[INFO] fetching crate d4 0.1.16... [INFO] checking d4-0.1.16 against master#9503ea19edbf01b9435e80e17d60ce1b88390116 for pr-81782 [INFO] extracting crate d4 0.1.16 into /workspace/builds/worker-14/source [INFO] validating manifest of crates.io crate d4 0.1.16 on toolchain 9503ea19edbf01b9435e80e17d60ce1b88390116 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4 0.1.16 [INFO] finished tweaking crates.io crate d4 0.1.16 [INFO] tweaked toml for crates.io crate d4 0.1.16 written to /workspace/builds/worker-14/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 77e50f3764464bd2c08db23b15d4dbd7e6445448cc4dc8d734157a94c20c8104 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "77e50f3764464bd2c08db23b15d4dbd7e6445448cc4dc8d734157a94c20c8104", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "77e50f3764464bd2c08db23b15d4dbd7e6445448cc4dc8d734157a94c20c8104", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "77e50f3764464bd2c08db23b15d4dbd7e6445448cc4dc8d734157a94c20c8104", kill_on_drop: false }` [INFO] [stdout] 77e50f3764464bd2c08db23b15d4dbd7e6445448cc4dc8d734157a94c20c8104 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 289aca993acff15298f4a9e0c205a07e02d8267bd735c58703aee7adba552545 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "289aca993acff15298f4a9e0c205a07e02d8267bd735c58703aee7adba552545", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.86 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling once_cell v1.7.0 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling serde v1.0.123 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Checking adler v0.2.3 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde_json v1.0.62 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling thread_local v1.1.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling serde_derive v1.0.123 [INFO] [stderr] Compiling crossbeam-utils v0.8.2 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling miniz_oxide v0.4.3 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling clang-sys v1.1.1 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.2 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling regex v1.4.3 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking d4-framefile v0.1.16 [INFO] [stderr] Compiling d4-hts v0.1.16 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.1.16` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-23bdef223fc20791/build-script-build` (exit code: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-564b39f22a8e0cc8/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-564b39f22a8e0cc8/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.16/build.rs:34:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55b151e81fe0 - std::backtrace_rs::backtrace::libunwind::trace::hb4de9797f80b7b8c [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55b151e81fe0 - std::backtrace_rs::backtrace::trace_unsynchronized::h59566d0bd20efff7 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55b151e81fe0 - std::sys_common::backtrace::_print_fmt::hcfa5ce6be50275d4 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55b151e81fe0 - ::fmt::hd8c307a38b9bab04 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55b151ea530c - core::fmt::write::h3868db8542c90941 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/core/src/fmt/mod.rs:1096:17 [INFO] [stderr] 5: 0x55b151e7e282 - std::io::Write::write_fmt::hab90295d5a0f197d [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/io/mod.rs:1568:15 [INFO] [stderr] 6: 0x55b151e84565 - std::sys_common::backtrace::_print::h19224910b8700cf1 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55b151e84565 - std::sys_common::backtrace::print::h25dedfa68c5fb84a [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55b151e84565 - std::panicking::default_hook::{{closure}}::h12c5765653a72a42 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55b151e84013 - std::panicking::default_hook::he65cee71c4209f0c [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55b151e84d01 - std::panicking::rust_panic_with_hook::h01a674d863fe0d8a [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x55b151e84817 - std::panicking::begin_panic_handler::{{closure}}::h9b9fecf185178864 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x55b151e8247c - std::sys_common::backtrace::__rust_end_short_backtrace::h57be46a42dc7f24b [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55b151e847a9 - rust_begin_unwind [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x55b151ea39f1 - core::panicking::panic_fmt::h20225113c4a2f8fd [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55b151ea393d - core::panicking::panic::h35b77276aa4b0c12 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55b1518c29ac - build_script_build::build_own_htslib::hd0b4568a62af2844 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.16/build.rs:34:5 [INFO] [stderr] 17: 0x55b1518c2eb4 - build_script_build::main::h4afa570c95242e1c [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.16/build.rs:66:9 [INFO] [stderr] 18: 0x55b1518c3abb - core::ops::function::FnOnce::call_once::hf4961e5f01abfe23 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55b1518c3e1e - std::sys_common::backtrace::__rust_begin_short_backtrace::he4be53d8bd2a8d0d [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55b1518c4701 - std::rt::lang_start::{{closure}}::h7201add91babbf1d [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/rt.rs:66:18 [INFO] [stderr] 21: 0x55b151e85217 - core::ops::function::impls:: for &F>::call_once::h2c4fd7d4128112a8 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55b151e85217 - std::panicking::try::do_call::h41fb7dbbbe7bece6 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:379:40 [INFO] [stderr] 23: 0x55b151e85217 - std::panicking::try::hd38008ccba72bce1 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panicking.rs:343:19 [INFO] [stderr] 24: 0x55b151e85217 - std::panic::catch_unwind::h057e765cd60f2d13 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/panic.rs:431:14 [INFO] [stderr] 25: 0x55b151e85217 - std::rt::lang_start_internal::hdb9d0b9d2cdcda8b [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/rt.rs:51:25 [INFO] [stderr] 26: 0x55b1518c46d7 - std::rt::lang_start::h209e2dcece0c6196 [INFO] [stderr] at /rustc/9503ea19edbf01b9435e80e17d60ce1b88390116/library/std/src/rt.rs:65:5 [INFO] [stderr] 27: 0x55b1518c34da - main [INFO] [stderr] 28: 0x7f5228d900b3 - __libc_start_main [INFO] [stderr] 29: 0x55b1518c20be - _start [INFO] [stderr] 30: 0x0 - [INFO] running `Command { std: "docker" "inspect" "289aca993acff15298f4a9e0c205a07e02d8267bd735c58703aee7adba552545", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "289aca993acff15298f4a9e0c205a07e02d8267bd735c58703aee7adba552545", kill_on_drop: false }` [INFO] [stdout] 289aca993acff15298f4a9e0c205a07e02d8267bd735c58703aee7adba552545