[INFO] cloning repository https://github.com/brainstorm/htsget-aws
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/brainstorm/htsget-aws" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-aws", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-aws'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 5e1753d5b67c191c5b9dd3dbd3f747ca629e37ad
[INFO] checking brainstorm/htsget-aws against master#9503ea19edbf01b9435e80e17d60ce1b88390116 for pr-81782
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-aws" "/workspace/builds/worker-0/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/brainstorm/htsget-aws on toolchain 9503ea19edbf01b9435e80e17d60ce1b88390116
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] removed /workspace/builds/worker-0/source/.cargo/config
[INFO] started tweaking git repo https://github.com/brainstorm/htsget-aws
[INFO] finished tweaking git repo https://github.com/brainstorm/htsget-aws
[INFO] tweaked toml for git repo https://github.com/brainstorm/htsget-aws written to /workspace/builds/worker-0/source/Cargo.toml
[INFO] crate git repo https://github.com/brainstorm/htsget-aws already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr] error: the lock file /workspace/builds/worker-0/source/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag.
[INFO] the lockfile is outdated, regenerating it
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating git repository `https://github.com/brainstorm/bio-index-formats`
[INFO] [stderr]     Updating git repository `https://github.com/awslabs/aws-lambda-rust-runtime`
[INFO] [stderr]     Updating git repository `https://github.com/rusoto/rusoto`
[INFO] [stderr]     Updating git repository `https://github.com/brainstorm/rust-htslib.git`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e4299cec7b482312d0429ddd85dd3f199f741056c57612b7e444e6c364b6dc40
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "e4299cec7b482312d0429ddd85dd3f199f741056c57612b7e444e6c364b6dc40", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e4299cec7b482312d0429ddd85dd3f199f741056c57612b7e444e6c364b6dc40", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e4299cec7b482312d0429ddd85dd3f199f741056c57612b7e444e6c364b6dc40", kill_on_drop: false }`
[INFO] [stdout] e4299cec7b482312d0429ddd85dd3f199f741056c57612b7e444e6c364b6dc40
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:f2f6bcd4b43ebee4e173f653a26493129bdb64017c85f916b780ca7fbdbaa79d" "/opt/rustwide/cargo-home/bin/cargo" "+9503ea19edbf01b9435e80e17d60ce1b88390116" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 7541bf0f86b396639574a42b2bb7695d4773e4d5efe7e64c2820eb530582ba96
[INFO] running `Command { std: "docker" "start" "-a" "7541bf0f86b396639574a42b2bb7695d4773e4d5efe7e64c2820eb530582ba96", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.86
[INFO] [stderr]    Compiling syn v1.0.60
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling value-bag v1.0.0-alpha.6
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]     Checking lazy_static v1.4.0
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[INFO] [stderr]     Checking futures v0.1.31
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]     Checking futures-sink v0.3.13
[INFO] [stderr]     Checking either v1.6.1
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[INFO] [stderr]     Checking try-lock v0.2.3
[INFO] [stderr]    Compiling serde_json v1.0.63
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[INFO] [stderr]    Compiling syn v0.15.44
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[INFO] [stderr]     Checking base64 v0.13.0
[INFO] [stderr]    Compiling ucd-trie v0.1.3
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[INFO] [stderr]    Compiling byteorder v1.4.2
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[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling tiny-keccak v2.0.2
[INFO] [stderr]    Compiling siphasher v0.3.3
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling new_debug_unreachable v1.0.4
[INFO] [stderr]     Checking object v0.23.0
[INFO] [stderr]    Compiling signal-hook v0.3.6
[INFO] [stderr]     Checking async-task v4.0.3
[INFO] [stderr]    Compiling precomputed-hash v0.1.1
[INFO] [stderr]     Checking rustc-demangle v0.1.18
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling fixedbitset v0.2.0
[INFO] [stderr]     Checking opaque-debug v0.3.0
[INFO] [stderr]    Compiling curl v0.4.34
[INFO] [stderr]     Checking atomic-waker v1.0.0
[INFO] [stderr]    Compiling encoding_rs v0.8.28
[INFO] [stderr]    Compiling pico-args v0.3.4
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[INFO] [stderr]    Compiling diff v0.1.12
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[INFO] [stderr]    Compiling lexical-core v0.7.5
[INFO] [stderr]     Checking cpuid-bool v0.1.2
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[INFO] [stderr]    Compiling unicode-segmentation v1.7.1
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[INFO] [stderr]     Checking hex v0.4.2
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[INFO] [stderr]     Checking futures-core-preview v0.3.0-alpha.19
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[INFO] [stderr]     Checking newtype_derive v0.1.4
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[INFO] [stderr]     Checking futures-sink-preview v0.3.0-alpha.19
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking levenshtein v1.0.5
[INFO] [stderr]     Checking bytes v0.6.0
[INFO] [stderr]    Compiling generic-array v0.14.4
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]     Checking tracing-core v0.1.17
[INFO] [stderr]     Checking sharded-slab v0.1.1
[INFO] [stderr]     Checking lock_api v0.4.2
[INFO] [stderr]     Checking futures-channel v0.3.13
[INFO] [stderr]     Checking thread_local v1.1.3
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling typenum v1.12.0
[INFO] [stderr]     Checking qstring v0.7.2
[INFO] [stderr]     Checking tinyvec v1.1.1
[INFO] [stderr]     Checking http v0.2.3
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]     Checking form_urlencoded v1.0.1
[INFO] [stderr]     Checking concurrent-queue v1.2.2
[INFO] [stderr]     Checking async-mutex v1.4.0
[INFO] [stderr]     Checking async-lock v2.3.0
[INFO] [stderr]    Compiling pest v2.1.3
[INFO] [stderr]    Compiling indexmap v1.6.1
[INFO] [stderr]    Compiling crossbeam-utils v0.7.2
[INFO] [stderr]    Compiling tokio v1.2.0
[INFO] [stderr]    Compiling memoffset v0.5.6
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling crossbeam-epoch v0.8.2
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling crossbeam-utils v0.8.3
[INFO] [stderr]    Compiling phf_shared v0.8.0
[INFO] [stderr]    Compiling itertools v0.9.0
[INFO] [stderr]    Compiling bit-set v0.5.2
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking tokio-sync v0.1.8
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]    Compiling heck v0.3.2
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[INFO] [stderr]     Checking sluice v0.5.4
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]     Checking async-channel v1.6.1
[INFO] [stderr]     Checking unicode-normalization v0.1.17
[INFO] [stderr]    Compiling string_cache v0.8.1
[INFO] [stderr]     Checking smallvec v0.6.14
[INFO] [stderr]     Checking addr2line v0.14.1
[INFO] [stderr]     Checking tracing-subscriber v0.2.16
[INFO] [stderr]     Checking flume v0.9.2
[INFO] [stderr]    Compiling semver-parser v0.10.2
[INFO] [stderr]     Checking futures-lite v1.11.3
[INFO] [stderr]     Checking aho-corasick v0.7.15
[INFO] [stderr]     Checking clap v2.33.3
[INFO] [stderr]    Compiling parking_lot_core v0.6.2
[INFO] [stderr]    Compiling parking_lot v0.9.0
[INFO] [stderr]    Compiling hyper v0.12.36
[INFO] [stderr]    Compiling lambda_runtime_core v0.1.2
[INFO] [stderr]     Checking num_cpus v1.13.0
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[INFO] [stderr]     Checking signal-hook-registry v1.3.0
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[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]    Compiling jobserver v0.1.21
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[INFO] [stderr]    Compiling semver v0.11.0
[INFO] [stderr]     Checking tokio-executor v0.1.10
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[INFO] [stderr]    Compiling petgraph v0.5.1
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[INFO] [stderr]     Checking crypto-mac v0.10.0
[INFO] [stderr]     Checking async-executor v1.4.0
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[INFO] [stderr]     Checking dirs-next v2.0.0
[INFO] [stderr]     Checking nb-connect v1.0.3
[INFO] [stderr]    Compiling term v0.5.2
[INFO] [stderr]    Compiling cc v1.0.67
[INFO] [stderr]     Checking backtrace v0.3.56
[INFO] [stderr]     Checking tokio-current-thread v0.1.7
[INFO] [stderr]     Checking tokio-timer v0.2.13
[INFO] [stderr]    Compiling rustc_version v0.3.3
[INFO] [stderr]     Checking crossbeam-deque v0.7.3
[INFO] [stderr]     Checking md-5 v0.9.1
[INFO] [stderr]     Checking sha2 v0.9.3
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[INFO] [stderr]     Checking string v0.2.1
[INFO] [stderr]     Checking tokio-buf v0.1.1
[INFO] [stderr]    Compiling ascii-canvas v2.0.0
[INFO] [stderr]     Checking lalrpop-util v0.19.4
[INFO] [stderr]    Compiling openssl-src v111.14.0+1.1.1j
[INFO] [stderr]    Compiling rusoto_core v0.46.0 (https://github.com/rusoto/rusoto?branch=master#31cf1506)
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling openssl-sys v0.9.60
[INFO] [stderr]    Compiling libnghttp2-sys v0.1.6+1.43.0
[INFO] [stderr]    Compiling curl-sys v0.4.40+curl-7.75.0
[INFO] [stderr]    Compiling ring v0.16.20
[INFO] [stderr]    Compiling libdeflate-sys v0.5.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.10+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling hts-sys v1.10.3 (https://github.com/brainstorm/rust-htslib.git?branch=latest_htslib#45471c44)
[INFO] [stderr]    Compiling synstructure v0.10.2
[INFO] [stderr]     Checking bio_index_formats v0.1.2 (https://github.com/brainstorm/bio-index-formats#51fffdac)
[INFO] [stderr]     Checking http-body v0.1.0
[INFO] [stderr]    Compiling lambda_runtime_errors_derive v0.1.1
[INFO] [stderr]    Compiling synstructure v0.12.4
[INFO] [stderr]     Checking sct v0.6.0
[INFO] [stderr]     Checking webpki v0.21.4
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[INFO] [stderr]    Compiling ctor v0.1.19
[INFO] [stderr]    Compiling serde_derive v1.0.123
[INFO] [stderr]    Compiling tracing-attributes v0.1.13
[INFO] [stderr]    Compiling tokio-macros v1.1.0
[INFO] [stderr]    Compiling pin-project-internal v1.0.5
[INFO] [stderr]    Compiling futures-macro v0.3.13
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling async-trait v0.1.42
[INFO] [stderr]    Compiling async-stream-impl v0.3.0
[INFO] [stderr]    Compiling strum_macros v0.20.1
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling extend v0.1.2
[INFO] [stderr]    Compiling thiserror-impl v1.0.24
[INFO] [stderr]    Compiling tokio-macros v0.2.6
[INFO] [stderr]     Checking futures-util v0.3.13
[INFO] [stderr]     Checking failure v0.1.8
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[INFO] [stderr]     Checking lambda_runtime v0.2.1
[INFO] [stderr]     Checking hyper v0.14.4
[INFO] [stderr]     Checking rusoto_credential v0.46.0 (https://github.com/rusoto/rusoto?branch=master#31cf1506)
[INFO] [stderr]     Checking hyper-rustls v0.22.1
[INFO] [stderr]     Checking lambda v0.1.0 (https://github.com/awslabs/aws-lambda-rust-runtime#ba696878)
[INFO] [stderr]     Checking lambda_http v0.2.0-beta.1 (https://github.com/awslabs/aws-lambda-rust-runtime#ba696878)
[INFO] [stderr]     Checking rusoto_signature v0.46.0 (https://github.com/rusoto/rusoto?branch=master#31cf1506)
[INFO] [stderr]     Checking rusoto_s3 v0.46.0 (https://github.com/rusoto/rusoto?branch=master#31cf1506)
[INFO] [stderr]     Checking rust-htslib v0.32.1-alpha.0 (https://github.com/brainstorm/rust-htslib.git?branch=latest_htslib#45471c44)
[INFO] [stderr]    Compiling basic-cookies v0.1.4
[INFO] [stderr]     Checking httpmock v0.5.5
[INFO] [stderr]     Checking htsget-rs v0.1.0 (/opt/rustwide/workdir/htsget-rs)
[INFO] [stdout] error[E0599]: the method `read_to_end` exists for opaque type `impl Send+tokio::io::async_read::AsyncRead`, but its trait bounds were not satisfied
[INFO] [stdout]    --> htsget-rs/src/lib.rs:128:28
[INFO] [stdout]     |
[INFO] [stdout] 128 |                           .read_to_end(&mut content).await.unwrap();
[INFO] [stdout]     |                            ^^^^^^^^^^^ method cannot be called on `impl Send+tokio::io::async_read::AsyncRead` due to unsatisfied trait bounds
[INFO] [stdout]     |
[INFO] [stdout]     = note: the following trait bounds were not satisfied:
[INFO] [stdout]             `impl Send+tokio::io::async_read::AsyncRead: AsyncRead`
[INFO] [stdout]             which is required by `impl Send+tokio::io::async_read::AsyncRead: AsyncReadExt`
[INFO] [stdout]     = help: items from traits can only be used if the trait is in scope
[INFO] [stdout] help: the following trait is implemented but not in scope; perhaps add a `use` for it:
[INFO] [stdout]     |
[INFO] [stdout] 1   | use tokio::io::util::async_read_ext::AsyncReadExt;
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `tokio::io::AsyncReadExt`
[INFO] [stdout]   --> htsget-rs/src/lib.rs:11:5
[INFO] [stdout]    |
[INFO] [stdout] 11 | use tokio::io::AsyncReadExt;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error; 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0599`.
[INFO] [stdout] 
[INFO] [stdout] error[E0599]: the method `read_to_end` exists for opaque type `impl Send+tokio::io::async_read::AsyncRead`, but its trait bounds were not satisfied
[INFO] [stdout]    --> htsget-rs/src/lib.rs:128:28
[INFO] [stdout]     |
[INFO] [stdout] 128 |                           .read_to_end(&mut content).await.unwrap();
[INFO] [stdout]     |                            ^^^^^^^^^^^ method cannot be called on `impl Send+tokio::io::async_read::AsyncRead` due to unsatisfied trait bounds
[INFO] [stdout]     |
[INFO] [stdout]     = note: the following trait bounds were not satisfied:
[INFO] [stdout]             `impl Send+tokio::io::async_read::AsyncRead: AsyncRead`
[INFO] [stdout]             which is required by `impl Send+tokio::io::async_read::AsyncRead: AsyncReadExt`
[INFO] [stdout]     = help: items from traits can only be used if the trait is in scope
[INFO] [stdout] help: the following trait is implemented but not in scope; perhaps add a `use` for it:
[INFO] [stdout]     |
[INFO] [stdout] 1   | use tokio::io::util::async_read_ext::AsyncReadExt;
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `htsget-rs`
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] warning: unused import: `tokio::io::AsyncReadExt`
[INFO] [stdout]   --> htsget-rs/src/lib.rs:11:5
[INFO] [stdout]    |
[INFO] [stdout] 11 | use tokio::io::AsyncReadExt;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error; 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0599`.
[INFO] [stdout] 
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "7541bf0f86b396639574a42b2bb7695d4773e4d5efe7e64c2820eb530582ba96", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7541bf0f86b396639574a42b2bb7695d4773e4d5efe7e64c2820eb530582ba96", kill_on_drop: false }`
[INFO] [stdout] 7541bf0f86b396639574a42b2bb7695d4773e4d5efe7e64c2820eb530582ba96