[INFO] fetching crate arctk 1.1.4... [INFO] checking arctk-1.1.4 against master#90442458ac46b1d5eed752c316da25450f67285b for pr-81477 [INFO] extracting crate arctk 1.1.4 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate arctk 1.1.4 on toolchain 90442458ac46b1d5eed752c316da25450f67285b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate arctk 1.1.4 [INFO] finished tweaking crates.io crate arctk 1.1.4 [INFO] tweaked toml for crates.io crate arctk 1.1.4 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate crates.io crate arctk 1.1.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ea7d7bff36b2ba8ce4de8bba1d2dea90376bc481f1a945a913994a8c492e40c1" "/opt/rustwide/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7897bbed5a64cde389e9fef465aa64dc13acd20b7a6d52203145908473732d48 [INFO] running `Command { std: "docker" "start" "-a" "7897bbed5a64cde389e9fef465aa64dc13acd20b7a6d52203145908473732d48", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7897bbed5a64cde389e9fef465aa64dc13acd20b7a6d52203145908473732d48", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7897bbed5a64cde389e9fef465aa64dc13acd20b7a6d52203145908473732d48", kill_on_drop: false }` [INFO] [stdout] 7897bbed5a64cde389e9fef465aa64dc13acd20b7a6d52203145908473732d48 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ea7d7bff36b2ba8ce4de8bba1d2dea90376bc481f1a945a913994a8c492e40c1" "/opt/rustwide/cargo-home/bin/cargo" "+90442458ac46b1d5eed752c316da25450f67285b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 628b4cee36d116dafb8ad286ab19f9c3fd54eff517cecf21491268e848e0626d [INFO] running `Command { std: "docker" "start" "-a" "628b4cee36d116dafb8ad286ab19f9c3fd54eff517cecf21491268e848e0626d", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling syn v1.0.71 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling regex-syntax v0.6.23 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling siphasher v0.3.5 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Compiling netcdf-sys v0.3.5 [INFO] [stderr] Checking adler32 v1.2.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Checking bytemuck v1.5.1 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking hashbrown v0.9.1 [INFO] [stderr] Checking number_prefix v0.4.0 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking hex v0.4.3 [INFO] [stderr] Checking slice-of-array v0.3.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling memoffset v0.6.3 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling indexmap v1.6.2 [INFO] [stderr] Compiling libloading v0.6.7 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Checking matrixmultiply v0.3.1 [INFO] [stderr] Checking matrixmultiply v0.2.4 [INFO] [stderr] Checking miniz_oxide v0.3.7 [INFO] [stderr] Checking libc v0.2.94 [INFO] [stderr] Checking matrixmultiply v0.1.15 [INFO] [stderr] Checking crc32fast v1.2.1 [INFO] [stderr] Checking ryu v1.0.5 [INFO] [stderr] Checking typenum v1.13.0 [INFO] [stderr] Checking rgb v0.8.27 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking itertools v0.10.0 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Checking deflate v0.8.6 [INFO] [stderr] Checking phf v0.8.0 [INFO] [stderr] Checking ansi_rgb v0.2.0 [INFO] [stderr] Checking png v0.16.8 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking getrandom v0.2.2 [INFO] [stderr] Checking terminal_size v0.1.16 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking rand_core v0.6.2 [INFO] [stderr] Checking crossbeam-epoch v0.9.3 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Checking rand_chacha v0.3.0 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Checking rand v0.8.3 [INFO] [stderr] Checking approx v0.5.0 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking noisy_float v0.2.0 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Compiling regex v1.4.6 [INFO] [stderr] Checking ndarray-parallel v0.9.1 [INFO] [stderr] Checking console v0.14.1 [INFO] [stderr] Compiling pest_generator v2.1.3 [INFO] [stderr] Checking indicatif v0.16.0 [INFO] [stderr] Compiling hdf5-sys v0.7.1 [INFO] [stderr] Compiling physical_constants v0.4.1 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Compiling palette_derive v0.5.0 [INFO] [stderr] Compiling pest_derive v2.1.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling arctk-attr v0.3.1 [INFO] [stderr] Compiling arctk-proc v0.4.3 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-9b1a7af41ba2854e/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55c47bc30020 - std::backtrace_rs::backtrace::libunwind::trace::h4e80f45db05e9df0 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55c47bc30020 - std::backtrace_rs::backtrace::trace_unsynchronized::h9db62a3d3587f6c3 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55c47bc30020 - std::sys_common::backtrace::_print_fmt::h2fafbe52c9090591 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55c47bc30020 - ::fmt::h7d41ae04358c516d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55c47bc4e84c - core::fmt::write::h968e6400cbc51d6a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x55c47bc2d435 - std::io::Write::write_fmt::h2eaa97c6f8c9e829 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/io/mod.rs:1642:15 [INFO] [stderr] 6: 0x55c47bc3208b - std::sys_common::backtrace::_print::h601a6bc581f240d5 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55c47bc3208b - std::sys_common::backtrace::print::h8b96e15ba64b8e64 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55c47bc3208b - std::panicking::default_hook::{{closure}}::h94fa9d2f08c20620 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55c47bc31b61 - std::panicking::default_hook::h6d463f5a2e9d9986 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55c47bc32754 - std::panicking::rust_panic_with_hook::h1e953652a338573e [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55c47ba655c3 - std::panicking::begin_panic::{{closure}}::h70564cf5bef47436 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x55c47ba60859 - std::sys_common::backtrace::__rust_end_short_backtrace::h0884eea295f946a1 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55c47ba654f9 - std::panicking::begin_panic::h4c24e83f9bc31714 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x55c47ba35ea7 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h23b17b4a60c85bca [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] 15: 0x55c47ba376cb - build_script_build::main::hd6143be3ce293b5a [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:647:9 [INFO] [stderr] 16: 0x55c47ba3b41b - core::ops::function::FnOnce::call_once::h60421bb80d31363d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55c47ba41a3e - std::sys_common::backtrace::__rust_begin_short_backtrace::hbfccda0e84b18e8e [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55c47ba3ff91 - std::rt::lang_start::{{closure}}::hbb49a16143eab02b [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x55c47bc32c5a - core::ops::function::impls:: for &F>::call_once::hccffb0872f46e99d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55c47bc32c5a - std::panicking::try::do_call::h814e0410256bb9f2 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x55c47bc32c5a - std::panicking::try::h97cbec2057cc2c0d [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x55c47bc32c5a - std::panic::catch_unwind::h964f35f6fa41d1d7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x55c47bc32c5a - std::rt::lang_start_internal::{{closure}}::hb97931cf27086d8b [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x55c47bc32c5a - std::panicking::try::do_call::hf0d61be342e8297a [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 25: 0x55c47bc32c5a - std::panicking::try::h6b40eeb22db57b23 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 26: 0x55c47bc32c5a - std::panic::catch_unwind::h425af95fffdb0cf5 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/panic.rs:434:14 [INFO] [stderr] 27: 0x55c47bc32c5a - std::rt::lang_start_internal::h21e355575f2fedc7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x55c47ba3ff60 - std::rt::lang_start::h3627e325072f8ba7 [INFO] [stderr] at /rustc/90442458ac46b1d5eed752c316da25450f67285b/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x55c47ba38bbc - main [INFO] [stderr] 30: 0x7f8bf49af0b3 - __libc_start_main [INFO] [stderr] 31: 0x55c47ba30efe - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "628b4cee36d116dafb8ad286ab19f9c3fd54eff517cecf21491268e848e0626d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "628b4cee36d116dafb8ad286ab19f9c3fd54eff517cecf21491268e848e0626d", kill_on_drop: false }` [INFO] [stdout] 628b4cee36d116dafb8ad286ab19f9c3fd54eff517cecf21491268e848e0626d