[INFO] fetching crate gchemol 0.0.41... [INFO] checking gchemol-0.0.41 against master#195ad4830e11a544391abe296b146450dea8411b for pr-82781 [INFO] extracting crate gchemol 0.0.41 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate gchemol 0.0.41 on toolchain 195ad4830e11a544391abe296b146450dea8411b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+195ad4830e11a544391abe296b146450dea8411b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gchemol 0.0.41 [INFO] finished tweaking crates.io crate gchemol 0.0.41 [INFO] tweaked toml for crates.io crate gchemol 0.0.41 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+195ad4830e11a544391abe296b146450dea8411b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+195ad4830e11a544391abe296b146450dea8411b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded gchemol-geometry v0.0.39 [INFO] [stderr] Downloaded gchemol-readwrite v0.0.41 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+195ad4830e11a544391abe296b146450dea8411b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 84483c145660d8cab220696ac11d419aaa016af27a09b0f214847a9b6d840794 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "84483c145660d8cab220696ac11d419aaa016af27a09b0f214847a9b6d840794", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "84483c145660d8cab220696ac11d419aaa016af27a09b0f214847a9b6d840794", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "84483c145660d8cab220696ac11d419aaa016af27a09b0f214847a9b6d840794", kill_on_drop: false }` [INFO] [stdout] 84483c145660d8cab220696ac11d419aaa016af27a09b0f214847a9b6d840794 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+195ad4830e11a544391abe296b146450dea8411b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 79278bb278f3b7bada47b942a1d593ede8c7903feec8cec77cfec92e316648d3 [INFO] running `Command { std: "docker" "start" "-a" "79278bb278f3b7bada47b942a1d593ede8c7903feec8cec77cfec92e316648d3", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling serde_derive v1.0.124 [INFO] [stderr] Compiling serde v1.0.124 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Compiling anyhow v1.0.38 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking humantime v2.1.0 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Compiling regex-syntax v0.6.23 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Checking hashbrown v0.9.1 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Checking thread_local v1.1.3 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking matrixmultiply v0.2.4 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Checking walkdir v2.3.1 [INFO] [stderr] Checking unic-ucd-segment v0.9.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking shared_child v0.3.5 [INFO] [stderr] Checking os_pipe v0.9.2 [INFO] [stderr] Checking getrandom v0.2.2 [INFO] [stderr] Checking time v0.1.43 [INFO] [stderr] Checking lexical-core v0.7.5 [INFO] [stderr] Checking generic-array v0.13.3 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling indexmap v1.6.2 [INFO] [stderr] Checking duct v0.13.5 [INFO] [stderr] Checking rand_core v0.6.2 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Checking bstr v0.2.15 [INFO] [stderr] Checking unic-segment v0.9.0 [INFO] [stderr] Checking rand_chacha v0.3.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking rand v0.8.3 [INFO] [stderr] Checking crossbeam-epoch v0.9.3 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Compiling syn v1.0.64 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Checking regex v1.4.5 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Checking chrono v0.4.19 [INFO] [stderr] Checking rand_distr v0.2.2 [INFO] [stderr] Checking tempfile v3.2.0 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking env_logger v0.8.3 [INFO] [stderr] Checking globset v0.4.6 [INFO] [stderr] Checking pretty_env_logger v0.4.0 [INFO] [stderr] Checking ignore v0.4.17 [INFO] [stderr] Checking globwalk v0.8.1 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling pest_generator v2.1.3 [INFO] [stderr] Compiling parse-zoneinfo v0.3.0 [INFO] [stderr] Compiling chrono-tz v0.5.3 [INFO] [stderr] Compiling structopt-derive v0.4.14 [INFO] [stderr] Compiling pest_derive v2.1.0 [INFO] [stderr] Checking structopt v0.3.21 [INFO] [stderr] Checking toml v0.5.8 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking bimap v0.4.0 [INFO] [stderr] Checking envy v0.4.2 [INFO] [stderr] Checking alga v0.9.3 [INFO] [stderr] Checking handlebars v3.5.3 [INFO] [stderr] Checking tera v1.7.0 [INFO] [stderr] Checking nalgebra v0.20.0 [INFO] [stderr] Checking gchemol-gut v0.1.4 [INFO] [stderr] Checking gchemol-parser v0.2.1 [INFO] [stderr] Checking gchemol-graph v0.1.1 [INFO] [stderr] Checking vecfx v0.1.2 [INFO] [stderr] Checking gchemol-lattice v0.1.0 [INFO] [stderr] Checking octree v0.1.0 [INFO] [stderr] Checking gchemol-geometry v0.0.39 [INFO] [stderr] Checking gchemol-neighbors v0.1.0 [INFO] [stderr] Checking gchemol-core v0.0.42 [INFO] [stderr] Checking gchemol-readwrite v0.0.41 [INFO] [stderr] Checking gchemol v0.0.41 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `gchemol::prelude::*` [INFO] [stdout] --> tests/molecule.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use gchemol::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `mol` [INFO] [stdout] --> tests/io.rs:44:9 [INFO] [stdout] | [INFO] [stdout] 44 | for mol in gchemol::io::read(&f).expect("read mol2") { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_mol` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 19s [INFO] running `Command { std: "docker" "inspect" "79278bb278f3b7bada47b942a1d593ede8c7903feec8cec77cfec92e316648d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "79278bb278f3b7bada47b942a1d593ede8c7903feec8cec77cfec92e316648d3", kill_on_drop: false }` [INFO] [stdout] 79278bb278f3b7bada47b942a1d593ede8c7903feec8cec77cfec92e316648d3