[INFO] fetching crate d4 0.2.17... [INFO] checking d4-0.2.17 against master#90442458ac46b1d5eed752c316da25450f67285b for pr-81477 [INFO] extracting crate d4 0.2.17 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate d4 0.2.17 on toolchain 90442458ac46b1d5eed752c316da25450f67285b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4 0.2.17 [INFO] finished tweaking crates.io crate d4 0.2.17 [INFO] tweaked toml for crates.io crate d4 0.2.17 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 835884354bf2d598b0bc084b4577e9126d71b868ed0ae8f41a0bf39666984e72 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "835884354bf2d598b0bc084b4577e9126d71b868ed0ae8f41a0bf39666984e72", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "835884354bf2d598b0bc084b4577e9126d71b868ed0ae8f41a0bf39666984e72", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "835884354bf2d598b0bc084b4577e9126d71b868ed0ae8f41a0bf39666984e72", kill_on_drop: false }` [INFO] [stdout] 835884354bf2d598b0bc084b4577e9126d71b868ed0ae8f41a0bf39666984e72 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1578f5c46a5bd8c7e1a494d791df89cde4a8ddad12466e3bc6e1860419ed9bb9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1578f5c46a5bd8c7e1a494d791df89cde4a8ddad12466e3bc6e1860419ed9bb9", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling serde v1.0.126 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Compiling serde_derive v1.0.126 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling libc v0.2.97 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Checking d4-framefile v0.2.17 [INFO] [stderr] Compiling d4-hts v0.2.17 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.17` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-86f5199503be4139/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-e897b6f133db684e/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-e897b6f133db684e/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.17/build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55e18e66fef0 - std::backtrace_rs::backtrace::libunwind::trace::h4e80f45db05e9df0 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55e18e66fef0 - std::backtrace_rs::backtrace::trace_unsynchronized::h9db62a3d3587f6c3 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55e18e66fef0 - std::sys_common::backtrace::_print_fmt::h2fafbe52c9090591 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55e18e66fef0 - ::fmt::h7d41ae04358c516d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55e18e69502c - core::fmt::write::h968e6400cbc51d6a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x55e18e66cc85 - std::io::Write::write_fmt::h2eaa97c6f8c9e829 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/io/mod.rs:1642:15 [INFO] [stderr] 6: 0x55e18e6723ab - std::sys_common::backtrace::_print::h601a6bc581f240d5 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55e18e6723ab - std::sys_common::backtrace::print::h8b96e15ba64b8e64 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55e18e6723ab - std::panicking::default_hook::{{closure}}::h94fa9d2f08c20620 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55e18e671e81 - std::panicking::default_hook::h6d463f5a2e9d9986 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55e18e672a74 - std::panicking::rust_panic_with_hook::h1e953652a338573e [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55e18e672527 - std::panicking::begin_panic_handler::{{closure}}::h78bf2fec525c238a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x55e18e6703ec - std::sys_common::backtrace::__rust_end_short_backtrace::h651eb6282e4ea6b2 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55e18e6724b9 - rust_begin_unwind [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x55e18e11d921 - core::panicking::panic_fmt::hdfd0360cedf2d908 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55e18e11d86d - core::panicking::panic::h607cffdabb38afd3 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55e18e11ea2d - build_script_build::build_own_htslib::hffb509e88d286f73 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.17/build.rs:33:5 [INFO] [stderr] 17: 0x55e18e11ee8e - build_script_build::main::h108b1fc84c666dda [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.2.17/build.rs:65:9 [INFO] [stderr] 18: 0x55e18e1205cb - core::ops::function::FnOnce::call_once::hde4a53e86e938555 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55e18e11fcae - std::sys_common::backtrace::__rust_begin_short_backtrace::ha622d61cd92bdac2 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55e18e1204d1 - std::rt::lang_start::{{closure}}::hdab94e9875c2e8f9 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:63:18 [INFO] [stderr] 21: 0x55e18e67307a - core::ops::function::impls:: for &F>::call_once::hccffb0872f46e99d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55e18e67307a - std::panicking::try::do_call::h814e0410256bb9f2 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x55e18e67307a - std::panicking::try::h97cbec2057cc2c0d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x55e18e67307a - std::panic::catch_unwind::h964f35f6fa41d1d7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panic.rs:434:14 [INFO] [stderr] 25: 0x55e18e67307a - std::rt::lang_start_internal::{{closure}}::hb97931cf27086d8b [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:45:48 [INFO] [stderr] 26: 0x55e18e67307a - std::panicking::try::do_call::hf0d61be342e8297a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 27: 0x55e18e67307a - std::panicking::try::h6b40eeb22db57b23 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 28: 0x55e18e67307a - std::panic::catch_unwind::h425af95fffdb0cf5 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panic.rs:434:14 [INFO] [stderr] 29: 0x55e18e67307a - std::rt::lang_start_internal::h21e355575f2fedc7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:45:20 [INFO] [stderr] 30: 0x55e18e1204a0 - std::rt::lang_start::h2f374753ee6ef858 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:62:5 [INFO] [stderr] 31: 0x55e18e11f4dc - main [INFO] [stderr] 32: 0x7f624ac310b3 - __libc_start_main [INFO] [stderr] 33: 0x55e18e11e11e - _start [INFO] [stderr] 34: 0x0 - [INFO] running `Command { std: "docker" "inspect" "1578f5c46a5bd8c7e1a494d791df89cde4a8ddad12466e3bc6e1860419ed9bb9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1578f5c46a5bd8c7e1a494d791df89cde4a8ddad12466e3bc6e1860419ed9bb9", kill_on_drop: false }` [INFO] [stdout] 1578f5c46a5bd8c7e1a494d791df89cde4a8ddad12466e3bc6e1860419ed9bb9