[INFO] cloning repository https://github.com/Axect/Galmorph [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Axect/Galmorph" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 21de14073b013984b7f1daaaffb0d32e045eddb8 [INFO] checking Axect/Galmorph against try#b20a093d9fb1ffaa04ae9852cb034864a992bafd for pr-85073 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph" "/workspace/builds/worker-3/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Axect/Galmorph on toolchain b20a093d9fb1ffaa04ae9852cb034864a992bafd [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b20a093d9fb1ffaa04ae9852cb034864a992bafd" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Axect/Galmorph [INFO] finished tweaking git repo https://github.com/Axect/Galmorph [INFO] tweaked toml for git repo https://github.com/Axect/Galmorph written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate git repo https://github.com/Axect/Galmorph already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b20a093d9fb1ffaa04ae9852cb034864a992bafd" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded hdf5-sys v0.7.0 [INFO] [stderr] Downloaded libloading v0.6.4 [INFO] [stderr] Downloaded peroxide v0.27.0 [INFO] [stderr] Downloaded fitsio-sys v0.3.0 [INFO] [stderr] Downloaded netcdf v0.5.1 [INFO] [stderr] Downloaded netcdf-sys v0.3.2 [INFO] [stderr] Downloaded fitsio v0.16.0 [INFO] [stderr] Downloaded puruspe v0.1.4 [INFO] [stderr] Downloaded puruda-macro v0.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+b20a093d9fb1ffaa04ae9852cb034864a992bafd" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 57b8918c95cea27380cef41e17588c9029c8250ed083e8d34c5abc47b115c172 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "57b8918c95cea27380cef41e17588c9029c8250ed083e8d34c5abc47b115c172", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "57b8918c95cea27380cef41e17588c9029c8250ed083e8d34c5abc47b115c172", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "57b8918c95cea27380cef41e17588c9029c8250ed083e8d34c5abc47b115c172", kill_on_drop: false }` [INFO] [stdout] 57b8918c95cea27380cef41e17588c9029c8250ed083e8d34c5abc47b115c172 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+b20a093d9fb1ffaa04ae9852cb034864a992bafd" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3757a836e68a91f85eea5ac22b13a569008d3e8c2b9d10f5b76858d3ce3bf8c9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3757a836e68a91f85eea5ac22b13a569008d3e8c2b9d10f5b76858d3ce3bf8c9", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling regex-syntax v0.6.19 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling cc v1.0.61 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling netcdf-sys v0.3.2 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Compiling peroxide v0.27.0 [INFO] [stderr] Checking puruspe v0.1.4 [INFO] [stderr] Compiling puruda-macro v0.1.1 [INFO] [stderr] Compiling peroxide-ad v0.1.4 [INFO] [stderr] Checking json v0.12.4 [INFO] [stderr] Checking order-stat v0.1.3 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking lapack-sys v0.12.1 [INFO] [stderr] Checking blas-sys v0.7.1 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling libloading v0.6.4 [INFO] [stderr] Compiling fitsio-sys v0.3.0 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking fitsio v0.16.0 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking rand_distr v0.3.0 [INFO] [stderr] Checking lapack v0.16.0 [INFO] [stderr] Checking blas v0.20.0 [INFO] [stderr] Compiling regex v1.4.0 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Checking puruda v0.1.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-2811d319d1a93dcd/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55808a9d8a00 - std::backtrace_rs::backtrace::libunwind::trace::hdcf4f90f85129e83 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55808a9d8a00 - std::backtrace_rs::backtrace::trace_unsynchronized::h2669e30cb82f6732 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55808a9d8a00 - std::sys_common::backtrace::_print_fmt::hfbda19e17f6db318 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55808a9d8a00 - ::fmt::h1a8751bf59281272 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55808a9f753f - core::fmt::write::h7aa6cd0067dca82a [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/core/src/fmt/mod.rs:1094:17 [INFO] [stderr] 5: 0x55808a9d5e95 - std::io::Write::write_fmt::hd7dd3a1df9b6befb [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/io/mod.rs:1584:15 [INFO] [stderr] 6: 0x55808a9daa7b - std::sys_common::backtrace::_print::h551e9ec8a9fa8106 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55808a9daa7b - std::sys_common::backtrace::print::ha4b1c5e95fa040b3 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55808a9daa7b - std::panicking::default_hook::{{closure}}::h0b34c9ab7fb9f857 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55808a9da55d - std::panicking::default_hook::h3067e8318decd17a [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55808a9db02d - std::panicking::rust_panic_with_hook::h81b8facc50f34daa [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x55808a91f9e3 - std::panicking::begin_panic::{{closure}}::h504eb64b54831179 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x55808a92c7b9 - std::sys_common::backtrace::__rust_end_short_backtrace::h80f4f4c145c89efe [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55808a91f919 - std::panicking::begin_panic::hec842155bd00f4d4 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x55808a7cedc9 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h3196d4aa5a5794f8 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x55808a7d05dc - build_script_build::main::heee320ed9e22193f [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x55808a7d40ab - core::ops::function::FnOnce::call_once::h21629ae22416e63b [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55808a7db18e - std::sys_common::backtrace::__rust_begin_short_backtrace::hed421c49ab7e6970 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55808a7d9041 - std::rt::lang_start::{{closure}}::h82ff1535feaeef2a [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/rt.rs:49:18 [INFO] [stderr] 19: 0x55808a9db42a - core::ops::function::impls:: for &F>::call_once::h3b8c329143d7638a [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55808a9db42a - std::panicking::try::do_call::h4b72c261b4eefc1b [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x55808a9db42a - std::panicking::try::h703d31b7896cbd49 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x55808a9db42a - std::panic::catch_unwind::h37cad9b35388a915 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/panic.rs:431:14 [INFO] [stderr] 23: 0x55808a9db42a - std::rt::lang_start_internal::hab5a8a909af4f90e [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/rt.rs:34:21 [INFO] [stderr] 24: 0x55808a7d9020 - std::rt::lang_start::h5bf3868cc642bca7 [INFO] [stderr] at /rustc/b20a093d9fb1ffaa04ae9852cb034864a992bafd/library/std/src/rt.rs:48:5 [INFO] [stderr] 25: 0x55808a7d1adc - main [INFO] [stderr] 26: 0x7fd4027530b3 - __libc_start_main [INFO] [stderr] 27: 0x55808a7c9e4e - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "3757a836e68a91f85eea5ac22b13a569008d3e8c2b9d10f5b76858d3ce3bf8c9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3757a836e68a91f85eea5ac22b13a569008d3e8c2b9d10f5b76858d3ce3bf8c9", kill_on_drop: false }` [INFO] [stdout] 3757a836e68a91f85eea5ac22b13a569008d3e8c2b9d10f5b76858d3ce3bf8c9