::fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x5619520aec0c - core[ee1ca6415511a9c4]::fmt::write [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/fmt/mod.rs:1110:17 [INFO] [stdout] 5: 0x561952089375 - as std[77c0456e0eb29f0c]::io::Write>::write_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/io/mod.rs:1584:15 [INFO] [stdout] 6: 0x56195208e5bb - std[77c0456e0eb29f0c]::sys_common::backtrace::_print [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x56195208e5bb - std[77c0456e0eb29f0c]::sys_common::backtrace::print [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x56195208e5bb - std[77c0456e0eb29f0c]::panicking::default_hook::{closure#1} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x56195208e0cc - std[77c0456e0eb29f0c]::panicking::default_hook [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x56195208ec61 - std[77c0456e0eb29f0c]::panicking::rust_panic_with_hook [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x56195208e767 - std[77c0456e0eb29f0c]::panicking::begin_panic_handler::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x56195208c92c - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x56195208e6c9 - rust_begin_unwind [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x561951ff54b1 - core[ee1ca6415511a9c4]::panicking::panic_fmt [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x5619520ad528 - core[ee1ca6415511a9c4]::panicking::assert_failed_inner [INFO] [stdout] 16: 0x56195200fcca - core[ee1ca6415511a9c4]::panicking::assert_failed::, alloc[cda43b294bbfc5d0]::vec::Vec> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:117:5 [INFO] [stdout] 17: 0x561952026dbc - qtlreaper[15de311967e38ede]::geneobject::tests::it_can_estimate_unknown_genotypes [INFO] [stdout] at /opt/rustwide/workdir/src/geneobject.rs:895:9 [INFO] [stdout] 18: 0x56195202486a - qtlreaper[15de311967e38ede]::geneobject::tests::it_can_estimate_unknown_genotypes::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/src/geneobject.rs:808:5 [INFO] [stdout] 19: 0x561951fff99e - >::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x56195204d563 - >::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x56195204d563 - test[eeb9024d9ac7bc83]::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:577:5 [INFO] [stdout] 22: 0x56195204c02c - + core[ee1ca6415511a9c4]::marker::Send> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 23: 0x56195204c02c - + core[ee1ca6415511a9c4]::marker::Send>> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:346:9 [INFO] [stdout] 24: 0x56195204c02c - std[77c0456e0eb29f0c]::panicking::try::do_call:: + core[ee1ca6415511a9c4]::marker::Send>>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 25: 0x56195204c02c - std[77c0456e0eb29f0c]::panicking::try::<(), std[77c0456e0eb29f0c]::panic::AssertUnwindSafe + core[ee1ca6415511a9c4]::marker::Send>>> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 26: 0x56195204c02c - std[77c0456e0eb29f0c]::panic::catch_unwind:: + core[ee1ca6415511a9c4]::marker::Send>>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stdout] 27: 0x56195204c02c - test[eeb9024d9ac7bc83]::run_test_in_process [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:600:18 [INFO] [stdout] 28: 0x56195204c02c - test[eeb9024d9ac7bc83]::run_test::run_test_inner::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:492:39 [INFO] [stdout] 29: 0x56195202bcf2 - test[eeb9024d9ac7bc83]::run_test::run_test_inner::{closure#1} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/test/src/lib.rs:519:37 [INFO] [stdout] 30: 0x56195202bcf2 - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 31: 0x56195202c5d8 - ::spawn_unchecked::::{closure#0}::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 32: 0x56195202c5d8 - ::spawn_unchecked::{closure#0}::{closure#0}> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:346:9 [INFO] [stdout] 33: 0x56195202c5d8 - std[77c0456e0eb29f0c]::panicking::try::do_call::::spawn_unchecked::{closure#0}::{closure#0}>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 34: 0x56195202c5d8 - std[77c0456e0eb29f0c]::panicking::try::<(), std[77c0456e0eb29f0c]::panic::AssertUnwindSafe<::spawn_unchecked::{closure#0}::{closure#0}>> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 35: 0x56195202c5d8 - std[77c0456e0eb29f0c]::panic::catch_unwind::::spawn_unchecked::{closure#0}::{closure#0}>, ()> [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stdout] 36: 0x56195202c5d8 - ::spawn_unchecked::::{closure#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 37: 0x56195202c5d8 - <::spawn_unchecked::{closure#0} as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x561952093717 - > as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 39: 0x561952093717 - >> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/alloc/src/boxed.rs:1575:9 [INFO] [stdout] 40: 0x561952093717 - ::new::thread_start [INFO] [stdout] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 41: 0x7ffaa43e8609 - start_thread [INFO] [stdout] 42: 0x7ffaa41ba293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] geneobject::tests::it_can_estimate_unknown_genotypes [INFO] [stdout] [INFO] [stdout] test result: FAILED. 2 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "6bdcfeb0f50efb343559c207ed38501e9d0d60a08d23c2eb3c7ee518fc87151d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6bdcfeb0f50efb343559c207ed38501e9d0d60a08d23c2eb3c7ee518fc87151d", kill_on_drop: false }` [INFO] [stdout] 6bdcfeb0f50efb343559c207ed38501e9d0d60a08d23c2eb3c7ee518fc87151d