[INFO] cloning repository https://github.com/38/pyd4 [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 15f07e7e103cd4bd5474c7098c2c3d7a72ede2bd [INFO] testing 38/pyd4 against try#ce59db7a1b1b012fb2793c4641c1bdecad7a128b for pr-85530 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-5/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain ce59db7a1b1b012fb2793c4641c1bdecad7a128b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/38/pyd4 [INFO] finished tweaking git repo https://github.com/38/pyd4 [INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded inventory v0.1.9 [INFO] [stderr] Downloaded indoc v0.3.6 [INFO] [stderr] Downloaded indoc-impl v0.3.6 [INFO] [stderr] Downloaded crossbeam-channel v0.4.4 [INFO] [stderr] Downloaded rayon v1.4.0 [INFO] [stderr] Downloaded rayon-core v1.8.1 [INFO] [stderr] Downloaded ctor v0.1.15 [INFO] [stderr] Downloaded clang-sys v1.0.0 [INFO] [stderr] Downloaded d4-framefile v0.1.13 [INFO] [stderr] Downloaded pyo3-derive-backend v0.12.1 [INFO] [stderr] Downloaded pyo3cls v0.12.1 [INFO] [stderr] Downloaded libloading v0.6.3 [INFO] [stderr] Downloaded unindent v0.1.6 [INFO] [stderr] Downloaded d4 v0.1.13 [INFO] [stderr] Downloaded pyo3 v0.12.1 [INFO] [stderr] Downloaded d4-hts v0.1.13 [INFO] [stderr] Downloaded ghost v0.1.2 [INFO] [stderr] Downloaded inventory-impl v0.1.9 [INFO] [stderr] Downloaded bindgen v0.55.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 18b46bf540281f7a5a53fa4b86e98c308c7de19113793f5a85f8a14de447b191 [INFO] running `Command { std: "docker" "start" "-a" "18b46bf540281f7a5a53fa4b86e98c308c7de19113793f5a85f8a14de447b191", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "18b46bf540281f7a5a53fa4b86e98c308c7de19113793f5a85f8a14de447b191", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "18b46bf540281f7a5a53fa4b86e98c308c7de19113793f5a85f8a14de447b191", kill_on_drop: false }` [INFO] [stdout] 18b46bf540281f7a5a53fa4b86e98c308c7de19113793f5a85f8a14de447b191 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ce59db7a1b1b012fb2793c4641c1bdecad7a128b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 75c9073bdfd395e3b2fe6c9adfc2ebbc311d517d656f257da3acc2237408e04a [INFO] running `Command { std: "docker" "start" "-a" "75c9073bdfd395e3b2fe6c9adfc2ebbc311d517d656f257da3acc2237408e04a", kill_on_drop: false }` [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling termcolor v1.1.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling rayon-core v1.8.1 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling unindent v0.1.6 [INFO] [stderr] Compiling inventory v0.1.9 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling smallvec v1.4.2 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling pyo3 v0.12.1 [INFO] [stderr] Compiling clang-sys v1.0.0 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling instant v0.1.7 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling lock_api v0.4.1 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling miniz_oxide v0.4.2 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling parking_lot_core v0.8.0 [INFO] [stderr] Compiling memmap v0.7.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling parking_lot v0.11.0 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling crossbeam-channel v0.4.4 [INFO] [stderr] Compiling flate2 v1.0.17 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling d4-framefile v0.1.13 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Compiling pyo3-derive-backend v0.12.1 [INFO] [stderr] Compiling ghost v0.1.2 [INFO] [stderr] Compiling inventory-impl v0.1.9 [INFO] [stderr] Compiling ctor v0.1.15 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling pyo3cls v0.12.1 [INFO] [stderr] Compiling indoc v0.3.6 [INFO] [stderr] Compiling d4-hts v0.1.13 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.1.13` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-80966c83ebc07db0/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-4d31072ee6919533/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-4d31072ee6919533/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:34:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x557543c46a10 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::libunwind::trace [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x557543c46a10 - std[77c0456e0eb29f0c]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x557543c46a10 - std[77c0456e0eb29f0c]::sys_common::backtrace::_print_fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x557543c46a10 - ::fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x557543c6b88c - core[ee1ca6415511a9c4]::fmt::write [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/fmt/mod.rs:1110:17 [INFO] [stderr] 5: 0x557543c43905 - ::write_fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/io/mod.rs:1584:15 [INFO] [stderr] 6: 0x557543c48eeb - std[77c0456e0eb29f0c]::sys_common::backtrace::_print [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x557543c48eeb - std[77c0456e0eb29f0c]::sys_common::backtrace::print [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x557543c48eeb - std[77c0456e0eb29f0c]::panicking::default_hook::{closure#1} [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x557543c489c1 - std[77c0456e0eb29f0c]::panicking::default_hook [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x557543c49591 - std[77c0456e0eb29f0c]::panicking::rust_panic_with_hook [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x557543c49067 - std[77c0456e0eb29f0c]::panicking::begin_panic_handler::{closure#0} [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x557543c46f0c - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_end_short_backtrace:: [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x557543c48ff9 - rust_begin_unwind [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x5575436f1931 - core[ee1ca6415511a9c4]::panicking::panic_fmt [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x5575436f187d - core[ee1ca6415511a9c4]::panicking::panic [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x5575436f4aad - build_script_build[a746e6fd17fc5286]::build_own_htslib [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:34:5 [INFO] [stderr] 17: 0x5575436f4f0e - build_script_build[a746e6fd17fc5286]::main [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:66:9 [INFO] [stderr] 18: 0x5575436f419b - core[ee1ca6415511a9c4]::result::Result<(), std[77c0456e0eb29f0c]::io::error::Error> as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x5575436f2fae - std[77c0456e0eb29f0c]::sys_common::backtrace::__rust_begin_short_backtrace:: core[ee1ca6415511a9c4]::result::Result<(), std[77c0456e0eb29f0c]::io::error::Error>, core[ee1ca6415511a9c4]::result::Result<(), std[77c0456e0eb29f0c]::io::error::Error>> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x5575436f3ef1 - std[77c0456e0eb29f0c]::rt::lang_start::>::{closure#0} [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/rt.rs:49:18 [INFO] [stderr] 21: 0x557543c49b89 - <&dyn core[ee1ca6415511a9c4]::ops::function::Fn<(), Output = i32> + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync as core[ee1ca6415511a9c4]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x557543c49b89 - std[77c0456e0eb29f0c]::panicking::try::do_call::<&dyn core[ee1ca6415511a9c4]::ops::function::Fn<(), Output = i32> + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync, i32> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x557543c49b89 - std[77c0456e0eb29f0c]::panicking::try:: + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x557543c49b89 - std[77c0456e0eb29f0c]::panic::catch_unwind::<&dyn core[ee1ca6415511a9c4]::ops::function::Fn<(), Output = i32> + std[77c0456e0eb29f0c]::panic::RefUnwindSafe + core[ee1ca6415511a9c4]::marker::Sync, i32> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/panic.rs:433:14 [INFO] [stderr] 25: 0x557543c49b89 - std[77c0456e0eb29f0c]::rt::lang_start_internal [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/rt.rs:34:21 [INFO] [stderr] 26: 0x5575436f3de0 - std[77c0456e0eb29f0c]::rt::lang_start::> [INFO] [stderr] at /rustc/ce59db7a1b1b012fb2793c4641c1bdecad7a128b/library/std/src/rt.rs:48:5 [INFO] [stderr] 27: 0x5575436f555c - main [INFO] [stderr] 28: 0x7fa0e95e20b3 - __libc_start_main [INFO] [stderr] 29: 0x5575436f212e - _start [INFO] [stderr] 30: 0x0 - [INFO] running `Command { std: "docker" "inspect" "75c9073bdfd395e3b2fe6c9adfc2ebbc311d517d656f257da3acc2237408e04a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "75c9073bdfd395e3b2fe6c9adfc2ebbc311d517d656f257da3acc2237408e04a", kill_on_drop: false }` [INFO] [stdout] 75c9073bdfd395e3b2fe6c9adfc2ebbc311d517d656f257da3acc2237408e04a