[INFO] fetching crate gb-io 0.6.0... [INFO] checking gb-io-0.6.0 against try#45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4 for pr-83744 [INFO] extracting crate gb-io 0.6.0 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate gb-io 0.6.0 on toolchain 45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gb-io 0.6.0 [INFO] finished tweaking crates.io crate gb-io 0.6.0 [INFO] tweaked toml for crates.io crate gb-io 0.6.0 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate crates.io crate gb-io 0.6.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded snafu-derive v0.5.0 [INFO] [stderr] Downloaded strum v0.16.0 [INFO] [stderr] Downloaded err-derive v0.2.3 [INFO] [stderr] Downloaded snafu v0.5.0 [INFO] [stderr] Downloaded strum_macros v0.16.0 [INFO] [stderr] Downloaded ndarray v0.13.0 [INFO] [stderr] Downloaded bv v0.11.0 [INFO] [stderr] Downloaded backtrace v0.3.45 [INFO] [stderr] Downloaded backtrace-sys v0.1.33 [INFO] [stderr] Downloaded bio v0.30.0 [INFO] [stderr] Downloaded serde_bytes v0.11.3 [INFO] [stderr] Downloaded bytecount v0.6.0 [INFO] [stderr] Downloaded doc-comment v0.3.2 [INFO] [stderr] Downloaded circular v0.3.0 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded statrs v0.11.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7be2f2b02835c155fa815cc1d4fd4c31b95e8e622eddf6fff89b5a1d0229dd77 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7be2f2b02835c155fa815cc1d4fd4c31b95e8e622eddf6fff89b5a1d0229dd77", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7be2f2b02835c155fa815cc1d4fd4c31b95e8e622eddf6fff89b5a1d0229dd77", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7be2f2b02835c155fa815cc1d4fd4c31b95e8e622eddf6fff89b5a1d0229dd77", kill_on_drop: false }` [INFO] [stdout] 7be2f2b02835c155fa815cc1d4fd4c31b95e8e622eddf6fff89b5a1d0229dd77 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+45d8b6e68beee1c9c1ce92ae258a7e02f8f13aa4" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] fc8f6e238f4185d3371f94599a453962f1d579820703f9f6fdde0fa0929d8190 [INFO] running `Command { std: "docker" "start" "-a" "fc8f6e238f4185d3371f94599a453962f1d579820703f9f6fdde0fa0929d8190", kill_on_drop: false }` [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling syn v1.0.16 [INFO] [stderr] Compiling libc v0.2.67 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling version_check v0.9.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.6 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling siphasher v0.3.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling doc-comment v0.3.2 [INFO] [stderr] Checking regex-syntax v0.6.16 [INFO] [stderr] Checking rustc-demangle v0.1.16 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Checking ordermap v0.3.5 [INFO] [stderr] Checking fixedbitset v0.1.9 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Compiling bio v0.30.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking new_debug_unreachable v1.0.4 [INFO] [stderr] Checking bytecount v0.6.0 [INFO] [stderr] Checking precomputed-hash v0.1.1 [INFO] [stderr] Checking strum v0.16.0 [INFO] [stderr] Checking circular v0.3.0 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling backtrace-sys v0.1.33 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Compiling bv v0.11.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling proc-macro2 v1.0.9 [INFO] [stderr] Compiling c2-chacha v0.2.3 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Checking petgraph v0.4.13 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling proc-macro-error-attr v0.4.11 [INFO] [stderr] Compiling proc-macro-error v0.4.11 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Checking rand v0.6.5 [INFO] [stderr] Checking backtrace v0.3.45 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Checking regex v1.3.4 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking statrs v0.11.0 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling string_cache_codegen v0.5.1 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Compiling gb-io v0.6.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling syn-mid v0.5.0 [INFO] [stderr] Compiling synstructure v0.12.3 [INFO] [stderr] Checking snafu v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] Compiling rustversion v1.0.2 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Compiling err-derive v0.2.3 [INFO] [stderr] Checking serde v1.0.104 [INFO] [stderr] Checking bstr v0.2.11 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking multimap v0.6.0 [INFO] [stderr] Checking serde_bytes v0.11.3 [INFO] [stderr] Checking string_cache v0.8.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stdout] error: couldn't read src/../tests/mg1655.gb: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:72:21 [INFO] [stdout] | [INFO] [stdout] 72 | let ecoli = include_bytes!("../tests/mg1655.gb"); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this error originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read src/../tests/circ.gb: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:88:32 [INFO] [stdout] | [INFO] [stdout] 88 | let circ = parse_slice(include_bytes!("../tests/circ.gb")).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this error originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read src/../tests/circ.gb: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:95:32 [INFO] [stdout] | [INFO] [stdout] 95 | let circ = parse_slice(include_bytes!("../tests/circ.gb")).unwrap().pop().unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this error originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read src/../tests/biopython_tests/ls_orchid.gb: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:114:25 [INFO] [stdout] | [INFO] [stdout] 114 | parse_slice(include_bytes!("../tests/biopython_tests/ls_orchid.gb")).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this error originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/reader/nom_parsers.rs:212:15 [INFO] [stdout] | [INFO] [stdout] 212 | lines.intersperse(b"\n") [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `itertools::Itertools::intersperse(...)` to keep using the current method [INFO] [stdout] = help: add `#![feature(iter_intersperse)]` to the crate attributes to enable `std::iter::Iterator::intersperse` [INFO] [stdout] = help: add `#![feature(iter_intersperse)]` to the crate attributes to enable `std::iter::Iterator::intersperse` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: an associated function with this name may be added to the standard library in the future [INFO] [stdout] --> src/reader/nom_parsers.rs:212:15 [INFO] [stdout] | [INFO] [stdout] 212 | lines.intersperse(b"\n") [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unstable_name_collisions)]` on by default [INFO] [stdout] = warning: once this associated item is added to the standard library, the ambiguity may cause an error or change in behavior! [INFO] [stdout] = note: for more information, see issue #48919 [INFO] [stdout] = help: call with fully qualified syntax `itertools::Itertools::intersperse(...)` to keep using the current method [INFO] [stdout] = help: add `#![feature(iter_intersperse)]` to the crate attributes to enable `std::iter::Iterator::intersperse` [INFO] [stdout] = help: add `#![feature(iter_intersperse)]` to the crate attributes to enable `std::iter::Iterator::intersperse` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 4 previous errors; 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `gb-io` [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "fc8f6e238f4185d3371f94599a453962f1d579820703f9f6fdde0fa0929d8190", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fc8f6e238f4185d3371f94599a453962f1d579820703f9f6fdde0fa0929d8190", kill_on_drop: false }` [INFO] [stdout] fc8f6e238f4185d3371f94599a453962f1d579820703f9f6fdde0fa0929d8190