[INFO] fetching crate d4utils 0.1.16... [INFO] checking d4utils-0.1.16 against try#8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8 for pr-82565 [INFO] extracting crate d4utils 0.1.16 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate d4utils 0.1.16 on toolchain 8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4utils 0.1.16 [INFO] finished tweaking crates.io crate d4utils 0.1.16 [INFO] tweaked toml for crates.io crate d4utils 0.1.16 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate crates.io crate d4utils 0.1.16 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 59eca41e318c56b37e60477cb81232187ac47e79787f8a1dee931919ac80135d [INFO] running `Command { std: "docker" "start" "-a" "59eca41e318c56b37e60477cb81232187ac47e79787f8a1dee931919ac80135d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "59eca41e318c56b37e60477cb81232187ac47e79787f8a1dee931919ac80135d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "59eca41e318c56b37e60477cb81232187ac47e79787f8a1dee931919ac80135d", kill_on_drop: false }` [INFO] [stdout] 59eca41e318c56b37e60477cb81232187ac47e79787f8a1dee931919ac80135d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 300d1bce7a08bbf7501d6eb1e0b96dab419fd8800075e7c5321c50b8bd17a721 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "300d1bce7a08bbf7501d6eb1e0b96dab419fd8800075e7c5321c50b8bd17a721", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Checking adler v0.2.3 [INFO] [stderr] Compiling syn v1.0.53 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking termcolor v1.1.2 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.1 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling miniz_oxide v0.4.3 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling clang-sys v1.0.3 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.1 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking flate2 v1.0.19 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Checking d4-framefile v0.1.16 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Compiling regex v1.4.2 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Compiling d4-hts v0.1.16 [INFO] [stderr] Compiling d4-bigwig v0.1.16 [INFO] [stderr] error: failed to run custom build command for `d4-bigwig v0.1.16` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-bigwig-ccfb0cd763503f93/build-script-build` (exit code: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + cd /opt/rustwide/target/debug/build/d4-bigwig-db2804fa71a4b7c4/out [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-bigwig-db2804fa71a4b7c4/out/libBigWig [INFO] [stderr] + git clone -b 0.4.4 https://github.com/dpryan79/libBigWig [INFO] [stderr] Cloning into 'libBigWig'... [INFO] [stderr] fatal: unable to access 'https://github.com/dpryan79/libBigWig/': Could not resolve host: github.com [INFO] [stderr] + cd libBigWig [INFO] [stderr] build-lib.sh: line 12: cd: libBigWig: No such file or directory [INFO] [stderr] + perl -i -pe s/-lcurl//g Makefile [INFO] [stderr] Can't open Makefile: No such file or directory. [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] ++ grep musl [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + tar xz [INFO] [stderr] + curl https://zlib.net/zlib-1.2.11.tar.gz [INFO] [stderr] % Total % Received % Xferd Average Speed Time Time Time Current [INFO] [stderr] Dload Upload Total Spent Left Speed [INFO] [stderr] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0curl: (6) Could not resolve host: zlib.net [INFO] [stderr] [INFO] [stderr] gzip: stdin: unexpected end of file [INFO] [stderr] tar: Child returned status 1 [INFO] [stderr] tar: Error is not recoverable: exiting now [INFO] [stderr] + cd zlib-1.2.11 [INFO] [stderr] build-lib.sh: line 29: cd: zlib-1.2.11: No such file or directory [INFO] [stderr] + is_musl [INFO] [stderr] ++ grep musl [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + return 1 [INFO] [stderr] + ./configure [INFO] [stderr] build-lib.sh: line 30: ./configure: No such file or directory [INFO] [stderr] + make [INFO] [stderr] make: *** No targets specified and no makefile found. Stop. [INFO] [stderr] + cp libz.a .. [INFO] [stderr] cp: cannot stat 'libz.a': No such file or directory [INFO] [stderr] + cd .. [INFO] [stderr] + CFLAGS='-DNOCURL -O3 -Izlib-1.2.11' [INFO] [stderr] + make -j8 lib-static [INFO] [stderr] make: *** No rule to make target 'lib-static'. Stop. [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build-lib.sh\", lib_root.to_str().unwrap(),\n \"0.4.4\"]).spawn().expect(\"Unable to build libBigWig\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.16/build.rs:25:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x563ce0b1ac30 - std::backtrace_rs::backtrace::libunwind::trace::h9d49145f95eb5894 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x563ce0b1ac30 - std::backtrace_rs::backtrace::trace_unsynchronized::hab1d020365bb6864 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x563ce0b1ac30 - std::sys_common::backtrace::_print_fmt::h7659588431e304bd [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x563ce0b1ac30 - ::fmt::h09f4a9e3befae3c7 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x563ce0b3d6ac - core::fmt::write::hf3fdfde304b9a088 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/core/src/fmt/mod.rs:1092:17 [INFO] [stderr] 5: 0x563ce0b17172 - std::io::Write::write_fmt::h1cb850689c7116f0 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/io/mod.rs:1568:15 [INFO] [stderr] 6: 0x563ce0b1d025 - std::sys_common::backtrace::_print::hdbccd5aa093ba544 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x563ce0b1d025 - std::sys_common::backtrace::print::hc639c4f320222558 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x563ce0b1d025 - std::panicking::default_hook::{{closure}}::hdb012dd7a485bb5d [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x563ce0b1cad3 - std::panicking::default_hook::h75facbce77b6ba91 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x563ce0b1d7c1 - std::panicking::rust_panic_with_hook::hbcaa5de2cb5e22d5 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x563ce0b1d2d7 - std::panicking::begin_panic_handler::{{closure}}::h4ee6cde415c8f62d [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x563ce0b1b0ec - std::sys_common::backtrace::__rust_end_short_backtrace::h895319f2d3f611c0 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x563ce0b1d269 - rust_begin_unwind [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x563ce0b3bba1 - core::panicking::panic_fmt::h0123abb763a6e96f [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x563ce0b3baed - core::panicking::panic::hdf1b6c818ad7c6ad [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x563ce058e93b - build_script_build::main::h5cab440c609e2b99 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.16/build.rs:25:5 [INFO] [stderr] 17: 0x563ce05916eb - core::ops::function::FnOnce::call_once::hf53e63320a46f44f [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 18: 0x563ce058f30e - std::sys_common::backtrace::__rust_begin_short_backtrace::h863a7f259383a516 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 19: 0x563ce058f631 - std::rt::lang_start::{{closure}}::h4d2f0e7ce9bac755 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/rt.rs:66:18 [INFO] [stderr] 20: 0x563ce0b1dcca - core::ops::function::impls:: for &F>::call_once::h31ee16c075ae2d62 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 21: 0x563ce0b1dcca - std::panicking::try::do_call::h3993344bf97066b6 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:379:40 [INFO] [stderr] 22: 0x563ce0b1dcca - std::panicking::try::h09e523df7c9c2d28 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panicking.rs:343:19 [INFO] [stderr] 23: 0x563ce0b1dcca - std::panic::catch_unwind::h9d4ddb10ebb815ff [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/panic.rs:431:14 [INFO] [stderr] 24: 0x563ce0b1dcca - std::rt::lang_start_internal::hc92e27a69d75de2a [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/rt.rs:51:25 [INFO] [stderr] 25: 0x563ce058f607 - std::rt::lang_start::h1e851c3fbbac6403 [INFO] [stderr] at /rustc/8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8/library/std/src/rt.rs:65:5 [INFO] [stderr] 26: 0x563ce058ebda - main [INFO] [stderr] 27: 0x7fd5670590b3 - __libc_start_main [INFO] [stderr] 28: 0x563ce058e0be - _start [INFO] [stderr] 29: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "300d1bce7a08bbf7501d6eb1e0b96dab419fd8800075e7c5321c50b8bd17a721", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "300d1bce7a08bbf7501d6eb1e0b96dab419fd8800075e7c5321c50b8bd17a721", kill_on_drop: false }` [INFO] [stdout] 300d1bce7a08bbf7501d6eb1e0b96dab419fd8800075e7c5321c50b8bd17a721