[INFO] fetching crate consprob 0.1.2... [INFO] checking consprob-0.1.2 against master#a609fb45efad59dfd459c76e50899be9f0583b5a for pr-80579 [INFO] extracting crate consprob 0.1.2 into /workspace/builds/worker-2/source [INFO] validating manifest of crates.io crate consprob 0.1.2 on toolchain a609fb45efad59dfd459c76e50899be9f0583b5a [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate consprob 0.1.2 [INFO] finished tweaking crates.io crate consprob 0.1.2 [INFO] tweaked toml for crates.io crate consprob 0.1.2 written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate crates.io crate consprob 0.1.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f1de165f0a524afbbc79df5c0a07d778ac46051ecb62f5d12da80797e4c2a098 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "f1de165f0a524afbbc79df5c0a07d778ac46051ecb62f5d12da80797e4c2a098", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f1de165f0a524afbbc79df5c0a07d778ac46051ecb62f5d12da80797e4c2a098", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f1de165f0a524afbbc79df5c0a07d778ac46051ecb62f5d12da80797e4c2a098", kill_on_drop: false }` [INFO] [stdout] f1de165f0a524afbbc79df5c0a07d778ac46051ecb62f5d12da80797e4c2a098 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e5e35d82db487d869902c8707cc8b40e27b26148564540a29bc78e8ae8466acb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e5e35d82db487d869902c8707cc8b40e27b26148564540a29bc78e8ae8466acb", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling syn v1.0.54 [INFO] [stderr] Compiling serde_derive v1.0.118 [INFO] [stderr] Compiling serde v1.0.118 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.9.1 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking ucd-util v0.1.8 [INFO] [stderr] Checking void v1.0.2 [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Checking utf8-ranges v1.0.4 [INFO] [stderr] Checking bit-vec v0.4.4 [INFO] [stderr] Checking hashbrown v0.3.1 [INFO] [stderr] Checking lazy_static v0.2.11 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Checking regex-syntax v0.5.6 [INFO] [stderr] Checking unreachable v1.0.0 [INFO] [stderr] Checking itertools v0.6.5 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking bit-set v0.4.0 [INFO] [stderr] Checking time v0.1.44 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.1 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking aho-corasick v0.6.10 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking bio-seq-algos v0.1.17 [INFO] [stderr] Checking rna-ss-params v0.1.18 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking num-traits v0.1.43 [INFO] [stderr] Checking num-complex v0.1.43 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking ordered-float v0.5.2 [INFO] [stderr] Checking num v0.3.1 [INFO] [stderr] Checking bstr v0.2.14 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking csv v1.1.5 [INFO] [stderr] Checking bio v0.20.3 [INFO] [stderr] Checking rna-algos v0.1.17 [INFO] [stderr] Checking consprob v0.1.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 47.17s [INFO] running `Command { std: "docker" "inspect" "e5e35d82db487d869902c8707cc8b40e27b26148564540a29bc78e8ae8466acb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e5e35d82db487d869902c8707cc8b40e27b26148564540a29bc78e8ae8466acb", kill_on_drop: false }` [INFO] [stdout] e5e35d82db487d869902c8707cc8b40e27b26148564540a29bc78e8ae8466acb