[INFO] cloning repository https://github.com/ctiede/tracers-toy-model [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ctiede/tracers-toy-model" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fctiede%2Ftracers-toy-model", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fctiede%2Ftracers-toy-model'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 430e37c19164f90bd1f64fe7c391d395c90aabaf [INFO] checking ctiede/tracers-toy-model against master#f82664191d0e8764b7435b9d72eb0e366b8b1464 for pr-83354 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fctiede%2Ftracers-toy-model" "/workspace/builds/worker-10/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-10/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ctiede/tracers-toy-model on toolchain f82664191d0e8764b7435b9d72eb0e366b8b1464 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+f82664191d0e8764b7435b9d72eb0e366b8b1464" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ctiede/tracers-toy-model [INFO] finished tweaking git repo https://github.com/ctiede/tracers-toy-model [INFO] tweaked toml for git repo https://github.com/ctiede/tracers-toy-model written to /workspace/builds/worker-10/source/Cargo.toml [INFO] crate git repo https://github.com/ctiede/tracers-toy-model already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+f82664191d0e8764b7435b9d72eb0e366b8b1464" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:4f92631de1aa59f8320307485d3b3c869a5c90ab1d76ce2cffab9807b8c9a1fb" "/opt/rustwide/cargo-home/bin/cargo" "+f82664191d0e8764b7435b9d72eb0e366b8b1464" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b1b002fd254cde84e8edb9ae0316177c7668f07123981baaa587dcbe023a91fd [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b1b002fd254cde84e8edb9ae0316177c7668f07123981baaa587dcbe023a91fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b1b002fd254cde84e8edb9ae0316177c7668f07123981baaa587dcbe023a91fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b1b002fd254cde84e8edb9ae0316177c7668f07123981baaa587dcbe023a91fd", kill_on_drop: false }` [INFO] [stdout] b1b002fd254cde84e8edb9ae0316177c7668f07123981baaa587dcbe023a91fd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:4f92631de1aa59f8320307485d3b3c869a5c90ab1d76ce2cffab9807b8c9a1fb" "/opt/rustwide/cargo-home/bin/cargo" "+f82664191d0e8764b7435b9d72eb0e366b8b1464" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 17798eefdc2621c83f51f9ff9ec7ceba5f6e3c3aa4fc904dcc15c59130ff9ece [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "17798eefdc2621c83f51f9ff9ec7ceba5f6e3c3aa4fc904dcc15c59130ff9ece", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling syn v1.0.40 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Compiling hdf5 v0.7.0 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-bigint v0.3.0 [INFO] [stderr] Compiling num-rational v0.3.0 [INFO] [stderr] Compiling num-iter v0.1.41 [INFO] [stderr] Checking lock_api v0.3.4 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking getrandom v0.1.15 [INFO] [stderr] Checking parking_lot_core v0.7.2 [INFO] [stderr] Checking hdf5-types v0.7.0 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking parking_lot v0.10.2 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking num-complex v0.3.0 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Checking num v0.3.0 [INFO] [stderr] Checking ndarray-ops v0.1.0 (/opt/rustwide/workdir/ndarray-ops) [INFO] [stderr] Compiling hdf5-derive v0.7.0 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-4f9a51895378d183/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55d15ee42a40 - std::backtrace_rs::backtrace::libunwind::trace::h4dee703919bfd40a [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55d15ee42a40 - std::backtrace_rs::backtrace::trace_unsynchronized::h457e839f1a563e20 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55d15ee42a40 - std::sys_common::backtrace::_print_fmt::h86a55fb30f8393c8 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55d15ee42a40 - ::fmt::h7b3d6cac46d277e1 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55d15ee5db6f - core::fmt::write::h127419eb46f2ecc9 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/core/src/fmt/mod.rs:1092:17 [INFO] [stderr] 5: 0x55d15ee3fdb2 - std::io::Write::write_fmt::h6010cfbb4726588b [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/io/mod.rs:1572:15 [INFO] [stderr] 6: 0x55d15ee44a05 - std::sys_common::backtrace::_print::h79b4f9652330cc9d [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55d15ee44a05 - std::sys_common::backtrace::print::h330bb326a76af8cf [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55d15ee44a05 - std::panicking::default_hook::{{closure}}::heb6a42a7d50a472e [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55d15ee444b3 - std::panicking::default_hook::h17e521ba6d68d6e1 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55d15ee4500d - std::panicking::rust_panic_with_hook::h70db735e3a6e70cb [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x55d15ed79e13 - std::panicking::begin_panic::{{closure}}::hcf0144f49cc7775d [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x55d15eda1929 - std::sys_common::backtrace::__rust_end_short_backtrace::hd501019ccf32a81a [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55d15ed79d49 - std::panicking::begin_panic::h97ef8696c427c0c7 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x55d15ec32f69 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h0b464e340e6d1e96 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x55d15ec34761 - build_script_build::main::h8163288a70172530 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x55d15ec38eeb - core::ops::function::FnOnce::call_once::h16413dd038476034 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55d15ec3f85e - std::sys_common::backtrace::__rust_begin_short_backtrace::h7f56ab8b223b75f1 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55d15ec3ef21 - std::rt::lang_start::{{closure}}::hbadb2afd6c46e0de [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x55d15ee4540a - core::ops::function::impls:: for &F>::call_once::hbcc915e668c7ca11 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55d15ee4540a - std::panicking::try::do_call::h6b0f430d48122ddf [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x55d15ee4540a - std::panicking::try::h6ba420e2e21b5afa [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x55d15ee4540a - std::panic::catch_unwind::h8366719d1f615eee [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/panic.rs:431:14 [INFO] [stderr] 23: 0x55d15ee4540a - std::rt::lang_start_internal::h965c28c9ce06ee73 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x55d15ec3ef00 - std::rt::lang_start::h6612e1a8ae816735 [INFO] [stderr] at /rustc/f82664191d0e8764b7435b9d72eb0e366b8b1464/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x55d15ec35c5c - main [INFO] [stderr] 26: 0x7ff54c72f0b3 - __libc_start_main [INFO] [stderr] 27: 0x55d15ec2deae - _start [INFO] [stderr] 28: 0x0 - [INFO] running `Command { std: "docker" "inspect" "17798eefdc2621c83f51f9ff9ec7ceba5f6e3c3aa4fc904dcc15c59130ff9ece", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "17798eefdc2621c83f51f9ff9ec7ceba5f6e3c3aa4fc904dcc15c59130ff9ece", kill_on_drop: false }` [INFO] [stdout] 17798eefdc2621c83f51f9ff9ec7ceba5f6e3c3aa4fc904dcc15c59130ff9ece