[INFO] fetching crate diffuse 0.1.1... [INFO] checking diffuse-0.1.1 against try#9c1dcf141bc0875407c4eb36972857bd3db713e2 for pr-81863 [INFO] extracting crate diffuse 0.1.1 into /workspace/builds/worker-1/source [INFO] validating manifest of crates.io crate diffuse 0.1.1 on toolchain 9c1dcf141bc0875407c4eb36972857bd3db713e2 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9c1dcf141bc0875407c4eb36972857bd3db713e2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate diffuse 0.1.1 [INFO] finished tweaking crates.io crate diffuse 0.1.1 [INFO] tweaked toml for crates.io crate diffuse 0.1.1 written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate crates.io crate diffuse 0.1.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9c1dcf141bc0875407c4eb36972857bd3db713e2" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+9c1dcf141bc0875407c4eb36972857bd3db713e2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d65aa5440583a63b4024e15eca4b295558eae1a6bf8a3625c610f0d73ebbf5e1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d65aa5440583a63b4024e15eca4b295558eae1a6bf8a3625c610f0d73ebbf5e1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d65aa5440583a63b4024e15eca4b295558eae1a6bf8a3625c610f0d73ebbf5e1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d65aa5440583a63b4024e15eca4b295558eae1a6bf8a3625c610f0d73ebbf5e1", kill_on_drop: false }` [INFO] [stdout] d65aa5440583a63b4024e15eca4b295558eae1a6bf8a3625c610f0d73ebbf5e1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+9c1dcf141bc0875407c4eb36972857bd3db713e2" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e297c0b46ad7e33bc0f5d9eb1cf086fb0ac794be57d8255682972636604400fb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e297c0b46ad7e33bc0f5d9eb1cf086fb0ac794be57d8255682972636604400fb", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.48 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling siphasher v0.3.3 [INFO] [stderr] Compiling cc v1.0.62 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling typenum v1.12.0 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling netcdf-sys v0.3.3 [INFO] [stderr] Checking adler32 v1.2.0 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking ucd-trie v0.1.3 [INFO] [stderr] Compiling paste v1.0.2 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Checking bytemuck v1.4.1 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking hashbrown v0.9.1 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking slice-of-array v0.2.1 [INFO] [stderr] Checking hex v0.4.2 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.0 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Checking miniz_oxide v0.3.7 [INFO] [stderr] Checking pest v2.1.3 [INFO] [stderr] Checking rgb v0.8.25 [INFO] [stderr] Compiling generic-array v0.14.4 [INFO] [stderr] Checking libc v0.2.80 [INFO] [stderr] Checking libm v0.2.1 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Checking byteorder v1.3.4 [INFO] [stderr] Checking crc32fast v1.2.1 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking phf v0.8.0 [INFO] [stderr] Checking ansi_rgb v0.2.0 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking terminal_size v0.1.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Checking deflate v0.8.6 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Checking crossbeam-epoch v0.9.0 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking png v0.16.7 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Checking regex v1.4.2 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking noisy_float v0.1.13 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Checking rand_distr v0.3.0 [INFO] [stderr] Checking console v0.13.0 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] Compiling pest_generator v2.1.3 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Checking ndarray-parallel v0.9.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-d9fc9792c8caac7a/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5578886f0930 - std::backtrace_rs::backtrace::libunwind::trace::hb4de9797f80b7b8c [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x5578886f0930 - std::backtrace_rs::backtrace::trace_unsynchronized::h59566d0bd20efff7 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5578886f0930 - std::sys_common::backtrace::_print_fmt::hcfa5ce6be50275d4 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5578886f0930 - ::fmt::hd8c307a38b9bab04 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55788870ca5c - core::fmt::write::h3868db8542c90941 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/core/src/fmt/mod.rs:1096:17 [INFO] [stderr] 5: 0x5578886ed1d2 - std::io::Write::write_fmt::hab90295d5a0f197d [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/io/mod.rs:1568:15 [INFO] [stderr] 6: 0x5578886f29b5 - std::sys_common::backtrace::_print::h19224910b8700cf1 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5578886f29b5 - std::sys_common::backtrace::print::h25dedfa68c5fb84a [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5578886f29b5 - std::panicking::default_hook::{{closure}}::h12c5765653a72a42 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x5578886f2513 - std::panicking::default_hook::he65cee71c4209f0c [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x5578886f3151 - std::panicking::rust_panic_with_hook::h01a674d863fe0d8a [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x5578885d158e - std::panicking::begin_panic::{{closure}}::h19b4184239818cad [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x5578885f2e59 - std::sys_common::backtrace::__rust_end_short_backtrace::hd415cf9fb3b30a90 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x5578885d14bb - std::panicking::begin_panic::h0b86ee9f5681340d [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x5578884cc07b - build_script_build::LibrarySearcher::try_locate_hdf5_library::hb16737d5107ad56a [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x5578884cd8d5 - build_script_build::main::h1726a79c93d28cdd [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x5578884d7f6b - core::ops::function::FnOnce::call_once::h87ed3503f2ede79f [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x5578884d19ce - std::sys_common::backtrace::__rust_begin_short_backtrace::ha05fb1b5bc8bd968 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x5578884d9de1 - std::rt::lang_start::{{closure}}::hd672ed9ac884c53a [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x5578886f3577 - core::ops::function::impls:: for &F>::call_once::h2c4fd7d4128112a8 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x5578886f3577 - std::panicking::try::do_call::h41fb7dbbbe7bece6 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x5578886f3577 - std::panicking::try::hd38008ccba72bce1 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x5578886f3577 - std::panic::catch_unwind::h057e765cd60f2d13 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/panic.rs:431:14 [INFO] [stderr] 23: 0x5578886f3577 - std::rt::lang_start_internal::hdb9d0b9d2cdcda8b [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x5578884d9db7 - std::rt::lang_start::h744f60e49d5fe9a4 [INFO] [stderr] at /rustc/9c1dcf141bc0875407c4eb36972857bd3db713e2/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x5578884cef1a - main [INFO] [stderr] 26: 0x7f8ef876f0b3 - __libc_start_main [INFO] [stderr] 27: 0x5578884c70be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "e297c0b46ad7e33bc0f5d9eb1cf086fb0ac794be57d8255682972636604400fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e297c0b46ad7e33bc0f5d9eb1cf086fb0ac794be57d8255682972636604400fb", kill_on_drop: false }` [INFO] [stdout] e297c0b46ad7e33bc0f5d9eb1cf086fb0ac794be57d8255682972636604400fb