[INFO] fetching crate rust-htslib 0.35.2... [INFO] checking rust-htslib-0.35.2 against try#575650af7d7ca88602df28e39d27bf3e456c306e for pr-80579 [INFO] extracting crate rust-htslib 0.35.2 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate rust-htslib 0.35.2 on toolchain 575650af7d7ca88602df28e39d27bf3e456c306e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+575650af7d7ca88602df28e39d27bf3e456c306e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-0/source/.cargo/config [INFO] started tweaking crates.io crate rust-htslib 0.35.2 [INFO] finished tweaking crates.io crate rust-htslib 0.35.2 [INFO] tweaked toml for crates.io crate rust-htslib 0.35.2 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+575650af7d7ca88602df28e39d27bf3e456c306e" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+575650af7d7ca88602df28e39d27bf3e456c306e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded bio-types v0.7.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded hts-sys v1.11.1-fix1 [INFO] [stderr] Downloaded libdeflate-sys v0.5.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+575650af7d7ca88602df28e39d27bf3e456c306e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 44358f444a5d53849e012b9f34272982a4f41e18bd5c77e8ad224ff7ceeb8a61 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "44358f444a5d53849e012b9f34272982a4f41e18bd5c77e8ad224ff7ceeb8a61", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "44358f444a5d53849e012b9f34272982a4f41e18bd5c77e8ad224ff7ceeb8a61", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "44358f444a5d53849e012b9f34272982a4f41e18bd5c77e8ad224ff7ceeb8a61", kill_on_drop: false }` [INFO] [stdout] 44358f444a5d53849e012b9f34272982a4f41e18bd5c77e8ad224ff7ceeb8a61 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+575650af7d7ca88602df28e39d27bf3e456c306e" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6f35bf6fadc02b330c1521f013e9aef273d3f0dabc8ae6128be9ee41b6d4a420 [INFO] running `Command { std: "docker" "start" "-a" "6f35bf6fadc02b330c1521f013e9aef273d3f0dabc8ae6128be9ee41b6d4a420", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.81 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling serde v1.0.118 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling serde_derive v1.0.118 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Checking regex-syntax v0.6.21 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling serde_json v1.0.61 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking remove_dir_all v0.5.3 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking difference v2.0.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking idna v0.2.0 [INFO] [stderr] Checking pretty_assertions v0.6.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Compiling quote v1.0.8 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Checking url v2.2.0 [INFO] [stderr] Compiling syn v1.0.56 [INFO] [stderr] Compiling cc v1.0.66 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling openssl-src v111.13.0+1.1.1i [INFO] [stderr] Compiling openssl-sys v0.9.60 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.39+curl-7.74.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 [INFO] [stderr] Checking regex v1.4.2 [INFO] [stderr] Checking tempfile v3.1.0 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Checking bincode v1.3.1 [INFO] [stderr] Compiling thiserror-impl v1.0.23 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Checking thiserror v1.0.23 [INFO] [stderr] Checking bio-types v0.7.0 [INFO] [stderr] Checking rust-htslib v0.35.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bcf/mod.rs:833:17 [INFO] [stdout] | [INFO] [stdout] 833 | let mut fmt = record.format(b"PL"); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bcf/mod.rs:926:17 [INFO] [stdout] | [INFO] [stdout] 926 | let mut record = rec.expect("Error reading record."); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bcf/mod.rs:969:17 [INFO] [stdout] | [INFO] [stdout] 969 | let mut record = rec.expect("Error reading record."); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bcf/mod.rs:999:17 [INFO] [stdout] | [INFO] [stdout] 999 | let mut rec = rec.expect("Error reading record."); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bcf/mod.rs:1419:13 [INFO] [stdout] | [INFO] [stdout] 1419 | let mut first_record = bcf.records().next().unwrap().expect("Fail to read record"); [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 17s [INFO] running `Command { std: "docker" "inspect" "6f35bf6fadc02b330c1521f013e9aef273d3f0dabc8ae6128be9ee41b6d4a420", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6f35bf6fadc02b330c1521f013e9aef273d3f0dabc8ae6128be9ee41b6d4a420", kill_on_drop: false }` [INFO] [stdout] 6f35bf6fadc02b330c1521f013e9aef273d3f0dabc8ae6128be9ee41b6d4a420