[INFO] cloning repository https://github.com/guertinlab/seqOutBias
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/seqOutBias" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 67da62f4574d2f3dbe7243ab817d5a885bbb257d
[INFO] checking guertinlab/seqOutBias against try#8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8 for pr-82565
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/guertinlab/seqOutBias on toolchain 8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/guertinlab/seqOutBias
[INFO] finished tweaking git repo https://github.com/guertinlab/seqOutBias
[INFO] tweaked toml for git repo https://github.com/guertinlab/seqOutBias written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] crate git repo https://github.com/guertinlab/seqOutBias already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7a0bb61b25cf5e7657169b717b71c28eb073ef8bcc3db34a459c456acbf11855
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "7a0bb61b25cf5e7657169b717b71c28eb073ef8bcc3db34a459c456acbf11855", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7a0bb61b25cf5e7657169b717b71c28eb073ef8bcc3db34a459c456acbf11855", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7a0bb61b25cf5e7657169b717b71c28eb073ef8bcc3db34a459c456acbf11855", kill_on_drop: false }`
[INFO] [stdout] 7a0bb61b25cf5e7657169b717b71c28eb073ef8bcc3db34a459c456acbf11855
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+8e3afc79c11f48cb3acd1be5b3b7de98fe3f93a8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0ef711499b9a7fbb11d671fd19a3991add95c1655847d63033529e3bdc0cea74
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "0ef711499b9a7fbb11d671fd19a3991add95c1655847d63033529e3bdc0cea74", kill_on_drop: false }`
[INFO] [stderr]     Checking libc v0.2.43
[INFO] [stderr]    Compiling proc-macro2 v0.4.23
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]     Checking winapi v0.2.8
[INFO] [stderr]    Compiling gcc v0.3.45
[INFO] [stderr]     Checking matches v0.1.6
[INFO] [stderr]     Checking cfg-if v0.1.6
[INFO] [stderr]    Compiling serde v1.0.80
[INFO] [stderr]    Compiling ryu v0.2.7
[INFO] [stderr]    Compiling num-traits v0.2.6
[INFO] [stderr]     Checking unicode-normalization v0.1.5
[INFO] [stderr]     Checking percent-encoding v1.0.0
[INFO] [stderr]     Checking utf8-ranges v0.1.3
[INFO] [stderr]     Checking regex-syntax v0.3.9
[INFO] [stderr]     Checking either v1.1.0
[INFO] [stderr]     Checking lazy_static v0.2.6
[INFO] [stderr]    Compiling rust-htslib v0.12.1
[INFO] [stderr]    Compiling regex v1.0.6
[INFO] [stderr]     Checking rustc-serialize v0.3.23
[INFO] [stderr]     Checking lazy_static v1.2.0
[INFO] [stderr]     Checking ucd-util v0.1.3
[INFO] [stderr]     Checking strsim v0.5.2
[INFO] [stderr]    Compiling escargot v0.2.0
[INFO] [stderr]     Checking serde v0.7.15
[INFO] [stderr]     Checking byteorder v0.5.3
[INFO] [stderr]     Checking ieee754 v0.2.2
[INFO] [stderr]     Checking utf8-ranges v1.0.2
[INFO] [stderr]     Checking itoa v0.4.3
[INFO] [stderr]     Checking num-traits v0.1.37
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking quick-error v1.2.0
[INFO] [stderr]     Checking bitflags v0.9.1
[INFO] [stderr]     Checking difference v2.0.0
[INFO] [stderr]     Checking remove_dir_all v0.5.1
[INFO] [stderr]     Checking fs_extra v1.1.0
[INFO] [stderr]    Compiling memchr v2.1.1
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]     Checking itertools v0.6.0
[INFO] [stderr]     Checking thread_local v0.3.6
[INFO] [stderr]     Checking regex-syntax v0.6.3
[INFO] [stderr]    Compiling kernel32-sys v0.2.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling seqOutBias v1.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking memchr v0.1.11
[INFO] [stderr]     Checking rand v0.4.3
[INFO] [stderr]     Checking aho-corasick v0.5.3
[INFO] [stderr]     Checking thread-id v2.0.0
[INFO] [stderr]     Checking idna v0.1.2
[INFO] [stderr]     Checking thread_local v0.2.7
[INFO] [stderr]     Checking regex v0.1.80
[INFO] [stderr]    Compiling miniz-sys v0.1.9
[INFO] [stderr]     Checking rand v0.3.22
[INFO] [stderr]     Checking tempdir v0.3.7
[INFO] [stderr]    Compiling quote v0.6.10
[INFO] [stderr]     Checking aho-corasick v0.6.9
[INFO] [stderr]     Checking tempfile v2.2.0
[INFO] [stderr]    Compiling syn v0.15.20
[INFO] [stderr]     Checking float-cmp v0.4.0
[INFO] [stderr]     Checking url v1.7.2
[INFO] [stderr]     Checking flate2 v0.2.18
[INFO] [stderr]     Checking bincode v0.5.9
[INFO] [stderr]     Checking docopt v0.6.86
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/tallyread.rs:75:9
[INFO] [stdout]    |
[INFO] [stdout] 75 |         try!(result.read_sequence_data());
[INFO] [stdout]    |         ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/tallyread.rs:106:40
[INFO] [stdout]     |
[INFO] [stdout] 106 |             let (seq, pos, is_minus) = try!(parse_line(&self.line));
[INFO] [stdout]     |                                        ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/tallyread.rs:141:9
[INFO] [stdout]     |
[INFO] [stdout] 141 |         try!(self.read_sequence_data());
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:47:9
[INFO] [stdout]    |
[INFO] [stdout] 47 |         try!(writer.write_u8(super::TBL_VERSION));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:49:9
[INFO] [stdout]    |
[INFO] [stdout] 49 |         try!(writer.write_u8(params.kmer_length));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:50:9
[INFO] [stdout]    |
[INFO] [stdout] 50 |         try!(writer.write_u8(params.unmasked_count));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:52:9
[INFO] [stdout]    |
[INFO] [stdout] 52 |         try!(writer.write_u8(params.plus_offset));  
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:53:9
[INFO] [stdout]    |
[INFO] [stdout] 53 |         try!(writer.write_u8(params.minus_offset));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:54:9
[INFO] [stdout]    |
[INFO] [stdout] 54 |         try!(writer.write_u16::<LittleEndian>(params.read_length));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:59:21
[INFO] [stdout]    |
[INFO] [stdout] 59 |                     try!(writer.write_u8(1));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:61:21
[INFO] [stdout]    |
[INFO] [stdout] 61 |                     try!(writer.write_u8(0));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:67:9
[INFO] [stdout]    |
[INFO] [stdout] 67 |         try!(writer.write_u32::<LittleEndian>(blen));        
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:70:9
[INFO] [stdout]    |
[INFO] [stdout] 70 |         try!(writer.write_u64::<LittleEndian>(0));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:72:9
[INFO] [stdout]    |
[INFO] [stdout] 72 |         try!(writer.write_u64::<LittleEndian>(0));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:74:9
[INFO] [stdout]    |
[INFO] [stdout] 74 |         try!(writer.write_u64::<LittleEndian>(0));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/write.rs:168:9
[INFO] [stdout]     |
[INFO] [stdout] 168 |         try!(self.writer.write(&self.output[0..(total as usize)]));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:37:9
[INFO] [stdout]    |
[INFO] [stdout] 37 |         try!(reader.seek(SeekFrom::Start(0)));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:39:23
[INFO] [stdout]    |
[INFO] [stdout] 39 |         let version = try!(reader.read_u8());
[INFO] [stdout]    |                       ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:44:18
[INFO] [stdout]    |
[INFO] [stdout] 44 |         let cl = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:45:18
[INFO] [stdout]    |
[INFO] [stdout] 45 |         let uc = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:46:18
[INFO] [stdout]    |
[INFO] [stdout] 46 |         let po = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:47:18
[INFO] [stdout]    |
[INFO] [stdout] 47 |         let mo = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:48:18
[INFO] [stdout]    |
[INFO] [stdout] 48 |         let rl = try!(reader.read_u16::<LittleEndian>());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:53:28
[INFO] [stdout]    |
[INFO] [stdout] 53 |                 let flag = try!(reader.read_u8());
[INFO] [stdout]    |                            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:71:20
[INFO] [stdout]    |
[INFO] [stdout] 71 |         let blen = try!(reader.read_u32::<LittleEndian>());
[INFO] [stdout]    |                    ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:73:22
[INFO] [stdout]    |
[INFO] [stdout] 73 |         let offset = try!(reader.read_u64::<LittleEndian>());
[INFO] [stdout]    |                      ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:75:23
[INFO] [stdout]    |
[INFO] [stdout] 75 |         let bufsize = try!(reader.read_u64::<LittleEndian>()) as usize;
[INFO] [stdout]    |                       ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:77:29
[INFO] [stdout]    |
[INFO] [stdout] 77 |         let counts_offset = try!(reader.read_u64::<LittleEndian>());
[INFO] [stdout]    |                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:82:9
[INFO] [stdout]    |
[INFO] [stdout] 82 |         try!(reader.seek(SeekFrom::Start(offset)));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:102:25
[INFO] [stdout]     |
[INFO] [stdout] 102 |                         try!(self.reader.seek(SeekFrom::Start(block.offset)));
[INFO] [stdout]     |                         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:127:21
[INFO] [stdout]     |
[INFO] [stdout] 127 |                     try!(self.reader.seek(SeekFrom::Start(block.offset)));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:161:9
[INFO] [stdout]     |
[INFO] [stdout] 161 |         try!(self.reader.seek(SeekFrom::Start(self.counts_offset)));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:198:9
[INFO] [stdout]     |
[INFO] [stdout] 198 |         try!(self.reader.seek(SeekFrom::Start(block_info.offset)));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:199:9
[INFO] [stdout]     |
[INFO] [stdout] 199 |         try!(self.reader.read(buf));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:226:31
[INFO] [stdout]     |
[INFO] [stdout] 226 |                     let aux = try!(self.read_block(block_info));
[INFO] [stdout]     |                               ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `fasta::reverse_complement`
[INFO] [stdout]   --> src/counts.rs:25:5
[INFO] [stdout]    |
[INFO] [stdout] 25 | use fasta::reverse_complement;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/counts.rs:101:16
[INFO] [stdout]     |
[INFO] [stdout] 101 |     let file = try!(File::open(filename));
[INFO] [stdout]     |                ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/counts.rs:112:18
[INFO] [stdout]     |
[INFO] [stdout] 112 |       let line = try!(res);
[INFO] [stdout]     |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:22:17
[INFO] [stdout]    |
[INFO] [stdout] 22 |     let mut f = try!(File::create(filename));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:25:9
[INFO] [stdout]    |
[INFO] [stdout] 25 |         try!(write!(f, "{}\t{}\n", chroms[index], chrom_sizes[index]));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:33:17
[INFO] [stdout]    |
[INFO] [stdout] 33 |     let mut f = try!(File::create(filename));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:39:9
[INFO] [stdout]    |
[INFO] [stdout] 39 |         try!(write!(f, "variableStep chrom={}\n", chrom));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:45:53
[INFO] [stdout]    |
[INFO] [stdout] 45 |                 Strand::Plus => if value.0 > 0f64 { try!(write!(f, "{}\t{}\n", pos, value.0)) },
[INFO] [stdout]    |                                                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:46:54
[INFO] [stdout]    |
[INFO] [stdout] 46 |                 Strand::Minus => if value.1 > 0f64 { try!(write!(f, "{}\t{}\n", pos, -value.1)) },
[INFO] [stdout]    |                                                      ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:47:33
[INFO] [stdout]    |
[INFO] [stdout] 47 |                 Strand::Both => try!(write!(f, "{}\t{}\n", pos, value.0 + value.1)),
[INFO] [stdout]    |                                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:78:9
[INFO] [stdout]    |
[INFO] [stdout] 78 |         try!(write_chrom_info(chrominfo_name, chroms, chrom_sizes));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:83:9
[INFO] [stdout]    |
[INFO] [stdout] 83 |         try!(write_wiggle(wiggle_name, chroms, counts, strand));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `fasta::reverse_complement`
[INFO] [stdout]   --> src/scale.rs:25:5
[INFO] [stdout]    |
[INFO] [stdout] 25 | use fasta::reverse_complement;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:106:21
[INFO] [stdout]     |
[INFO] [stdout] 106 |         let mut f = try!(File::create(filename));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:116:25
[INFO] [stdout]     |
[INFO] [stdout] 116 |                         try!(write!(f, "{}\t{}\t{}\t.\t{}\t+\n", chrom, pos, pos + 1, value.0));
[INFO] [stdout]     |                         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:119:25
[INFO] [stdout]     |
[INFO] [stdout] 119 |                         try!(write!(f, "{}\t{}\t{}\t.\t{}\t-\n", chrom, pos, pos + 1, -value.1));
[INFO] [stdout]     |                         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:122:21
[INFO] [stdout]     |
[INFO] [stdout] 122 |                     try!(write!(f, "{}\t{}\t{}\t.\t{}\n", chrom, pos, pos + 1, value.0 + value.1));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:152:21
[INFO] [stdout]     |
[INFO] [stdout] 152 |                     try!(write_bigwig(&output_minus, &self.chroms, &self.chrom_sizes, &self.counts, Strand::Minus));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:158:13
[INFO] [stdout]     |
[INFO] [stdout] 158 |             try!(write_bigwig(OsStr::new(filename), &self.chroms, &self.chrom_sizes, &self.counts, Strand::Both));
[INFO] [stdout]     |             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/seqtable/mod.rs:66:86
[INFO] [stdout]    |
[INFO] [stdout] 66 |         println!("Error: Failed to open sequence table file '{}': {}", filename, err.description());
[INFO] [stdout]    |                                                                                      ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/seqtable/dump.rs:52:90
[INFO] [stdout]    |
[INFO] [stdout] 52 |             println!("Error: failed to open sequence table file '{}': {}", filename, err.description());
[INFO] [stdout]    |                                                                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/seqtable/dump.rs:94:90
[INFO] [stdout]    |
[INFO] [stdout] 94 |             println!("Error: failed to open sequence table file '{}': {}", filename, err.description());
[INFO] [stdout]    |                                                                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/counts.rs:254:75
[INFO] [stdout]     |
[INFO] [stdout] 254 |             println!("Error: Failed to read BED file {}: {}", filename, e.description()); 
[INFO] [stdout]     |                                                                           ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/counts.rs:295:78
[INFO] [stdout]     |
[INFO] [stdout] 295 |             println!("Error: Failed to open BAM '{}': {}", &bamfilename, err.description());
[INFO] [stdout]     |                                                                              ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/counts.rs:353:89
[INFO] [stdout]     |
[INFO] [stdout] 353 |             println!("Error: Failed to open sequence table file '{}': {}", seqfile, err.description());
[INFO] [stdout]     |                                                                                         ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/scale.rs:208:89
[INFO] [stdout]     |
[INFO] [stdout] 208 |             println!("Error: Failed to open sequence table file '{}': {}", seqfile, err.description());
[INFO] [stdout]     |                                                                                         ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/scale.rs:237:82
[INFO] [stdout]     |
[INFO] [stdout] 237 |                 println!("Error: Failed to open BAM file '{}': {}", bamfile, err.description());
[INFO] [stdout]     |                                                                                  ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 62 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/main.rs:300:74
[INFO] [stdout]     |
[INFO] [stdout] 300 |                 Err(err) => println!("Error producing BED file: {}", err.description()),
[INFO] [stdout]     |                                                                          ^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/main.rs:318:77
[INFO] [stdout]     |
[INFO] [stdout] 318 |                 Err(err) => println!("Error producing BigWig file: {}", err.description()), 
[INFO] [stdout]     |                                                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling serde_derive v1.0.80
[INFO] [stderr]     Checking predicates v0.5.2
[INFO] [stderr]     Checking serde_json v1.0.33
[INFO] [stderr]     Checking assert_cmd v0.4.0
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/tallyread.rs:75:9
[INFO] [stdout]    |
[INFO] [stdout] 75 |         try!(result.read_sequence_data());
[INFO] [stdout]    |         ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/tallyread.rs:106:40
[INFO] [stdout]     |
[INFO] [stdout] 106 |             let (seq, pos, is_minus) = try!(parse_line(&self.line));
[INFO] [stdout]     |                                        ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/tallyread.rs:141:9
[INFO] [stdout]     |
[INFO] [stdout] 141 |         try!(self.read_sequence_data());
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:47:9
[INFO] [stdout]    |
[INFO] [stdout] 47 |         try!(writer.write_u8(super::TBL_VERSION));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:49:9
[INFO] [stdout]    |
[INFO] [stdout] 49 |         try!(writer.write_u8(params.kmer_length));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:50:9
[INFO] [stdout]    |
[INFO] [stdout] 50 |         try!(writer.write_u8(params.unmasked_count));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:52:9
[INFO] [stdout]    |
[INFO] [stdout] 52 |         try!(writer.write_u8(params.plus_offset));  
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:53:9
[INFO] [stdout]    |
[INFO] [stdout] 53 |         try!(writer.write_u8(params.minus_offset));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:54:9
[INFO] [stdout]    |
[INFO] [stdout] 54 |         try!(writer.write_u16::<LittleEndian>(params.read_length));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:59:21
[INFO] [stdout]    |
[INFO] [stdout] 59 |                     try!(writer.write_u8(1));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:61:21
[INFO] [stdout]    |
[INFO] [stdout] 61 |                     try!(writer.write_u8(0));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:67:9
[INFO] [stdout]    |
[INFO] [stdout] 67 |         try!(writer.write_u32::<LittleEndian>(blen));        
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:70:9
[INFO] [stdout]    |
[INFO] [stdout] 70 |         try!(writer.write_u64::<LittleEndian>(0));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:72:9
[INFO] [stdout]    |
[INFO] [stdout] 72 |         try!(writer.write_u64::<LittleEndian>(0));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/write.rs:74:9
[INFO] [stdout]    |
[INFO] [stdout] 74 |         try!(writer.write_u64::<LittleEndian>(0));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/write.rs:168:9
[INFO] [stdout]     |
[INFO] [stdout] 168 |         try!(self.writer.write(&self.output[0..(total as usize)]));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:37:9
[INFO] [stdout]    |
[INFO] [stdout] 37 |         try!(reader.seek(SeekFrom::Start(0)));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:39:23
[INFO] [stdout]    |
[INFO] [stdout] 39 |         let version = try!(reader.read_u8());
[INFO] [stdout]    |                       ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:44:18
[INFO] [stdout]    |
[INFO] [stdout] 44 |         let cl = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:45:18
[INFO] [stdout]    |
[INFO] [stdout] 45 |         let uc = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:46:18
[INFO] [stdout]    |
[INFO] [stdout] 46 |         let po = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:47:18
[INFO] [stdout]    |
[INFO] [stdout] 47 |         let mo = try!(reader.read_u8());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:48:18
[INFO] [stdout]    |
[INFO] [stdout] 48 |         let rl = try!(reader.read_u16::<LittleEndian>());
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:53:28
[INFO] [stdout]    |
[INFO] [stdout] 53 |                 let flag = try!(reader.read_u8());
[INFO] [stdout]    |                            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:71:20
[INFO] [stdout]    |
[INFO] [stdout] 71 |         let blen = try!(reader.read_u32::<LittleEndian>());
[INFO] [stdout]    |                    ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:73:22
[INFO] [stdout]    |
[INFO] [stdout] 73 |         let offset = try!(reader.read_u64::<LittleEndian>());
[INFO] [stdout]    |                      ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:75:23
[INFO] [stdout]    |
[INFO] [stdout] 75 |         let bufsize = try!(reader.read_u64::<LittleEndian>()) as usize;
[INFO] [stdout]    |                       ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:77:29
[INFO] [stdout]    |
[INFO] [stdout] 77 |         let counts_offset = try!(reader.read_u64::<LittleEndian>());
[INFO] [stdout]    |                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/seqtable/read.rs:82:9
[INFO] [stdout]    |
[INFO] [stdout] 82 |         try!(reader.seek(SeekFrom::Start(offset)));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:102:25
[INFO] [stdout]     |
[INFO] [stdout] 102 |                         try!(self.reader.seek(SeekFrom::Start(block.offset)));
[INFO] [stdout]     |                         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:127:21
[INFO] [stdout]     |
[INFO] [stdout] 127 |                     try!(self.reader.seek(SeekFrom::Start(block.offset)));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:161:9
[INFO] [stdout]     |
[INFO] [stdout] 161 |         try!(self.reader.seek(SeekFrom::Start(self.counts_offset)));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:198:9
[INFO] [stdout]     |
[INFO] [stdout] 198 |         try!(self.reader.seek(SeekFrom::Start(block_info.offset)));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:199:9
[INFO] [stdout]     |
[INFO] [stdout] 199 |         try!(self.reader.read(buf));
[INFO] [stdout]     |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/seqtable/read.rs:226:31
[INFO] [stdout]     |
[INFO] [stdout] 226 |                     let aux = try!(self.read_block(block_info));
[INFO] [stdout]     |                               ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `fasta::reverse_complement`
[INFO] [stdout]   --> src/counts.rs:25:5
[INFO] [stdout]    |
[INFO] [stdout] 25 | use fasta::reverse_complement;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/counts.rs:101:16
[INFO] [stdout]     |
[INFO] [stdout] 101 |     let file = try!(File::open(filename));
[INFO] [stdout]     |                ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/counts.rs:112:18
[INFO] [stdout]     |
[INFO] [stdout] 112 |       let line = try!(res);
[INFO] [stdout]     |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:22:17
[INFO] [stdout]    |
[INFO] [stdout] 22 |     let mut f = try!(File::create(filename));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:25:9
[INFO] [stdout]    |
[INFO] [stdout] 25 |         try!(write!(f, "{}\t{}\n", chroms[index], chrom_sizes[index]));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:33:17
[INFO] [stdout]    |
[INFO] [stdout] 33 |     let mut f = try!(File::create(filename));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:39:9
[INFO] [stdout]    |
[INFO] [stdout] 39 |         try!(write!(f, "variableStep chrom={}\n", chrom));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:45:53
[INFO] [stdout]    |
[INFO] [stdout] 45 |                 Strand::Plus => if value.0 > 0f64 { try!(write!(f, "{}\t{}\n", pos, value.0)) },
[INFO] [stdout]    |                                                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:46:54
[INFO] [stdout]    |
[INFO] [stdout] 46 |                 Strand::Minus => if value.1 > 0f64 { try!(write!(f, "{}\t{}\n", pos, -value.1)) },
[INFO] [stdout]    |                                                      ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:47:33
[INFO] [stdout]    |
[INFO] [stdout] 47 |                 Strand::Both => try!(write!(f, "{}\t{}\n", pos, value.0 + value.1)),
[INFO] [stdout]    |                                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:78:9
[INFO] [stdout]    |
[INFO] [stdout] 78 |         try!(write_chrom_info(chrominfo_name, chroms, chrom_sizes));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/bigwig.rs:83:9
[INFO] [stdout]    |
[INFO] [stdout] 83 |         try!(write_wiggle(wiggle_name, chroms, counts, strand));
[INFO] [stdout]    |         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `fasta::reverse_complement`
[INFO] [stdout]   --> src/scale.rs:25:5
[INFO] [stdout]    |
[INFO] [stdout] 25 | use fasta::reverse_complement;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:106:21
[INFO] [stdout]     |
[INFO] [stdout] 106 |         let mut f = try!(File::create(filename));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:116:25
[INFO] [stdout]     |
[INFO] [stdout] 116 |                         try!(write!(f, "{}\t{}\t{}\t.\t{}\t+\n", chrom, pos, pos + 1, value.0));
[INFO] [stdout]     |                         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:119:25
[INFO] [stdout]     |
[INFO] [stdout] 119 |                         try!(write!(f, "{}\t{}\t{}\t.\t{}\t-\n", chrom, pos, pos + 1, -value.1));
[INFO] [stdout]     |                         ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:122:21
[INFO] [stdout]     |
[INFO] [stdout] 122 |                     try!(write!(f, "{}\t{}\t{}\t.\t{}\n", chrom, pos, pos + 1, value.0 + value.1));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:152:21
[INFO] [stdout]     |
[INFO] [stdout] 152 |                     try!(write_bigwig(&output_minus, &self.chroms, &self.chrom_sizes, &self.counts, Strand::Minus));
[INFO] [stdout]     |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/scale.rs:158:13
[INFO] [stdout]     |
[INFO] [stdout] 158 |             try!(write_bigwig(OsStr::new(filename), &self.chroms, &self.chrom_sizes, &self.counts, Strand::Both));
[INFO] [stdout]     |             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/main.rs:300:74
[INFO] [stdout]     |
[INFO] [stdout] 300 |                 Err(err) => println!("Error producing BED file: {}", err.description()),
[INFO] [stdout]     |                                                                          ^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/main.rs:318:77
[INFO] [stdout]     |
[INFO] [stdout] 318 |                 Err(err) => println!("Error producing BigWig file: {}", err.description()), 
[INFO] [stdout]     |                                                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/seqtable/mod.rs:66:86
[INFO] [stdout]    |
[INFO] [stdout] 66 |         println!("Error: Failed to open sequence table file '{}': {}", filename, err.description());
[INFO] [stdout]    |                                                                                      ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/seqtable/dump.rs:52:90
[INFO] [stdout]    |
[INFO] [stdout] 52 |             println!("Error: failed to open sequence table file '{}': {}", filename, err.description());
[INFO] [stdout]    |                                                                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/seqtable/dump.rs:94:90
[INFO] [stdout]    |
[INFO] [stdout] 94 |             println!("Error: failed to open sequence table file '{}': {}", filename, err.description());
[INFO] [stdout]    |                                                                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/counts.rs:254:75
[INFO] [stdout]     |
[INFO] [stdout] 254 |             println!("Error: Failed to read BED file {}: {}", filename, e.description()); 
[INFO] [stdout]     |                                                                           ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/counts.rs:295:78
[INFO] [stdout]     |
[INFO] [stdout] 295 |             println!("Error: Failed to open BAM '{}': {}", &bamfilename, err.description());
[INFO] [stdout]     |                                                                              ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/counts.rs:353:89
[INFO] [stdout]     |
[INFO] [stdout] 353 |             println!("Error: Failed to open sequence table file '{}': {}", seqfile, err.description());
[INFO] [stdout]     |                                                                                         ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/scale.rs:208:89
[INFO] [stdout]     |
[INFO] [stdout] 208 |             println!("Error: Failed to open sequence table file '{}': {}", seqfile, err.description());
[INFO] [stdout]     |                                                                                         ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/scale.rs:237:82
[INFO] [stdout]     |
[INFO] [stdout] 237 |                 println!("Error: Failed to open BAM file '{}': {}", bamfile, err.description());
[INFO] [stdout]     |                                                                                  ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 62 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 41.03s
[INFO] running `Command { std: "docker" "inspect" "0ef711499b9a7fbb11d671fd19a3991add95c1655847d63033529e3bdc0cea74", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0ef711499b9a7fbb11d671fd19a3991add95c1655847d63033529e3bdc0cea74", kill_on_drop: false }`
[INFO] [stdout] 0ef711499b9a7fbb11d671fd19a3991add95c1655847d63033529e3bdc0cea74