[INFO] cloning repository https://github.com/wheaton5/het_snp_kmers [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/wheaton5/het_snp_kmers" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 81bddfa5537686072c13ab3780d45ca0c99b9b0a [INFO] checking wheaton5/het_snp_kmers against try#b09a3e9a7a0ff7efb269ec0c13dcc0fd3cedcf6b for pr-82781 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Fhet_snp_kmers" "/workspace/builds/worker-4/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/wheaton5/het_snp_kmers on toolchain b09a3e9a7a0ff7efb269ec0c13dcc0fd3cedcf6b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b09a3e9a7a0ff7efb269ec0c13dcc0fd3cedcf6b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/wheaton5/het_snp_kmers [INFO] finished tweaking git repo https://github.com/wheaton5/het_snp_kmers [INFO] tweaked toml for git repo https://github.com/wheaton5/het_snp_kmers written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/wheaton5/het_snp_kmers already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b09a3e9a7a0ff7efb269ec0c13dcc0fd3cedcf6b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:4f92631de1aa59f8320307485d3b3c869a5c90ab1d76ce2cffab9807b8c9a1fb" "/opt/rustwide/cargo-home/bin/cargo" "+b09a3e9a7a0ff7efb269ec0c13dcc0fd3cedcf6b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] adad8465989a30a2dce4d590757d54991516ffc5ba1e12d846af2c09738f91fb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "adad8465989a30a2dce4d590757d54991516ffc5ba1e12d846af2c09738f91fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "adad8465989a30a2dce4d590757d54991516ffc5ba1e12d846af2c09738f91fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "adad8465989a30a2dce4d590757d54991516ffc5ba1e12d846af2c09738f91fb", kill_on_drop: false }` [INFO] [stdout] adad8465989a30a2dce4d590757d54991516ffc5ba1e12d846af2c09738f91fb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:4f92631de1aa59f8320307485d3b3c869a5c90ab1d76ce2cffab9807b8c9a1fb" "/opt/rustwide/cargo-home/bin/cargo" "+b09a3e9a7a0ff7efb269ec0c13dcc0fd3cedcf6b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6a82deb6c4b7a0d12968d5001daade264cb58805c42802fcaeea1b1253f344a4 [INFO] running `Command { std: "docker" "start" "-a" "6a82deb6c4b7a0d12968d5001daade264cb58805c42802fcaeea1b1253f344a4", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.62 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling syn v1.0.64 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling getrandom v0.1.12 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking rand_core v0.6.2 [INFO] [stderr] Checking ppv-lite86 v0.2.5 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking unicode-width v0.1.5 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking yaml-rust v0.3.5 [INFO] [stderr] Checking bitflags v0.9.1 [INFO] [stderr] Checking ansi_term v0.9.0 [INFO] [stderr] Checking byteorder v1.2.7 [INFO] [stderr] Checking strsim v0.6.0 [INFO] [stderr] Checking scopeguard v0.3.3 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Checking textwrap v0.9.0 [INFO] [stderr] Checking wyhash v0.5.0 [INFO] [stderr] Checking itertools v0.10.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Checking hashbrown v0.1.8 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Checking c2-chacha v0.2.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.2 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Checking clap v2.27.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.3 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking rand v0.7.2 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking num v0.3.1 [INFO] [stderr] Compiling serde_derive v1.0.124 [INFO] [stderr] Checking serde v1.0.124 [INFO] [stderr] Checking boomphf v0.5.9 [INFO] [stderr] Checking serde_json v1.0.64 [INFO] [stderr] Checking debruijn v0.3.2 (https://github.com/10XGenomics/rust-debruijn.git#f6e9188a) [INFO] [stderr] Checking het_snp_kmers v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `debruijn::kmer::*` [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use debruijn::kmer::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Write` [INFO] [stdout] --> src/main.rs:17:5 [INFO] [stdout] | [INFO] [stdout] 17 | use std::io::Write; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::error::Error` [INFO] [stdout] --> src/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::error::Error; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::cmp::min` [INFO] [stdout] --> src/main.rs:29:5 [INFO] [stdout] | [INFO] [stdout] 29 | use std::cmp::min; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn::kmer::*` [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use debruijn::kmer::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Write` [INFO] [stdout] --> src/main.rs:17:5 [INFO] [stdout] | [INFO] [stdout] 17 | use std::io::Write; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::error::Error` [INFO] [stdout] --> src/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::error::Error; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::cmp::min` [INFO] [stdout] --> src/main.rs:29:5 [INFO] [stdout] | [INFO] [stdout] 29 | use std::cmp::min; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn` [INFO] [stdout] --> src/main.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use debruijn::*; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmers` [INFO] [stdout] --> src/main.rs:33:10 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmer_pairs` [INFO] [stdout] --> src/main.rs:33:21 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `kmer_u64` [INFO] [stdout] --> src/main.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `debruijn` [INFO] [stdout] --> src/main.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use debruijn::*; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmers` [INFO] [stdout] --> src/main.rs:33:10 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmers` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `het_kmer_pairs` [INFO] [stdout] --> src/main.rs:33:21 [INFO] [stdout] | [INFO] [stdout] 33 | let (het_kmers, het_kmer_pairs) = load_kmers(¶ms); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_het_kmer_pairs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `kmer_u64` [INFO] [stdout] --> src/main.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | let kmer_u64 = twobit(&kmer); [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_kmer_u64` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 50.45s [INFO] running `Command { std: "docker" "inspect" "6a82deb6c4b7a0d12968d5001daade264cb58805c42802fcaeea1b1253f344a4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6a82deb6c4b7a0d12968d5001daade264cb58805c42802fcaeea1b1253f344a4", kill_on_drop: false }` [INFO] [stdout] 6a82deb6c4b7a0d12968d5001daade264cb58805c42802fcaeea1b1253f344a4