[INFO] fetching crate d4 0.1.16... [INFO] checking d4-0.1.16 against master#3e826bb11228508fbe749e594038d6727208aa94 for pr-82322 [INFO] extracting crate d4 0.1.16 into /workspace/builds/worker-8/source [INFO] validating manifest of crates.io crate d4 0.1.16 on toolchain 3e826bb11228508fbe749e594038d6727208aa94 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3e826bb11228508fbe749e594038d6727208aa94" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4 0.1.16 [INFO] finished tweaking crates.io crate d4 0.1.16 [INFO] tweaked toml for crates.io crate d4 0.1.16 written to /workspace/builds/worker-8/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3e826bb11228508fbe749e594038d6727208aa94" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3e826bb11228508fbe749e594038d6727208aa94" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+3e826bb11228508fbe749e594038d6727208aa94" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6b7b71e148ec40df6279ab7c005eb66b5307e0ea6e9073b292992597d7b4d359 [INFO] running `Command { std: "docker" "start" "-a" "6b7b71e148ec40df6279ab7c005eb66b5307e0ea6e9073b292992597d7b4d359", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6b7b71e148ec40df6279ab7c005eb66b5307e0ea6e9073b292992597d7b4d359", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6b7b71e148ec40df6279ab7c005eb66b5307e0ea6e9073b292992597d7b4d359", kill_on_drop: false }` [INFO] [stdout] 6b7b71e148ec40df6279ab7c005eb66b5307e0ea6e9073b292992597d7b4d359 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+3e826bb11228508fbe749e594038d6727208aa94" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d69043bcf7e40b046bdf2140b7212ef34291be25f53fb5ad1504471c24aae262 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d69043bcf7e40b046bdf2140b7212ef34291be25f53fb5ad1504471c24aae262", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling clang-sys v1.1.1 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling libc v0.2.87 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking serde_json v1.0.64 [INFO] [stderr] Checking crc32fast v1.2.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking crossbeam-epoch v0.9.3 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Compiling regex v1.4.3 [INFO] [stderr] Checking d4-framefile v0.1.16 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling d4-hts v0.1.16 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.1.16` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-683ee0664d41b59d/build-script-build` (exit code: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-9da5257b65ebd54c/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-9da5257b65ebd54c/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.16/build.rs:34:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x559c53c65910 - std::backtrace_rs::backtrace::libunwind::trace::hb4de9797f80b7b8c [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x559c53c65910 - std::backtrace_rs::backtrace::trace_unsynchronized::h59566d0bd20efff7 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x559c53c65910 - std::sys_common::backtrace::_print_fmt::hcfa5ce6be50275d4 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x559c53c65910 - ::fmt::hd8c307a38b9bab04 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x559c53c886dc - core::fmt::write::h3868db8542c90941 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/core/src/fmt/mod.rs:1092:17 [INFO] [stderr] 5: 0x559c53c61c12 - std::io::Write::write_fmt::hab90295d5a0f197d [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/io/mod.rs:1568:15 [INFO] [stderr] 6: 0x559c53c67e45 - std::sys_common::backtrace::_print::h19224910b8700cf1 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x559c53c67e45 - std::sys_common::backtrace::print::h25dedfa68c5fb84a [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x559c53c67e45 - std::panicking::default_hook::{{closure}}::h12c5765653a72a42 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x559c53c678f3 - std::panicking::default_hook::he65cee71c4209f0c [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x559c53c685e1 - std::panicking::rust_panic_with_hook::h01a674d863fe0d8a [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x559c53c680f7 - std::panicking::begin_panic_handler::{{closure}}::h9b9fecf185178864 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x559c53c65dac - std::sys_common::backtrace::__rust_end_short_backtrace::h57be46a42dc7f24b [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x559c53c68089 - rust_begin_unwind [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x559c53c86bd1 - core::panicking::panic_fmt::h20225113c4a2f8fd [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x559c53c86b1d - core::panicking::panic::h35b77276aa4b0c12 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x559c536a79ac - build_script_build::build_own_htslib::h6104b34e147436d4 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.16/build.rs:34:5 [INFO] [stderr] 17: 0x559c536a7eb4 - build_script_build::main::hab5a9c4b25de161c [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.16/build.rs:66:9 [INFO] [stderr] 18: 0x559c536a8a7b - core::ops::function::FnOnce::call_once::h23a6f530971fb680 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x559c536a8e1e - std::sys_common::backtrace::__rust_begin_short_backtrace::ha1f15a6eb8dd16d0 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x559c536a9701 - std::rt::lang_start::{{closure}}::h067a26c8f4d43ea9 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/rt.rs:66:18 [INFO] [stderr] 21: 0x559c53c68aea - core::ops::function::impls:: for &F>::call_once::h2c4fd7d4128112a8 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x559c53c68aea - std::panicking::try::do_call::h41fb7dbbbe7bece6 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:379:40 [INFO] [stderr] 23: 0x559c53c68aea - std::panicking::try::hd38008ccba72bce1 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panicking.rs:343:19 [INFO] [stderr] 24: 0x559c53c68aea - std::panic::catch_unwind::h057e765cd60f2d13 [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/panic.rs:431:14 [INFO] [stderr] 25: 0x559c53c68aea - std::rt::lang_start_internal::hdb9d0b9d2cdcda8b [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/rt.rs:51:25 [INFO] [stderr] 26: 0x559c536a96d7 - std::rt::lang_start::h5410aa190a869c6c [INFO] [stderr] at /rustc/3e826bb11228508fbe749e594038d6727208aa94/library/std/src/rt.rs:65:5 [INFO] [stderr] 27: 0x559c536a84da - main [INFO] [stderr] 28: 0x7fcdb0d090b3 - __libc_start_main [INFO] [stderr] 29: 0x559c536a70be - _start [INFO] [stderr] 30: 0x0 - [INFO] running `Command { std: "docker" "inspect" "d69043bcf7e40b046bdf2140b7212ef34291be25f53fb5ad1504471c24aae262", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d69043bcf7e40b046bdf2140b7212ef34291be25f53fb5ad1504471c24aae262", kill_on_drop: false }` [INFO] [stdout] d69043bcf7e40b046bdf2140b7212ef34291be25f53fb5ad1504471c24aae262