[INFO] fetching crate omics-tools 0.1.0...
[INFO] checking omics-tools-0.1.0 against master#a609fb45efad59dfd459c76e50899be9f0583b5a for pr-80579
[INFO] extracting crate omics-tools 0.1.0 into /workspace/builds/worker-7/source
[INFO] validating manifest of crates.io crate omics-tools 0.1.0 on toolchain a609fb45efad59dfd459c76e50899be9f0583b5a
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate omics-tools 0.1.0
[INFO] finished tweaking crates.io crate omics-tools 0.1.0
[INFO] tweaked toml for crates.io crate omics-tools 0.1.0 written to /workspace/builds/worker-7/source/Cargo.toml
[INFO] crate crates.io crate omics-tools 0.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b431563ab68f1586b79e4546dd27098d6e76301a8105f8ecc9e1fdadc4783dc6
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b431563ab68f1586b79e4546dd27098d6e76301a8105f8ecc9e1fdadc4783dc6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b431563ab68f1586b79e4546dd27098d6e76301a8105f8ecc9e1fdadc4783dc6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b431563ab68f1586b79e4546dd27098d6e76301a8105f8ecc9e1fdadc4783dc6", kill_on_drop: false }`
[INFO] [stdout] b431563ab68f1586b79e4546dd27098d6e76301a8105f8ecc9e1fdadc4783dc6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c242777861ab48f444745f494ef8f19dc98895453216b5fc143979a2dfdef095
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "c242777861ab48f444745f494ef8f19dc98895453216b5fc143979a2dfdef095", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling syn v1.0.40
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]    Compiling version_check v0.9.2
[INFO] [stderr]    Compiling maybe-uninit v2.0.0
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling serde v1.0.116
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]     Checking tinyvec v0.3.4
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling rayon-core v1.8.0
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]     Checking regex-syntax v0.6.18
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking termcolor v1.1.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking either v1.6.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking exitcode v1.1.2
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking unreachable v1.0.0
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling proc-macro2 v1.0.21
[INFO] [stderr]     Checking unicode-normalization v0.1.13
[INFO] [stderr]     Checking atty v0.2.11
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]     Checking thread_local v0.3.4
[INFO] [stderr]     Checking clap v2.33.3
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking aho-corasick v0.7.13
[INFO] [stderr]    Compiling crossbeam-utils v0.7.2
[INFO] [stderr]    Compiling memoffset v0.5.5
[INFO] [stderr]    Compiling crossbeam-epoch v0.8.2
[INFO] [stderr]    Compiling num-traits v0.2.12
[INFO] [stderr]    Compiling num-integer v0.1.43
[INFO] [stderr]    Compiling rayon v1.4.0
[INFO] [stderr]    Compiling quote v1.0.7
[INFO] [stderr]    Compiling openssl-src v111.10.2+1.1.1g
[INFO] [stderr]     Checking idna v0.2.0
[INFO] [stderr]     Checking crossbeam-channel v0.4.4
[INFO] [stderr]    Compiling openssl-sys v0.9.58
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling hts-sys v1.10.3
[INFO] [stderr]     Checking crossbeam-deque v0.7.3
[INFO] [stderr]     Checking url v2.1.1
[INFO] [stderr]     Checking chrono v0.4.15
[INFO] [stderr]     Checking regex v1.3.9
[INFO] [stderr]     Checking stderrlog v0.4.3
[INFO] [stderr]    Compiling serde_derive v1.0.116
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.20
[INFO] [stderr]    Compiling structopt-derive v0.4.10
[INFO] [stderr]     Checking thiserror v1.0.20
[INFO] [stderr]     Checking structopt v0.3.17
[INFO] [stderr]     Checking bio-types v0.7.0
[INFO] [stderr]     Checking rust-htslib v0.32.0
[INFO] [stderr]     Checking omics-tools v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/bin/bam-util.rs:1:1
[INFO] [stdout]   |
[INFO] [stdout] 1 | #[macro_use]
[INFO] [stdout]   | ^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/bin/bam-util.rs:1:1
[INFO] [stdout]   |
[INFO] [stdout] 1 | #[macro_use]
[INFO] [stdout]   | ^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 31s
[INFO] running `Command { std: "docker" "inspect" "c242777861ab48f444745f494ef8f19dc98895453216b5fc143979a2dfdef095", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c242777861ab48f444745f494ef8f19dc98895453216b5fc143979a2dfdef095", kill_on_drop: false }`
[INFO] [stdout] c242777861ab48f444745f494ef8f19dc98895453216b5fc143979a2dfdef095