[INFO] fetching crate neuro 0.1.0... [INFO] checking neuro-0.1.0 against try#45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4 for pr-83744 [INFO] extracting crate neuro 0.1.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate neuro 0.1.0 on toolchain 45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate neuro 0.1.0 [INFO] finished tweaking crates.io crate neuro 0.1.0 [INFO] tweaked toml for crates.io crate neuro 0.1.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate crates.io crate neuro 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded number_prefix v0.3.0 [INFO] [stderr] Downloaded indicatif v0.14.0 [INFO] [stderr] Downloaded ndarray v0.12.1 [INFO] [stderr] Downloaded arrayfire v3.6.3 [INFO] [stderr] Downloaded aho-corasick v0.7.9 [INFO] [stderr] Downloaded termios v0.3.1 [INFO] [stderr] Downloaded lock_api v0.2.0 [INFO] [stderr] Downloaded hdf5 v0.6.0 [INFO] [stderr] Downloaded clicolors-control v1.0.1 [INFO] [stderr] Downloaded jpeg-decoder v0.1.18 [INFO] [stderr] Downloaded png v0.15.3 [INFO] [stderr] Downloaded parking_lot v0.8.0 [INFO] [stderr] Downloaded console v0.9.2 [INFO] [stderr] Downloaded regex-automata v0.1.8 [INFO] [stderr] Downloaded hdf5-derive v0.6.0 [INFO] [stderr] Downloaded hdf5-types v0.6.0 [INFO] [stderr] Downloaded parking_lot_core v0.5.0 [INFO] [stderr] Downloaded num-rational v0.2.3 [INFO] [stderr] Downloaded bstr v0.2.11 [INFO] [stderr] Downloaded hdf5-sys v0.6.0 [INFO] [stderr] Downloaded image v0.23.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5c429391f5dc6fada225c41ad6a130b91aef97cca4f7d768abaa6a125a8ef630 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5c429391f5dc6fada225c41ad6a130b91aef97cca4f7d768abaa6a125a8ef630", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5c429391f5dc6fada225c41ad6a130b91aef97cca4f7d768abaa6a125a8ef630", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5c429391f5dc6fada225c41ad6a130b91aef97cca4f7d768abaa6a125a8ef630", kill_on_drop: false }` [INFO] [stdout] 5c429391f5dc6fada225c41ad6a130b91aef97cca4f7d768abaa6a125a8ef630 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 47ca02dcd916040dd491376c1551c99a66dd7f6a29d5a8442af26d43bca8d57f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "47ca02dcd916040dd491376c1551c99a66dd7f6a29d5a8442af26d43bca8d57f", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling libc v0.2.67 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Compiling cc v1.0.50 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling serde v1.0.104 [INFO] [stderr] Compiling proc-macro2 v1.0.9 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling regex-syntax v0.6.14 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Compiling syn v1.0.16 [INFO] [stderr] Checking adler32 v1.0.4 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling itoa v0.4.5 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking ppv-lite86 v0.2.6 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking lzw v0.10.0 [INFO] [stderr] Checking unicode-width v0.1.7 [INFO] [stderr] Checking color_quant v1.0.1 [INFO] [stderr] Checking ascii v0.9.3 [INFO] [stderr] Checking bytemuck v1.2.0 [INFO] [stderr] Checking scoped_threadpool v0.1.9 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Checking lock_api v0.2.0 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking miniz_oxide v0.3.6 [INFO] [stderr] Checking inflate v0.4.5 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Checking rand_jitter v0.1.4 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Checking walkdir v2.3.1 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Checking gif v0.10.3 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.3 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Checking rand_xorshift v0.1.1 [INFO] [stderr] Checking rand_isaac v0.1.1 [INFO] [stderr] Checking rand_hc v0.1.0 [INFO] [stderr] Checking c2-chacha v0.2.3 [INFO] [stderr] Compiling memoffset v0.5.3 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Checking aho-corasick v0.7.9 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking smallvec v0.6.13 [INFO] [stderr] Checking deflate v0.7.20 [INFO] [stderr] Checking regex-automata v0.1.8 [INFO] [stderr] Checking tiff v0.4.0 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking num_cpus v1.12.0 [INFO] [stderr] Checking getrandom v0.1.14 [INFO] [stderr] Checking termios v0.3.1 [INFO] [stderr] Checking clicolors-control v1.0.1 [INFO] [stderr] Checking hdf5-types v0.6.0 [INFO] [stderr] Checking png v0.15.3 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Compiling regex v1.3.4 [INFO] [stderr] Checking rand_chacha v0.2.1 [INFO] [stderr] Checking crossbeam-queue v0.2.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking rayon v1.3.0 [INFO] [stderr] Checking console v0.9.2 [INFO] [stderr] Checking indicatif v0.14.0 [INFO] [stderr] Checking num v0.2.1 [INFO] [stderr] Compiling hdf5-sys v0.6.0 [INFO] [stderr] Checking bstr v0.2.11 [INFO] [stderr] Compiling serde_json v1.0.48 [INFO] [stderr] Checking jpeg-decoder v0.1.18 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-7d1fac570a636918/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55be846742e0 - std::backtrace_rs::backtrace::libunwind::trace::hec7eaac9435d3512 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55be846742e0 - std::backtrace_rs::backtrace::trace_unsynchronized::h42791b8fa12b7daa [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55be846742e0 - std::sys_common::backtrace::_print_fmt::h3da3ebe04fb665a8 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55be846742e0 - ::fmt::he40bcdde3c4491cd [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55be84692c4f - core::fmt::write::h2c729149c08098ab [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/core/src/fmt/mod.rs:1094:17 [INFO] [stderr] 5: 0x55be84671895 - std::io::Write::write_fmt::h28e0f2f58b8d7b7e [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/io/mod.rs:1578:15 [INFO] [stderr] 6: 0x55be8467625b - std::sys_common::backtrace::_print::h7f0223b1e3d898fc [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55be8467625b - std::sys_common::backtrace::print::h58edd634a14c2d4c [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55be8467625b - std::panicking::default_hook::{{closure}}::h71657a7591430164 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55be84675d3d - std::panicking::default_hook::hcdf4eb5db072c85b [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55be8467680d - std::panicking::rust_panic_with_hook::hfb91e961ffb5b8e0 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x55be845bf733 - std::panicking::begin_panic::{{closure}}::h364a1b6ed8c71070 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x55be845dd089 - std::sys_common::backtrace::__rust_end_short_backtrace::h8172b3fe7e059203 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55be845bf669 - std::panicking::begin_panic::hf9933015cbd560d9 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x55be84472fc9 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h44fbf57bd50eaf2a [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] 15: 0x55be8447429b - build_script_build::main::hf3a386f66e9a1c1d [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:605:5 [INFO] [stderr] 16: 0x55be8447888b - core::ops::function::FnOnce::call_once::hf51d1c386d2d2b28 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55be84475d3e - std::sys_common::backtrace::__rust_begin_short_backtrace::h479fded07b3e51ce [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55be8447b181 - std::rt::lang_start::{{closure}}::h25962c65a1509e48 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x55be84676c0a - core::ops::function::impls:: for &F>::call_once::hd5953dadf0bc8f54 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55be84676c0a - std::panicking::try::do_call::h23b369f1996fb7d4 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x55be84676c0a - std::panicking::try::he017ee9ed6bce192 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x55be84676c0a - std::panic::catch_unwind::hbfb892340a78b30d [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/panic.rs:431:14 [INFO] [stderr] 23: 0x55be84676c0a - std::rt::lang_start_internal::hce6e4c0ce56abb51 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x55be8447b160 - std::rt::lang_start::h6e11127bccd4ace6 [INFO] [stderr] at /rustc/45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x55be84474c8c - main [INFO] [stderr] 26: 0x7f536ca6c0b3 - __libc_start_main [INFO] [stderr] 27: 0x55be8446ec9e - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "47ca02dcd916040dd491376c1551c99a66dd7f6a29d5a8442af26d43bca8d57f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "47ca02dcd916040dd491376c1551c99a66dd7f6a29d5a8442af26d43bca8d57f", kill_on_drop: false }` [INFO] [stdout] 47ca02dcd916040dd491376c1551c99a66dd7f6a29d5a8442af26d43bca8d57f