[INFO] fetching crate mwa_hyperbeam 0.3.4... [INFO] checking mwa_hyperbeam-0.3.4 against master#90442458ac46b1d5eed752c316da25450f67285b for pr-81477 [INFO] extracting crate mwa_hyperbeam 0.3.4 into /workspace/builds/worker-1/source [INFO] validating manifest of crates.io crate mwa_hyperbeam 0.3.4 on toolchain 90442458ac46b1d5eed752c316da25450f67285b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-1/source/.cargo/config.toml [INFO] started tweaking crates.io crate mwa_hyperbeam 0.3.4 [INFO] finished tweaking crates.io crate mwa_hyperbeam 0.3.4 [INFO] tweaked toml for crates.io crate mwa_hyperbeam 0.3.4 written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate crates.io crate mwa_hyperbeam 0.3.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 3663d630b8849568e34fac7e0104d9b1e218a04d97e075a109309dffae25f1d7 [INFO] running `Command { std: "docker" "start" "-a" "3663d630b8849568e34fac7e0104d9b1e218a04d97e075a109309dffae25f1d7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3663d630b8849568e34fac7e0104d9b1e218a04d97e075a109309dffae25f1d7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3663d630b8849568e34fac7e0104d9b1e218a04d97e075a109309dffae25f1d7", kill_on_drop: false }` [INFO] [stdout] 3663d630b8849568e34fac7e0104d9b1e218a04d97e075a109309dffae25f1d7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b862cb8ba2d461fd74b861855ba7cced98f0f12fce2be6d691a3ff192c5987fb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b862cb8ba2d461fd74b861855ba7cced98f0f12fce2be6d691a3ff192c5987fb", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling unicode-segmentation v1.7.1 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling cbindgen v0.19.0 [INFO] [stderr] Checking smallvec v1.6.1 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking plotters-backend v0.3.0 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Compiling hdf5 v0.7.1 [INFO] [stderr] Checking half v1.7.1 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking oorandom v11.1.3 [INFO] [stderr] Compiling libloading v0.6.7 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking instant v0.1.9 [INFO] [stderr] Checking matrixmultiply v0.2.4 [INFO] [stderr] Checking lock_api v0.4.4 [INFO] [stderr] Checking walkdir v2.3.2 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Compiling semver-parser v0.10.2 [INFO] [stderr] Checking crossbeam-utils v0.8.5 [INFO] [stderr] Checking plotters-svg v0.3.0 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking parking_lot_core v0.8.3 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Checking hdf5-types v0.7.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling indexmap v1.6.2 [INFO] [stderr] Compiling num-bigint v0.3.2 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Checking dashmap v4.0.2 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling semver v0.11.0 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Checking parking_lot v0.11.1 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rustc_version v0.3.3 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling cast v0.2.6 [INFO] [stderr] Checking rayon-core v1.9.1 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking plotters v0.3.1 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Checking criterion-plot v0.4.3 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Checking num v0.3.1 [INFO] [stderr] Compiling hdf5-sys v0.7.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-5d103b5c69600da3/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55a51efca8d0 - std::backtrace_rs::backtrace::libunwind::trace::h4e80f45db05e9df0 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55a51efca8d0 - std::backtrace_rs::backtrace::trace_unsynchronized::h9db62a3d3587f6c3 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55a51efca8d0 - std::sys_common::backtrace::_print_fmt::h2fafbe52c9090591 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55a51efca8d0 - ::fmt::h7d41ae04358c516d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55a51efe90fc - core::fmt::write::h968e6400cbc51d6a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x55a51efc7ce5 - std::io::Write::write_fmt::h2eaa97c6f8c9e829 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/io/mod.rs:1642:15 [INFO] [stderr] 6: 0x55a51efcc93b - std::sys_common::backtrace::_print::h601a6bc581f240d5 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55a51efcc93b - std::sys_common::backtrace::print::h8b96e15ba64b8e64 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55a51efcc93b - std::panicking::default_hook::{{closure}}::h94fa9d2f08c20620 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55a51efcc411 - std::panicking::default_hook::h6d463f5a2e9d9986 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55a51efcd004 - std::panicking::rust_panic_with_hook::h1e953652a338573e [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55a51ef0d7a3 - std::panicking::begin_panic::{{closure}}::h7d07d5c23468f3f7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x55a51ef0d629 - std::sys_common::backtrace::__rust_end_short_backtrace::h4165981b91f2a5b9 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55a51ef0d6d9 - std::panicking::begin_panic::hc9036d5af842be26 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x55a51edc5ea7 - build_script_build::LibrarySearcher::try_locate_hdf5_library::ha6297c61cb0ac90e [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] 15: 0x55a51edc76cb - build_script_build::main::h5671c0726ba2da7c [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:647:9 [INFO] [stderr] 16: 0x55a51edcb3db - core::ops::function::FnOnce::call_once::h6c1d24f30c62efe7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55a51edd1a3e - std::sys_common::backtrace::__rust_begin_short_backtrace::h41fc88d1adbb1a55 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55a51edcff91 - std::rt::lang_start::{{closure}}::h682ceab2dff4e2c1 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x55a51efcd50a - core::ops::function::impls:: for &F>::call_once::hccffb0872f46e99d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55a51efcd50a - std::panicking::try::do_call::h814e0410256bb9f2 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x55a51efcd50a - std::panicking::try::h97cbec2057cc2c0d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x55a51efcd50a - std::panic::catch_unwind::h964f35f6fa41d1d7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x55a51efcd50a - std::rt::lang_start_internal::{{closure}}::hb97931cf27086d8b [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x55a51efcd50a - std::panicking::try::do_call::hf0d61be342e8297a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 25: 0x55a51efcd50a - std::panicking::try::h6b40eeb22db57b23 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 26: 0x55a51efcd50a - std::panic::catch_unwind::h425af95fffdb0cf5 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panic.rs:434:14 [INFO] [stderr] 27: 0x55a51efcd50a - std::rt::lang_start_internal::h21e355575f2fedc7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x55a51edcff60 - std::rt::lang_start::h6f15396c50226d77 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x55a51edc8bbc - main [INFO] [stderr] 30: 0x7fb4fbd510b3 - __libc_start_main [INFO] [stderr] 31: 0x55a51edc0efe - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "b862cb8ba2d461fd74b861855ba7cced98f0f12fce2be6d691a3ff192c5987fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b862cb8ba2d461fd74b861855ba7cced98f0f12fce2be6d691a3ff192c5987fb", kill_on_drop: false }` [INFO] [stdout] b862cb8ba2d461fd74b861855ba7cced98f0f12fce2be6d691a3ff192c5987fb