[INFO] fetching crate d4utils 0.1.16... [INFO] checking d4utils-0.1.16 against try#9cfe725f0995b018340c519db1b2f3cf8a7e0631 for pr-81174 [INFO] extracting crate d4utils 0.1.16 into /workspace/builds/worker-10/source [INFO] validating manifest of crates.io crate d4utils 0.1.16 on toolchain 9cfe725f0995b018340c519db1b2f3cf8a7e0631 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9cfe725f0995b018340c519db1b2f3cf8a7e0631" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4utils 0.1.16 [INFO] finished tweaking crates.io crate d4utils 0.1.16 [INFO] tweaked toml for crates.io crate d4utils 0.1.16 written to /workspace/builds/worker-10/source/Cargo.toml [INFO] crate crates.io crate d4utils 0.1.16 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9cfe725f0995b018340c519db1b2f3cf8a7e0631" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded cpuprofiler v0.0.4 [INFO] [stderr] Downloaded d4-framefile v0.1.16 [INFO] [stderr] Downloaded d4-hts v0.1.16 [INFO] [stderr] Downloaded d4-bigwig v0.1.16 [INFO] [stderr] Downloaded d4 v0.1.16 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+9cfe725f0995b018340c519db1b2f3cf8a7e0631" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6540b69a0e32858925f8e65ad8d77f45a0910d6dd834612914c078c352c1d5fa [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6540b69a0e32858925f8e65ad8d77f45a0910d6dd834612914c078c352c1d5fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6540b69a0e32858925f8e65ad8d77f45a0910d6dd834612914c078c352c1d5fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6540b69a0e32858925f8e65ad8d77f45a0910d6dd834612914c078c352c1d5fa", kill_on_drop: false }` [INFO] [stdout] 6540b69a0e32858925f8e65ad8d77f45a0910d6dd834612914c078c352c1d5fa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:21f1ed92105a0ef9b0d27ad8bdeb7f36f9f01ac17fffe3a3f3dc5241fc25d8f4" "/opt/rustwide/cargo-home/bin/cargo" "+9cfe725f0995b018340c519db1b2f3cf8a7e0631" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 22c6640dbdbbe6518a48411e8315d470ece633c901aaa808b759ff3abf21f33e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "22c6640dbdbbe6518a48411e8315d470ece633c901aaa808b759ff3abf21f33e", kill_on_drop: false }` [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling syn v1.0.53 [INFO] [stderr] Checking termcolor v1.1.2 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling miniz_oxide v0.4.3 [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Checking crc32fast v1.2.1 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Checking crossbeam-utils v0.8.1 [INFO] [stderr] Checking serde_json v1.0.59 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Checking crossbeam-epoch v0.9.1 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clang-sys v1.0.3 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking flate2 v1.0.19 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Checking d4-framefile v0.1.16 [INFO] [stderr] Checking rayon v1.5.0 [INFO] [stderr] Checking regex v1.4.2 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling d4-hts v0.1.16 [INFO] [stderr] Compiling d4-bigwig v0.1.16 [INFO] [stderr] error: failed to run custom build command for `d4-bigwig v0.1.16` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-bigwig-f084f227468aa938/build-script-build` (exit code: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + cd /opt/rustwide/target/debug/build/d4-bigwig-8196412b2c11e3c4/out [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-bigwig-8196412b2c11e3c4/out/libBigWig [INFO] [stderr] + git clone -b 0.4.4 https://github.com/dpryan79/libBigWig [INFO] [stderr] Cloning into 'libBigWig'... [INFO] [stderr] fatal: unable to access 'https://github.com/dpryan79/libBigWig/': Could not resolve host: github.com [INFO] [stderr] + cd libBigWig [INFO] [stderr] build-lib.sh: line 12: cd: libBigWig: No such file or directory [INFO] [stderr] + perl -i -pe s/-lcurl//g Makefile [INFO] [stderr] Can't open Makefile: No such file or directory. [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] ++ grep musl [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + curl https://zlib.net/zlib-1.2.11.tar.gz [INFO] [stderr] + tar xz [INFO] [stderr] % Total % Received % Xferd Average Speed Time Time Time Current [INFO] [stderr] Dload Upload Total Spent Left Speed [INFO] [stderr] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0curl: (6) Could not resolve host: zlib.net [INFO] [stderr] [INFO] [stderr] gzip: stdin: unexpected end of file [INFO] [stderr] tar: Child returned status 1 [INFO] [stderr] tar: Error is not recoverable: exiting now [INFO] [stderr] + cd zlib-1.2.11 [INFO] [stderr] build-lib.sh: line 29: cd: zlib-1.2.11: No such file or directory [INFO] [stderr] + is_musl [INFO] [stderr] ++ grep musl [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + return 1 [INFO] [stderr] + ./configure [INFO] [stderr] build-lib.sh: line 30: ./configure: No such file or directory [INFO] [stderr] + make [INFO] [stderr] make: *** No targets specified and no makefile found. Stop. [INFO] [stderr] + cp libz.a .. [INFO] [stderr] cp: cannot stat 'libz.a': No such file or directory [INFO] [stderr] + cd .. [INFO] [stderr] + CFLAGS='-DNOCURL -O3 -Izlib-1.2.11' [INFO] [stderr] + make -j8 lib-static [INFO] [stderr] make: *** No rule to make target 'lib-static'. Stop. [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build-lib.sh\", lib_root.to_str().unwrap(),\n \"0.4.4\"]).spawn().expect(\"Unable to build libBigWig\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.16/build.rs:25:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x56172aa42227 - std::backtrace_rs::backtrace::libunwind::trace::h8bc78f7bc1f75bdb [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x56172aa42227 - std::backtrace_rs::backtrace::trace_unsynchronized::ha4c961c9576f95ba [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x56172aa42227 - std::sys_common::backtrace::_print_fmt::hc20cfdc233d6eb02 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x56172aa42227 - ::fmt::h04bea14549780a0f [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x56172aa64b2c - core::fmt::write::h3868db8542c90941 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/core/src/fmt/mod.rs:1096:17 [INFO] [stderr] 5: 0x56172aa3e542 - std::io::Write::write_fmt::h55dd75636eef6a5c [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/io/mod.rs:1568:15 [INFO] [stderr] 6: 0x56172aa445b5 - std::sys_common::backtrace::_print::h6439e8525077c7da [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x56172aa445b5 - std::sys_common::backtrace::print::h02b685f728ce3931 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x56172aa445b5 - std::panicking::default_hook::{{closure}}::h7c29625065fafae1 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x56172aa44113 - std::panicking::default_hook::hba441710bb71f4d5 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x56172aa44d51 - std::panicking::rust_panic_with_hook::ha936eb00e51bc4d9 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x56172aa44867 - std::panicking::begin_panic_handler::{{closure}}::hcd15140e0238536e [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x56172aa426ec - std::sys_common::backtrace::__rust_end_short_backtrace::hb13a021bb64823a1 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x56172aa447f9 - rust_begin_unwind [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x56172aa63211 - core::panicking::panic_fmt::h20225113c4a2f8fd [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x56172aa6315d - core::panicking::panic::h35b77276aa4b0c12 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x56172a4a691a - build_script_build::main::h8ceb6d66efb6e7d7 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.16/build.rs:25:5 [INFO] [stderr] 17: 0x56172a4a734b - core::ops::function::FnOnce::call_once::he7b782c8e951ff95 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 18: 0x56172a4a726e - std::sys_common::backtrace::__rust_begin_short_backtrace::hc5e48a33c95b68d2 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 19: 0x56172a4a7621 - std::rt::lang_start::{{closure}}::h147cc197f13ad8d5 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/rt.rs:66:18 [INFO] [stderr] 20: 0x56172aa45267 - core::ops::function::impls:: for &F>::call_once::h7c92107c3c98a949 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 21: 0x56172aa45267 - std::panicking::try::do_call::h7454c57e8fbf0cc1 [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:379:40 [INFO] [stderr] 22: 0x56172aa45267 - std::panicking::try::he71cdc15ed83b5ec [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panicking.rs:343:19 [INFO] [stderr] 23: 0x56172aa45267 - std::panic::catch_unwind::hfc08ddb043e6e18c [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/panic.rs:396:14 [INFO] [stderr] 24: 0x56172aa45267 - std::rt::lang_start_internal::he4958117ec6901fd [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/rt.rs:51:25 [INFO] [stderr] 25: 0x56172a4a75f7 - std::rt::lang_start::he5c0f2a5da13727d [INFO] [stderr] at /rustc/9cfe725f0995b018340c519db1b2f3cf8a7e0631/library/std/src/rt.rs:65:5 [INFO] [stderr] 26: 0x56172a4a6bea - main [INFO] [stderr] 27: 0x7f199bb270b3 - __libc_start_main [INFO] [stderr] 28: 0x56172a4a60be - _start [INFO] [stderr] 29: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "22c6640dbdbbe6518a48411e8315d470ece633c901aaa808b759ff3abf21f33e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "22c6640dbdbbe6518a48411e8315d470ece633c901aaa808b759ff3abf21f33e", kill_on_drop: false }` [INFO] [stdout] 22c6640dbdbbe6518a48411e8315d470ece633c901aaa808b759ff3abf21f33e