[INFO] fetching crate velvet-core 0.3.3... [INFO] checking velvet-core-0.3.3 against try#82acd1d76add2232e19c1f0feb250d2a19ec6efe for pr-81213 [INFO] extracting crate velvet-core 0.3.3 into /workspace/builds/worker-14/source [INFO] validating manifest of crates.io crate velvet-core 0.3.3 on toolchain 82acd1d76add2232e19c1f0feb250d2a19ec6efe [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+82acd1d76add2232e19c1f0feb250d2a19ec6efe" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate velvet-core 0.3.3 [INFO] finished tweaking crates.io crate velvet-core 0.3.3 [INFO] tweaked toml for crates.io crate velvet-core 0.3.3 written to /workspace/builds/worker-14/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+82acd1d76add2232e19c1f0feb250d2a19ec6efe" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+82acd1d76add2232e19c1f0feb250d2a19ec6efe" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded console v0.14.0 [INFO] [stderr] Downloaded hdf5-sys v0.7.0 [INFO] [stderr] Downloaded hdf5-types v0.7.0 [INFO] [stderr] Downloaded typetag v0.1.6 [INFO] [stderr] Downloaded ascii v1.0.0 [INFO] [stderr] Downloaded velvet-core v0.3.3 [INFO] [stderr] Downloaded typetag-impl v0.1.6 [INFO] [stderr] Downloaded hdf5-derive v0.7.0 [INFO] [stderr] Downloaded velvet-convert v0.1.2 [INFO] [stderr] Downloaded vasp-poscar v0.3.2 [INFO] [stderr] Downloaded hdf5 v0.7.0 [INFO] [stderr] Downloaded nalgebra v0.23.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+82acd1d76add2232e19c1f0feb250d2a19ec6efe" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ec6ce79d1e6f2d93422ba42f89f7400bb53d5f9b8f1f08e1bf85cfed2a46833c [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ec6ce79d1e6f2d93422ba42f89f7400bb53d5f9b8f1f08e1bf85cfed2a46833c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ec6ce79d1e6f2d93422ba42f89f7400bb53d5f9b8f1f08e1bf85cfed2a46833c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ec6ce79d1e6f2d93422ba42f89f7400bb53d5f9b8f1f08e1bf85cfed2a46833c", kill_on_drop: false }` [INFO] [stdout] ec6ce79d1e6f2d93422ba42f89f7400bb53d5f9b8f1f08e1bf85cfed2a46833c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+82acd1d76add2232e19c1f0feb250d2a19ec6efe" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fcc2ac12ddb39b8c580da9a11d4efd83f29f1afd06033a773e74993bd74384f9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "fcc2ac12ddb39b8c580da9a11d4efd83f29f1afd06033a773e74993bd74384f9", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling serde_derive v1.0.121 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking once_cell v1.5.2 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Checking regex-syntax v0.6.22 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Compiling const_fn v0.4.5 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking smallvec v1.6.1 [INFO] [stderr] Checking termcolor v1.1.2 [INFO] [stderr] Compiling hdf5 v0.7.0 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling serde_json v1.0.61 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Checking strum v0.20.0 [INFO] [stderr] Checking dtoa v0.4.7 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking half v1.7.1 [INFO] [stderr] Checking base64 v0.13.0 [INFO] [stderr] Checking oorandom v11.1.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling crossbeam-utils v0.8.1 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling libloading v0.6.7 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Checking lock_api v0.3.4 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking thread_local v1.1.1 [INFO] [stderr] Checking walkdir v2.3.1 [INFO] [stderr] Checking log v0.4.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking parking_lot_core v0.7.2 [INFO] [stderr] Checking hdf5-types v0.7.0 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Compiling cast v0.2.3 [INFO] [stderr] Checking backtrace v0.3.56 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Compiling inventory-impl v0.1.10 [INFO] [stderr] Compiling ghost v0.1.2 [INFO] [stderr] Compiling ctor v0.1.18 [INFO] [stderr] Compiling hdf5-derive v0.7.0 [INFO] [stderr] Compiling typetag-impl v0.1.6 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking parking_lot v0.10.2 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling failure_derive v0.1.8 [INFO] [stderr] Compiling regex v1.4.3 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking crossbeam-epoch v0.9.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking criterion-plot v0.4.3 [INFO] [stderr] Checking inventory v0.1.10 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Checking rand_distr v0.3.0 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking ndarray v0.13.1 [INFO] [stderr] Checking failure v0.1.8 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Checking console v0.14.0 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking vasp-poscar v0.3.2 [INFO] [stderr] Checking pretty_env_logger v0.4.0 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-e28779717ad29bf4/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55e73c2f7da7 - std::backtrace_rs::backtrace::libunwind::trace::h8bc78f7bc1f75bdb [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55e73c2f7da7 - std::backtrace_rs::backtrace::trace_unsynchronized::ha4c961c9576f95ba [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55e73c2f7da7 - std::sys_common::backtrace::_print_fmt::hc20cfdc233d6eb02 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55e73c2f7da7 - ::fmt::h04bea14549780a0f [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55e73c313d9c - core::fmt::write::h3868db8542c90941 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/core/src/fmt/mod.rs:1096:17 [INFO] [stderr] 5: 0x55e73c2f4782 - std::io::Write::write_fmt::h55dd75636eef6a5c [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/io/mod.rs:1568:15 [INFO] [stderr] 6: 0x55e73c2f9e35 - std::sys_common::backtrace::_print::h6439e8525077c7da [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55e73c2f9e35 - std::sys_common::backtrace::print::h02b685f728ce3931 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55e73c2f9e35 - std::panicking::default_hook::{{closure}}::h7c29625065fafae1 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55e73c2f9993 - std::panicking::default_hook::hba441710bb71f4d5 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55e73c2fa5d1 - std::panicking::rust_panic_with_hook::ha936eb00e51bc4d9 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x55e73c1cdbde - std::panicking::begin_panic::{{closure}}::hc6ea579b5d681a2f [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x55e73c1ce309 - std::sys_common::backtrace::__rust_end_short_backtrace::h2b031500d6751ac5 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55e73c1cdb0b - std::panicking::begin_panic::hc8702e33ece643e5 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x55e73c0cd23b - build_script_build::LibrarySearcher::try_locate_hdf5_library::h1fb63d79b332bd61 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x55e73c0ceb15 - build_script_build::main::habebe683fc6f4551 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x55e73c0d19ab - core::ops::function::FnOnce::call_once::hb8fe191cf1651927 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55e73c0d361e - std::sys_common::backtrace::__rust_begin_short_backtrace::h5b8cd3e6caa2ecfd [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55e73c0daee1 - std::rt::lang_start::{{closure}}::hd4e92087e2889a11 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x55e73c2fa9f7 - core::ops::function::impls:: for &F>::call_once::h7c92107c3c98a949 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55e73c2fa9f7 - std::panicking::try::do_call::h7454c57e8fbf0cc1 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x55e73c2fa9f7 - std::panicking::try::he71cdc15ed83b5ec [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x55e73c2fa9f7 - std::panic::catch_unwind::hfc08ddb043e6e18c [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/panic.rs:396:14 [INFO] [stderr] 23: 0x55e73c2fa9f7 - std::rt::lang_start_internal::he4958117ec6901fd [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x55e73c0daeb7 - std::rt::lang_start::h4903af97b1882d36 [INFO] [stderr] at /rustc/82acd1d76add2232e19c1f0feb250d2a19ec6efe/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x55e73c0d015a - main [INFO] [stderr] 26: 0x7f21c8b4d0b3 - __libc_start_main [INFO] [stderr] 27: 0x55e73c0c80be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "fcc2ac12ddb39b8c580da9a11d4efd83f29f1afd06033a773e74993bd74384f9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fcc2ac12ddb39b8c580da9a11d4efd83f29f1afd06033a773e74993bd74384f9", kill_on_drop: false }` [INFO] [stdout] fcc2ac12ddb39b8c580da9a11d4efd83f29f1afd06033a773e74993bd74384f9