[INFO] cloning repository https://github.com/IMTMarburg/mbf_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/IMTMarburg/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 833f12b2b02cd83ac88c9bec81cebb32522d3871
[INFO] checking IMTMarburg/mbf_bam against try#3d9fdbff4f377de96b3a51174e7a64086bee9a5c for pr-81477
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-3/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain 3d9fdbff4f377de96b3a51174e7a64086bee9a5c
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3d9fdbff4f377de96b3a51174e7a64086bee9a5c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam
[INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam
[INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-3/source/Cargo.toml
[INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3d9fdbff4f377de96b3a51174e7a64086bee9a5c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bytecount v0.3.2
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded ndarray v0.12.1
[INFO] [stderr]   Downloaded inventory-impl v0.1.9
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded inventory v0.1.9
[INFO] [stderr]   Downloaded bv v0.10.0
[INFO] [stderr]   Downloaded bio-types v0.7.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded bio-types v0.5.1
[INFO] [stderr]   Downloaded pyo3-derive-backend v0.12.1
[INFO] [stderr]   Downloaded pyo3cls v0.12.1
[INFO] [stderr]   Downloaded indoc-impl v0.3.6
[INFO] [stderr]   Downloaded indoc v0.3.6
[INFO] [stderr]   Downloaded statrs v0.9.0
[INFO] [stderr]   Downloaded curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]   Downloaded fs-utils v1.1.0
[INFO] [stderr]   Downloaded pyo3 v0.12.1
[INFO] [stderr]   Downloaded rust-htslib v0.32.0
[INFO] [stderr]   Downloaded csv v1.0.6
[INFO] [stderr]   Downloaded lzma-sys v0.1.17
[INFO] [stderr]   Downloaded hts-sys v1.10.3
[INFO] [stderr]   Downloaded bio v0.25.0
[INFO] [stderr]   Downloaded ctor v0.1.8
[INFO] [stderr]   Downloaded openssl-src v111.12.0+1.1.1h
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+3d9fdbff4f377de96b3a51174e7a64086bee9a5c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 74a555101d417f62f66261ba8a66db5254e39fb62b9a55b2e0537867df530ddc
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "74a555101d417f62f66261ba8a66db5254e39fb62b9a55b2e0537867df530ddc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "74a555101d417f62f66261ba8a66db5254e39fb62b9a55b2e0537867df530ddc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "74a555101d417f62f66261ba8a66db5254e39fb62b9a55b2e0537867df530ddc", kill_on_drop: false }`
[INFO] [stdout] 74a555101d417f62f66261ba8a66db5254e39fb62b9a55b2e0537867df530ddc
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+3d9fdbff4f377de96b3a51174e7a64086bee9a5c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] f1e28375bc7e57041a91095a87c633ed2bdcd7739af8c2dd885ce1b15ee3f759
[INFO] running `Command { std: "docker" "start" "-a" "f1e28375bc7e57041a91095a87c633ed2bdcd7739af8c2dd885ce1b15ee3f759", kill_on_drop: false }`
[INFO] [stderr]    Compiling arrayvec v0.4.10
[INFO] [stderr]    Compiling rayon-core v1.4.1
[INFO] [stderr]    Compiling nodrop v0.1.13
[INFO] [stderr]    Compiling either v1.5.2
[INFO] [stderr]    Compiling syn v0.15.30
[INFO] [stderr]    Compiling proc-macro2 v1.0.6
[INFO] [stderr]    Compiling syn v1.0.11
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling ryu v0.2.7
[INFO] [stderr]    Compiling autocfg v0.1.2
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling inventory v0.1.9
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking itoa v0.4.3
[INFO] [stderr]    Compiling pyo3 v0.12.1
[INFO] [stderr]    Compiling bio v0.25.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking fnv v1.0.6
[INFO] [stderr]    Compiling crossbeam-utils v0.2.2
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:20:87
[INFO] [stdout]     |
[INFO] [stdout] 20  |       ($fmt: literal $(, $args: expr)+) => { return Err(format!($fmt $(,$args)+).into()); };
[INFO] [stdout]     |                                                                                         ^
[INFO] [stdout] ...
[INFO] [stdout] 136 |               None => bail!(
[INFO] [stdout]     |  _____________________-
[INFO] [stdout] 137 | |                 "Must provide {} environment variable when cross-compiling",
[INFO] [stdout] 138 | |                 var
[INFO] [stdout] 139 | |             ),
[INFO] [stdout]     | |_____________- in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:20:87
[INFO] [stdout]     |
[INFO] [stdout] 20  |     ($fmt: literal $(, $args: expr)+) => { return Err(format!($fmt $(,$args)+).into()); };
[INFO] [stdout]     |                                                                                       ^
[INFO] [stdout] ...
[INFO] [stdout] 143 |             bail!("{} value of {:?} does not exist", var, path)
[INFO] [stdout]     |             --------------------------------------------------- in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:20:87
[INFO] [stdout]     |
[INFO] [stdout] 20  |       ($fmt: literal $(, $args: expr)+) => { return Err(format!($fmt $(,$args)+).into()); };
[INFO] [stdout]     |                                                                                         ^
[INFO] [stdout] ...
[INFO] [stdout] 312 | /         bail!(
[INFO] [stdout] 313 | |             "Detected multiple possible python versions, please set the PYO3_PYTHON_VERSION \
[INFO] [stdout] 314 | |             variable to the wanted version on your system\nsysconfigdata paths = {:?}",
[INFO] [stdout] 315 | |             sysconfig_paths
[INFO] [stdout] 316 | |         )
[INFO] [stdout]     | |_________- in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:19:46
[INFO] [stdout]     |
[INFO] [stdout] 19  |     ($msg: expr) => { return Err($msg.into()); };
[INFO] [stdout]     |                                              ^
[INFO] [stdout] ...
[INFO] [stdout] 553 |         Ok(ref ok) if !ok.status.success() => bail!("Python script failed: {}"),
[INFO] [stdout]     |                                               --------------------------------- in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:20:87
[INFO] [stdout]     |
[INFO] [stdout] 20  |     ($fmt: literal $(, $args: expr)+) => { return Err(format!($fmt $(,$args)+).into()); };
[INFO] [stdout]     |                                                                                       ^
[INFO] [stdout] ...
[INFO] [stdout] 623 |         other => bail!("unknown linkmodel {}", other),
[INFO] [stdout]     |                  ------------------------------------ in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:20:87
[INFO] [stdout]     |
[INFO] [stdout] 20  |     ($fmt: literal $(, $args: expr)+) => { return Err(format!($fmt $(,$args)+).into()); };
[INFO] [stdout]     |                                                                                       ^
[INFO] [stdout] ...
[INFO] [stdout] 788 |         x => bail!("unexpected Rust target pointer width: {}", x),
[INFO] [stdout]     |              ---------------------------------------------------- in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: Trailing semicolon in macro
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.12.1/build.rs:20:87
[INFO] [stdout]     |
[INFO] [stdout] 20  |     ($fmt: literal $(, $args: expr)+) => { return Err(format!($fmt $(,$args)+).into()); };
[INFO] [stdout]     |                                                                                       ^
[INFO] [stdout] ...
[INFO] [stdout] 804 |         Some(n) => bail!("unexpected Python calcsize_pointer value: {}", n),
[INFO] [stdout]     |                    -------------------------------------------------------- in this macro invocation
[INFO] [stdout]     |
[INFO] [stdout]     = note: this error originates in the macro `bail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling fs-utils v1.1.0
[INFO] [stderr]     Checking instant v0.1.7
[INFO] [stderr]     Checking unicode-normalization v0.1.8
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stdout] error: aborting due to 7 previous errors
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `pyo3`
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "f1e28375bc7e57041a91095a87c633ed2bdcd7739af8c2dd885ce1b15ee3f759", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f1e28375bc7e57041a91095a87c633ed2bdcd7739af8c2dd885ce1b15ee3f759", kill_on_drop: false }`
[INFO] [stdout] f1e28375bc7e57041a91095a87c633ed2bdcd7739af8c2dd885ce1b15ee3f759