[INFO] fetching crate fastq-count 0.1.0... [INFO] checking fastq-count-0.1.0 against master#36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923 for pr-81863 [INFO] extracting crate fastq-count 0.1.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate fastq-count 0.1.0 on toolchain 36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate fastq-count 0.1.0 [INFO] finished tweaking crates.io crate fastq-count 0.1.0 [INFO] tweaked toml for crates.io crate fastq-count 0.1.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2cb2786cf215403a7ea0bd3dfa3fd4115eb7a3b726a6ae0d05220bbf84dfd9a0 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2cb2786cf215403a7ea0bd3dfa3fd4115eb7a3b726a6ae0d05220bbf84dfd9a0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2cb2786cf215403a7ea0bd3dfa3fd4115eb7a3b726a6ae0d05220bbf84dfd9a0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2cb2786cf215403a7ea0bd3dfa3fd4115eb7a3b726a6ae0d05220bbf84dfd9a0", kill_on_drop: false }` [INFO] [stdout] 2cb2786cf215403a7ea0bd3dfa3fd4115eb7a3b726a6ae0d05220bbf84dfd9a0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+36ecbc94eb6be90bc38b2d0fdd4bfac3f34d9923" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 143a8c1a76ee5eb3c5e4fabed9c72c78922e2c7b8499f58e607c3ef361beb2af [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "143a8c1a76ee5eb3c5e4fabed9c72c78922e2c7b8499f58e607c3ef361beb2af", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling serde_derive v1.0.123 [INFO] [stderr] Compiling serde v1.0.123 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling libc v0.2.85 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking once_cell v1.5.2 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling cc v1.0.66 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking regex-syntax v0.6.22 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking thread_local v1.1.3 [INFO] [stderr] Checking matrixmultiply v0.1.15 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling quote v1.0.8 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Compiling syn v1.0.60 [INFO] [stderr] Checking flate2 v0.2.20 [INFO] [stderr] Checking rand v0.3.23 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Checking ordered-float v1.1.1 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking regex v1.4.3 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Checking bio-types v0.10.0 [INFO] [stderr] Checking bstr v0.2.15 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking serde_json v1.0.62 [INFO] [stderr] Checking csv v1.1.5 [INFO] [stderr] Checking fastq-count v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/main.rs:14:43 [INFO] [stdout] | [INFO] [stdout] 14 | fn get_fastq_reader(path: &String) -> Box<::std::io::Read> { [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: use `dyn`: `dyn (::std::io::Read)` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/main.rs:14:43 [INFO] [stdout] | [INFO] [stdout] 14 | fn get_fastq_reader(path: &String) -> Box<::std::io::Read> { [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: use `dyn`: `dyn (::std::io::Read)` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 16s [INFO] running `Command { std: "docker" "inspect" "143a8c1a76ee5eb3c5e4fabed9c72c78922e2c7b8499f58e607c3ef361beb2af", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "143a8c1a76ee5eb3c5e4fabed9c72c78922e2c7b8499f58e607c3ef361beb2af", kill_on_drop: false }` [INFO] [stdout] 143a8c1a76ee5eb3c5e4fabed9c72c78922e2c7b8499f58e607c3ef361beb2af