[INFO] cloning repository https://github.com/38/pyd4 [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 15f07e7e103cd4bd5474c7098c2c3d7a72ede2bd [INFO] checking 38/pyd4 against try#b0d0ea232bdae12fa8da8491a91ae1db029990ef for pr-84037 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-8/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-8/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain b0d0ea232bdae12fa8da8491a91ae1db029990ef [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b0d0ea232bdae12fa8da8491a91ae1db029990ef" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/38/pyd4 [INFO] finished tweaking git repo https://github.com/38/pyd4 [INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-8/source/Cargo.toml [INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b0d0ea232bdae12fa8da8491a91ae1db029990ef" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded unindent v0.1.6 [INFO] [stderr] Downloaded indoc-impl v0.3.6 [INFO] [stderr] Downloaded indoc v0.3.6 [INFO] [stderr] Downloaded pyo3-derive-backend v0.12.1 [INFO] [stderr] Downloaded pyo3 v0.12.1 [INFO] [stderr] Downloaded pyo3cls v0.12.1 [INFO] [stderr] Downloaded d4-framefile v0.1.13 [INFO] [stderr] Downloaded d4 v0.1.13 [INFO] [stderr] Downloaded d4-hts v0.1.13 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+b0d0ea232bdae12fa8da8491a91ae1db029990ef" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 96dc0aa197e2e87422e4999926da7a32cc1ff7ac26d056ff9407329dc0acb93a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "96dc0aa197e2e87422e4999926da7a32cc1ff7ac26d056ff9407329dc0acb93a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "96dc0aa197e2e87422e4999926da7a32cc1ff7ac26d056ff9407329dc0acb93a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "96dc0aa197e2e87422e4999926da7a32cc1ff7ac26d056ff9407329dc0acb93a", kill_on_drop: false }` [INFO] [stdout] 96dc0aa197e2e87422e4999926da7a32cc1ff7ac26d056ff9407329dc0acb93a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+b0d0ea232bdae12fa8da8491a91ae1db029990ef" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 50ebea33c969ec47e99de8804e69d361ab0dcf9839ecc60aa089912e3961ae22 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "50ebea33c969ec47e99de8804e69d361ab0dcf9839ecc60aa089912e3961ae22", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling unindent v0.1.6 [INFO] [stderr] Compiling inventory v0.1.9 [INFO] [stderr] Compiling pyo3 v0.12.1 [INFO] [stderr] Checking instant v0.1.7 [INFO] [stderr] Checking lock_api v0.4.1 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Checking getrandom v0.1.15 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Checking parking_lot_core v0.8.0 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling miniz_oxide v0.4.2 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Checking parking_lot v0.11.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Checking serde_json v1.0.57 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling clang-sys v1.0.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Checking flate2 v1.0.17 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking rayon-core v1.8.1 [INFO] [stderr] Checking d4-framefile v0.1.13 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling pyo3-derive-backend v0.12.1 [INFO] [stderr] Compiling ctor v0.1.15 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling ghost v0.1.2 [INFO] [stderr] Compiling inventory-impl v0.1.9 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling pyo3cls v0.12.1 [INFO] [stderr] Checking indoc v0.3.6 [INFO] [stderr] Compiling d4-hts v0.1.13 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.1.13` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-9d0d04fbac85abd4/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-fbbd2b2b8b58ac1e/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-fbbd2b2b8b58ac1e/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:34:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55a036c0ec30 - std::backtrace_rs::backtrace::libunwind::trace::h247d9dc800afe0ad [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55a036c0ec30 - std::backtrace_rs::backtrace::trace_unsynchronized::h9a4153306adf486c [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55a036c0ec30 - std::sys_common::backtrace::_print_fmt::h1ac8daa5000ee24c [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55a036c0ec30 - ::fmt::h22a8e55d2cc5363a [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55a036c33f4f - core::fmt::write::h7aa6cd0067dca82a [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/core/src/fmt/mod.rs:1094:17 [INFO] [stderr] 5: 0x55a036c0b945 - std::io::Write::write_fmt::h441a47830651073b [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/io/mod.rs:1580:15 [INFO] [stderr] 6: 0x55a036c10ffb - std::sys_common::backtrace::_print::hd1e0ee1c195f9f05 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55a036c10ffb - std::sys_common::backtrace::print::h7d1098def5c25d20 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55a036c10ffb - std::panicking::default_hook::{{closure}}::h484b8b15967e42c8 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55a036c10add - std::panicking::default_hook::h82c79ca49716b79d [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55a036c115ad - std::panicking::rust_panic_with_hook::h6df253a3c973d6b6 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x55a036c11177 - std::panicking::begin_panic_handler::{{closure}}::hc6a4120674935ea3 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x55a036c0f0ec - std::sys_common::backtrace::__rust_end_short_backtrace::h9b5f057c8351b0b1 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55a036c11109 - rust_begin_unwind [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x55a0366c5711 - core::panicking::panic_fmt::hbe99dddd3092ba3c [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55a0366c565d - core::panicking::panic::h3de4db67bd397eb3 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55a0366c8872 - build_script_build::build_own_htslib::h49586877aa84f78a [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:34:5 [INFO] [stderr] 17: 0x55a0366c8d8e - build_script_build::main::h3555b46ab2863cf4 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:66:9 [INFO] [stderr] 18: 0x55a0366c7cfb - core::ops::function::FnOnce::call_once::h48d5290bb3383ed2 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55a0366c6cee - std::sys_common::backtrace::__rust_begin_short_backtrace::h4e90c2841ca2479b [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55a0366c7bd1 - std::rt::lang_start::{{closure}}::hadd02892ab1ae26c [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/rt.rs:66:18 [INFO] [stderr] 21: 0x55a036c11aaa - core::ops::function::impls:: for &F>::call_once::h98fbc5823393ca6f [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55a036c11aaa - std::panicking::try::do_call::h210d0709dd1d5fd6 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:379:40 [INFO] [stderr] 23: 0x55a036c11aaa - std::panicking::try::hc60c2c01c5cf7473 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panicking.rs:343:19 [INFO] [stderr] 24: 0x55a036c11aaa - std::panic::catch_unwind::h7480a56877b30ca9 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/panic.rs:431:14 [INFO] [stderr] 25: 0x55a036c11aaa - std::rt::lang_start_internal::he77194431b0ee4a2 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/rt.rs:51:25 [INFO] [stderr] 26: 0x55a0366c7bb0 - std::rt::lang_start::hecfcbff1b1333548 [INFO] [stderr] at /rustc/b0d0ea232bdae12fa8da8491a91ae1db029990ef/library/std/src/rt.rs:65:5 [INFO] [stderr] 27: 0x55a0366c93bc - main [INFO] [stderr] 28: 0x7f9f593ed0b3 - __libc_start_main [INFO] [stderr] 29: 0x55a0366c5eae - _start [INFO] [stderr] 30: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "50ebea33c969ec47e99de8804e69d361ab0dcf9839ecc60aa089912e3961ae22", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "50ebea33c969ec47e99de8804e69d361ab0dcf9839ecc60aa089912e3961ae22", kill_on_drop: false }` [INFO] [stdout] 50ebea33c969ec47e99de8804e69d361ab0dcf9839ecc60aa089912e3961ae22